RNA–Protein interactions for RNA: ENST00000283875.5

GTF2E1-201, Transcript of general transcription factor IIE subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2E1, Length 3,012 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2E1-201ENST00000283875 C14orf177Q52M58 125 aa4.04□□□□□ -1.76
GTF2E1-201ENST00000283875 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
GTF2E1-201ENST00000283875 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
GTF2E1-201ENST00000283875 CIRBP-AS1Q8TBR5 109 aa4□□□□□ -1.77
GTF2E1-201ENST00000283875 DMBT1Q9UGM3 2413 aaPredicted RBP4□□□□□ -1.77
GTF2E1-201ENST00000283875 COX6B2Q6YFQ2 88 aa4□□□□□ -1.77
GTF2E1-201ENST00000283875 APOBP04114 4563 aaKnown RBP3.99□□□□□ -1.77
GTF2E1-201ENST00000283875 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
GTF2E1-201ENST00000283875 SPINK1P00995 79 aa3.99□□□□□ -1.77
GTF2E1-201ENST00000283875 MYCBP2O75592 4640 aa3.98□□□□□ -1.77
GTF2E1-201ENST00000283875 SPACA4Q8TDM5 124 aa3.97□□□□□ -1.77
GTF2E1-201ENST00000283875 LRP1Q07954 4544 aaKnown RBP3.97□□□□□ -1.77
GTF2E1-201ENST00000283875 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
GTF2E1-201ENST00000283875 XP32Q5T750 250 aa3.95□□□□□ -1.78
GTF2E1-201ENST00000283875 Q8N1X5 172 aa3.95□□□□□ -1.78
GTF2E1-201ENST00000283875 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
GTF2E1-201ENST00000283875 KRTAP3-1Q9BYR8 98 aa3.92□□□□□ -1.78
GTF2E1-201ENST00000283875 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
GTF2E1-201ENST00000283875 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
GTF2E1-201ENST00000283875 FAT3Q8TDW7 4589 aa3.9□□□□□ -1.78
GTF2E1-201ENST00000283875 RYR1P21817 5038 aa3.89□□□□□ -1.79
GTF2E1-201ENST00000283875 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
GTF2E1-201ENST00000283875 HSPG2P98160 4391 aa3.86□□□□□ -1.79
GTF2E1-201ENST00000283875 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
GTF2E1-201ENST00000283875 KRTAP13-4Q3LI77 160 aa3.86□□□□□ -1.79
GTF2E1-201ENST00000283875 A0A1B0GVY2 172 aa3.84□□□□□ -1.79
GTF2E1-201ENST00000283875 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
GTF2E1-201ENST00000283875 KRTAP4-5Q9BYR2 181 aa3.81□□□□□ -1.8
GTF2E1-201ENST00000283875 S4R3F8 94 aa3.81□□□□□ -1.8
GTF2E1-201ENST00000283875 KRTAP13-2Q52LG2 175 aa3.8□□□□□ -1.8
GTF2E1-201ENST00000283875 Q5VSD8 79 aa3.79□□□□□ -1.8
GTF2E1-201ENST00000283875 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
GTF2E1-201ENST00000283875 HERC2O95714 4834 aa3.77□□□□□ -1.81
GTF2E1-201ENST00000283875 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
GTF2E1-201ENST00000283875 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
GTF2E1-201ENST00000283875 HERC1Q15751 4861 aa3.74□□□□□ -1.81
GTF2E1-201ENST00000283875 PCLOQ9Y6V0 5065 aa3.74□□□□□ -1.81
GTF2E1-201ENST00000283875 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
GTF2E1-201ENST00000283875 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
GTF2E1-201ENST00000283875 A0A0D9SG42 100 aa3.73□□□□□ -1.81
GTF2E1-201ENST00000283875 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
GTF2E1-201ENST00000283875 C9orf92A6NGG3 77 aa3.73□□□□□ -1.81
GTF2E1-201ENST00000283875 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
GTF2E1-201ENST00000283875 LPAP08519 4548 aa3.72□□□□□ -1.81
GTF2E1-201ENST00000283875 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
GTF2E1-201ENST00000283875 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
GTF2E1-201ENST00000283875 KRTAP9-2Q9BYQ4 174 aa3.7□□□□□ -1.82
GTF2E1-201ENST00000283875 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
GTF2E1-201ENST00000283875 LRP2P98164 4655 aa3.69□□□□□ -1.82
GTF2E1-201ENST00000283875 KRTAP9-6A0A140TA67 174 aa3.69□□□□□ -1.82
GTF2E1-201ENST00000283875 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
GTF2E1-201ENST00000283875 KRTAP4-8Q9BYQ9 185 aa3.67□□□□□ -1.82
GTF2E1-201ENST00000283875 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
GTF2E1-201ENST00000283875 KRTAP19-1Q8IUB9 90 aa3.66□□□□□ -1.82
GTF2E1-201ENST00000283875 MUC2Q02817 5179 aa3.66□□□□□ -1.82
GTF2E1-201ENST00000283875 TNXBP22105 4242 aa3.64□□□□□ -1.83
GTF2E1-201ENST00000283875 PRO2289Q9P1D8 64 aa3.63□□□□□ -1.83
GTF2E1-201ENST00000283875 RNF213Q63HN8 5207 aa3.62□□□□□ -1.83
GTF2E1-201ENST00000283875 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.84
GTF2E1-201ENST00000283875 M0QZ58 72 aa3.58□□□□□ -1.84
GTF2E1-201ENST00000283875 SPRR5A0A1B0GTR4 108 aa3.57□□□□□ -1.84
GTF2E1-201ENST00000283875 UBR4Q5T4S7 5183 aa3.57□□□□□ -1.84
GTF2E1-201ENST00000283875 MT1HL1P0DM35 61 aa3.57□□□□□ -1.84
GTF2E1-201ENST00000283875 LCE3BQ5TA77 95 aa3.56□□□□□ -1.84
GTF2E1-201ENST00000283875 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
GTF2E1-201ENST00000283875 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
GTF2E1-201ENST00000283875 KRTAP9-9Q9BYP9 154 aa3.52□□□□□ -1.85
GTF2E1-201ENST00000283875 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
GTF2E1-201ENST00000283875 FAT4Q6V0I7 4981 aa3.49□□□□□ -1.85
GTF2E1-201ENST00000283875 INE1O15225 51 aa3.48□□□□□ -1.85
GTF2E1-201ENST00000283875 KRTAP9-7A8MTY7 169 aa3.47□□□□□ -1.85
GTF2E1-201ENST00000283875 HMCN2Q8NDA2 5059 aa3.44□□□□□ -1.86
GTF2E1-201ENST00000283875 KRTAP19-4Q3LI73 84 aa3.4□□□□□ -1.86
GTF2E1-201ENST00000283875 R4GN34 69 aa3.38□□□□□ -1.87
GTF2E1-201ENST00000283875 KRTAP4-1Q9BYQ7 146 aa3.35□□□□□ -1.87
GTF2E1-201ENST00000283875 KRTAP4-8A0A0G2JLE6 195 aa3.33□□□□□ -1.88
GTF2E1-201ENST00000283875 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
GTF2E1-201ENST00000283875 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
GTF2E1-201ENST00000283875 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
GTF2E1-201ENST00000283875 KRTAP9-3Q9BYQ3 159 aa3.23□□□□□ -1.89
GTF2E1-201ENST00000283875 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
GTF2E1-201ENST00000283875 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
GTF2E1-201ENST00000283875 M0R2T5 61 aa3.17□□□□□ -1.9
GTF2E1-201ENST00000283875 TNP1P09430 55 aa3.15□□□□□ -1.9
GTF2E1-201ENST00000283875 USH2AO75445 5202 aa3.13□□□□□ -1.91
GTF2E1-201ENST00000283875 KRTAP4-9Q9BYQ8 210 aa3.13□□□□□ -1.91
GTF2E1-201ENST00000283875 LCE5AQ5TCM9 118 aa3.13□□□□□ -1.91
GTF2E1-201ENST00000283875 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
GTF2E1-201ENST00000283875 KRTAP4-11Q9BYQ6 195 aa3.09□□□□□ -1.91
GTF2E1-201ENST00000283875 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
GTF2E1-201ENST00000283875 MT1HP80294 61 aa3.03□□□□□ -1.92
GTF2E1-201ENST00000283875 KRTAP10-10P60014 251 aa3□□□□□ -1.93
GTF2E1-201ENST00000283875 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
GTF2E1-201ENST00000283875 MT1FP04733 61 aa2.94□□□□□ -1.94
GTF2E1-201ENST00000283875 KRTAP10-12P60413 245 aa2.94□□□□□ -1.94
GTF2E1-201ENST00000283875 LCE3AQ5TA76 89 aa2.93□□□□□ -1.94
GTF2E1-201ENST00000283875 MT2AP02795 61 aa2.91□□□□□ -1.94
GTF2E1-201ENST00000283875 KMT2DO14686 5537 aa2.9□□□□□ -1.94
GTF2E1-201ENST00000283875 KRTAP9-8Q9BYQ0 159 aa2.88□□□□□ -1.95
GTF2E1-201ENST00000283875 KRTAP10-5P60370 271 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms