RNA–Protein interactions for RNA: ENST00000288723.8

RAB28-201, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RAB28, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-201ENST00000288723 PRO0628Q9UI54 55 aa9.61□□□□□ -0.87
RAB28-201ENST00000288723 CYP4F30PQ9H0H9 118 aa9.59□□□□□ -0.87
RAB28-201ENST00000288723 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.88
RAB28-201ENST00000288723 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.88
RAB28-201ENST00000288723 S4R3F8 94 aa9.56□□□□□ -0.88
RAB28-201ENST00000288723 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
RAB28-201ENST00000288723 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
RAB28-201ENST00000288723 SMIM26A0A096LP01 95 aa9.54□□□□□ -0.88
RAB28-201ENST00000288723 H7BZZ5 65 aa9.54□□□□□ -0.88
RAB28-201ENST00000288723 KRTAP19-1Q8IUB9 90 aa9.54□□□□□ -0.88
RAB28-201ENST00000288723 NDUFC1O43677 76 aa9.53□□□□□ -0.88
RAB28-201ENST00000288723 ATP5EP56381 51 aaPredicted RBP9.53□□□□□ -0.88
RAB28-201ENST00000288723 LCA10Q71F78 164 aa9.52□□□□□ -0.89
RAB28-201ENST00000288723 LOC101927531A0A1B0GV80 90 aa9.52□□□□□ -0.89
RAB28-201ENST00000288723 FCGBPQ9Y6R7 5405 aaPredicted RBP9.48□□□□□ -0.89
RAB28-201ENST00000288723 H0Y9P7 68 aa9.48□□□□□ -0.89
RAB28-201ENST00000288723 CSAG1Q6PB30 78 aa9.47□□□□□ -0.89
RAB28-201ENST00000288723 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.41□□□□□ -0.9
RAB28-201ENST00000288723 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
RAB28-201ENST00000288723 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
RAB28-201ENST00000288723 LINC00208Q96KT6 92 aa9.35□□□□□ -0.91
RAB28-201ENST00000288723 OCR1Q9BZK8 76 aa9.35□□□□□ -0.91
RAB28-201ENST00000288723 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
RAB28-201ENST00000288723 MP68P56378 58 aa9.28□□□□□ -0.92
RAB28-201ENST00000288723 V9GYY9 64 aa9.26□□□□□ -0.93
RAB28-201ENST00000288723 KRTAP9-7A8MTY7 169 aa9.26□□□□□ -0.93
RAB28-201ENST00000288723 BRK1Q8WUW1 75 aa9.26□□□□□ -0.93
RAB28-201ENST00000288723 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
RAB28-201ENST00000288723 A8MUN3 132 aa9.19□□□□□ -0.94
RAB28-201ENST00000288723 SEC61GP60059 68 aa9.19□□□□□ -0.94
RAB28-201ENST00000288723 MACF1Q9UPN3 7388 aaKnown RBP9.17□□□□□ -0.94
RAB28-201ENST00000288723 MT1BP07438 61 aa9.15□□□□□ -0.94
RAB28-201ENST00000288723 H3BPC8 53 aa9.12□□□□□ -0.95
RAB28-201ENST00000288723 KRTAP19-8Q3LI54 63 aa9.12□□□□□ -0.95
RAB28-201ENST00000288723 Q5VV11 94 aa9.12□□□□□ -0.95
RAB28-201ENST00000288723 Q1T7F1 81 aa9.12□□□□□ -0.95
RAB28-201ENST00000288723 SYNE2Q8WXH0 6885 aaKnown RBP9.08□□□□□ -0.96
RAB28-201ENST00000288723 H0YAA0 97 aa9.05□□□□□ -0.96
RAB28-201ENST00000288723 PMAIP1Q13794 54 aa9.05□□□□□ -0.96
RAB28-201ENST00000288723 CRIPTQ9P021 101 aa9.05□□□□□ -0.96
RAB28-201ENST00000288723 ADM2Q7Z4H4 148 aa9.03□□□□□ -0.96
RAB28-201ENST00000288723 DMAC1Q96GE9 116 aa9.01□□□□□ -0.97
RAB28-201ENST00000288723 A6NN06 94 aa9□□□□□ -0.97
RAB28-201ENST00000288723 KRTAP10-5P60370 271 aa8.89□□□□□ -0.99
RAB28-201ENST00000288723 P0C880 135 aa8.86□□□□□ -0.99
RAB28-201ENST00000288723 PSPHP1O15172 72 aa8.85□□□□□ -0.99
RAB28-201ENST00000288723 SPANXA2-OT1Q8N9U9 137 aa8.84□□□□□ -0.99
RAB28-201ENST00000288723 ACYP2P14621 99 aa8.81□□□□□ -1
RAB28-201ENST00000288723 KRTAP6-3Q3LI67 103 aa8.8□□□□□ -1
RAB28-201ENST00000288723 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
RAB28-201ENST00000288723 R4GN34 69 aa8.77□□□□□ -1
RAB28-201ENST00000288723 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
RAB28-201ENST00000288723 M0QZ58 72 aa8.73□□□□□ -1.01
RAB28-201ENST00000288723 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.01
RAB28-201ENST00000288723 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
RAB28-201ENST00000288723 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
RAB28-201ENST00000288723 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
RAB28-201ENST00000288723 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
RAB28-201ENST00000288723 MT1XP80297 61 aa8.61□□□□□ -1.03
RAB28-201ENST00000288723 CDC42SE1Q9NRR8 79 aa8.61□□□□□ -1.03
RAB28-201ENST00000288723 A8MU10 97 aa8.59□□□□□ -1.03
RAB28-201ENST00000288723 A6NED7 52 aa8.59□□□□□ -1.03
RAB28-201ENST00000288723 COA5Q86WW8 74 aa8.57□□□□□ -1.04
RAB28-201ENST00000288723 PRO2289Q9P1D8 64 aa8.57□□□□□ -1.04
RAB28-201ENST00000288723 LINC01558Q9Y6Z2 57 aa8.56□□□□□ -1.04
RAB28-201ENST00000288723 MUC12Q9UKN1 5478 aa8.52□□□□□ -1.05
RAB28-201ENST00000288723 KMT2DO14686 5537 aa8.47□□□□□ -1.05
RAB28-201ENST00000288723 KRTAP5-9P26371 169 aa8.45□□□□□ -1.06
RAB28-201ENST00000288723 NEBP20929 6669 aa8.44□□□□□ -1.06
RAB28-201ENST00000288723 KRTAP13-4Q3LI77 160 aa8.33□□□□□ -1.08
RAB28-201ENST00000288723 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
RAB28-201ENST00000288723 MDN1Q9NU22 5596 aa8.31□□□□□ -1.08
RAB28-201ENST00000288723 SPRR2FQ96RM1 72 aa8.27□□□□□ -1.09
RAB28-201ENST00000288723 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
RAB28-201ENST00000288723 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
RAB28-201ENST00000288723 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
RAB28-201ENST00000288723 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
RAB28-201ENST00000288723 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
RAB28-201ENST00000288723 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.1
RAB28-201ENST00000288723 SPRR2EP22531 72 aa8.12□□□□□ -1.11
RAB28-201ENST00000288723 SPRR2BP35325 72 aa8.12□□□□□ -1.11
RAB28-201ENST00000288723 SPRR2AP35326 72 aa8.12□□□□□ -1.11
RAB28-201ENST00000288723 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
RAB28-201ENST00000288723 PRAC1Q96KF2 57 aa8.1□□□□□ -1.11
RAB28-201ENST00000288723 A0A0D9SG42 100 aa8.09□□□□□ -1.11
RAB28-201ENST00000288723 A0A1B0GU69 56 aa8.09□□□□□ -1.11
RAB28-201ENST00000288723 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
RAB28-201ENST00000288723 A0A1B0GU33 70 aa8.06□□□□□ -1.12
RAB28-201ENST00000288723 UQCR11O14957 56 aa8.04□□□□□ -1.12
RAB28-201ENST00000288723 MIR22HGQ0VDD5 57 aa8.03□□□□□ -1.12
RAB28-201ENST00000288723 LCE1AQ5T7P2 110 aa8.03□□□□□ -1.12
RAB28-201ENST00000288723 SPINT4Q6UDR6 99 aa7.96□□□□□ -1.14
RAB28-201ENST00000288723 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
RAB28-201ENST00000288723 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
RAB28-201ENST00000288723 H3BS24 57 aa7.92□□□□□ -1.14
RAB28-201ENST00000288723 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
RAB28-201ENST00000288723 SPRR2DP22532 72 aa7.84□□□□□ -1.15
RAB28-201ENST00000288723 KRTAP19-7Q3SYF9 63 aa7.69□□□□□ -1.18
RAB28-201ENST00000288723 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
RAB28-201ENST00000288723 KRTAP2-2Q9BYT5 123 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms