RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 LPAP08519 4548 aa3.2□□□□□ -1.9
TNFSF4-201ENST00000281834 XP32Q5T750 250 aa3.19□□□□□ -1.9
TNFSF4-201ENST00000281834 KRTAP3-1Q9BYR8 98 aa3.19□□□□□ -1.9
TNFSF4-201ENST00000281834 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
TNFSF4-201ENST00000281834 MT1HL1P0DM35 61 aa3.18□□□□□ -1.9
TNFSF4-201ENST00000281834 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
TNFSF4-201ENST00000281834 ABCA13Q86UQ4 5058 aa3.18□□□□□ -1.9
TNFSF4-201ENST00000281834 UQCR11O14957 56 aa3.16□□□□□ -1.9
TNFSF4-201ENST00000281834 RPL37P61927 97 aaKnown RBP3.16□□□□□ -1.9
TNFSF4-201ENST00000281834 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
TNFSF4-201ENST00000281834 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.9
TNFSF4-201ENST00000281834 A6NN06 94 aa3.15□□□□□ -1.91
TNFSF4-201ENST00000281834 J3QL48 77 aa3.15□□□□□ -1.91
TNFSF4-201ENST00000281834 HERC2O95714 4834 aa3.14□□□□□ -1.91
TNFSF4-201ENST00000281834 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
TNFSF4-201ENST00000281834 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
TNFSF4-201ENST00000281834 A0A1B0GU33 70 aa3.09□□□□□ -1.91
TNFSF4-201ENST00000281834 A0A0D9SG42 100 aa3.09□□□□□ -1.91
TNFSF4-201ENST00000281834 S4R3F8 94 aa3.08□□□□□ -1.92
TNFSF4-201ENST00000281834 MUC2Q02817 5179 aa3.08□□□□□ -1.92
TNFSF4-201ENST00000281834 BIRC6Q9NR09 4857 aa3.08□□□□□ -1.92
TNFSF4-201ENST00000281834 H0YAA0 97 aa3.07□□□□□ -1.92
TNFSF4-201ENST00000281834 TPRXLQ17RH7 258 aa3.05□□□□□ -1.92
TNFSF4-201ENST00000281834 H1FX-AS1Q4G0G2 97 aa3.05□□□□□ -1.92
TNFSF4-201ENST00000281834 HERC1Q15751 4861 aa3.05□□□□□ -1.92
TNFSF4-201ENST00000281834 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
TNFSF4-201ENST00000281834 K7ERS5 55 aa3.03□□□□□ -1.92
TNFSF4-201ENST00000281834 P0C880 135 aa3.03□□□□□ -1.92
TNFSF4-201ENST00000281834 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
TNFSF4-201ENST00000281834 SEC61BP60468 96 aaKnown RBP2.99□□□□□ -1.93
TNFSF4-201ENST00000281834 KRTAP10-6P60371 365 aaPredicted RBP2.99□□□□□ -1.93
TNFSF4-201ENST00000281834 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
TNFSF4-201ENST00000281834 KRTAP4-1Q9BYQ7 146 aa2.97□□□□□ -1.93
TNFSF4-201ENST00000281834 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
TNFSF4-201ENST00000281834 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
TNFSF4-201ENST00000281834 FAT4Q6V0I7 4981 aa2.95□□□□□ -1.94
TNFSF4-201ENST00000281834 LCE2DQ5TA82 110 aaPredicted RBP2.95□□□□□ -1.94
TNFSF4-201ENST00000281834 ROMO1P60602 79 aa2.94□□□□□ -1.94
TNFSF4-201ENST00000281834 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
TNFSF4-201ENST00000281834 M0QZ58 72 aa2.92□□□□□ -1.94
TNFSF4-201ENST00000281834 C10orf95Q9H7T3 257 aa2.92□□□□□ -1.94
TNFSF4-201ENST00000281834 R4GN34 69 aa2.91□□□□□ -1.94
TNFSF4-201ENST00000281834 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
TNFSF4-201ENST00000281834 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
TNFSF4-201ENST00000281834 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
TNFSF4-201ENST00000281834 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
TNFSF4-201ENST00000281834 LORP23490 312 aaPredicted RBP2.88□□□□□ -1.95
TNFSF4-201ENST00000281834 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
TNFSF4-201ENST00000281834 A0A0A0MQY5 61 aa2.84□□□□□ -1.95
TNFSF4-201ENST00000281834 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
TNFSF4-201ENST00000281834 M0R2T5 61 aa2.84□□□□□ -1.95
TNFSF4-201ENST00000281834 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
TNFSF4-201ENST00000281834 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
TNFSF4-201ENST00000281834 FLGP20930 4061 aaPredicted RBP2.77□□□□□ -1.97
TNFSF4-201ENST00000281834 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
TNFSF4-201ENST00000281834 LCE2CQ5TA81 110 aa2.71□□□□□ -1.98
TNFSF4-201ENST00000281834 KRTAP10-10P60014 251 aa2.7□□□□□ -1.98
TNFSF4-201ENST00000281834 MT1HP80294 61 aa2.68□□□□□ -1.98
TNFSF4-201ENST00000281834 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
TNFSF4-201ENST00000281834 MT1FP04733 61 aa2.63□□□□□ -1.99
TNFSF4-201ENST00000281834 MT2AP02795 61 aa2.62□□□□□ -1.99
TNFSF4-201ENST00000281834 KRTAP19-1Q8IUB9 90 aa2.61□□□□□ -1.99
TNFSF4-201ENST00000281834 USH2AO75445 5202 aa2.6□□□□□ -1.99
TNFSF4-201ENST00000281834 TNP1P09430 55 aa2.59□□□□□ -2
TNFSF4-201ENST00000281834 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
TNFSF4-201ENST00000281834 KRTAP15-1Q3LI76 137 aa2.57□□□□□ -2
TNFSF4-201ENST00000281834 FSIP2Q5CZC0 6907 aa2.57□□□□□ -2
TNFSF4-201ENST00000281834 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
TNFSF4-201ENST00000281834 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
TNFSF4-201ENST00000281834 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
TNFSF4-201ENST00000281834 PP632Q6XCG6 107 aa2.5□□□□□ -2.01
TNFSF4-201ENST00000281834 KMT2DO14686 5537 aa2.48□□□□□ -2.01
TNFSF4-201ENST00000281834 MT1BP07438 61 aa2.48□□□□□ -2.01
TNFSF4-201ENST00000281834 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
TNFSF4-201ENST00000281834 KRTAP9-3Q9BYQ3 159 aa2.47□□□□□ -2.01
TNFSF4-201ENST00000281834 MT1XP80297 61 aa2.44□□□□□ -2.02
TNFSF4-201ENST00000281834 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
TNFSF4-201ENST00000281834 KRTAP10-5P60370 271 aa2.44□□□□□ -2.02
TNFSF4-201ENST00000281834 LCE2BO14633 110 aa2.43□□□□□ -2.02
TNFSF4-201ENST00000281834 LCE2AQ5TA79 106 aaPredicted RBP2.43□□□□□ -2.02
TNFSF4-201ENST00000281834 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
TNFSF4-201ENST00000281834 KRTAP10-12P60413 245 aa2.4□□□□□ -2.02
TNFSF4-201ENST00000281834 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
TNFSF4-201ENST00000281834 KRTAP12-3P60328 96 aa2.35□□□□□ -2.03
TNFSF4-201ENST00000281834 KRTAP4-8A0A0G2JLE6 195 aa2.34□□□□□ -2.03
TNFSF4-201ENST00000281834 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
TNFSF4-201ENST00000281834 KRTAP23-1A1A580 65 aa2.34□□□□□ -2.03
TNFSF4-201ENST00000281834 SSPOA2VEC9 5147 aa2.32□□□□□ -2.04
TNFSF4-201ENST00000281834 KRTAP8-1Q8IUC2 63 aa2.32□□□□□ -2.04
TNFSF4-201ENST00000281834 KRTAP19-5Q3LI72 72 aa2.3□□□□□ -2.04
TNFSF4-201ENST00000281834 KRTAP9-6A0A140TA67 174 aa2.25□□□□□ -2.05
TNFSF4-201ENST00000281834 SPRR5A0A1B0GTR4 108 aa2.23□□□□□ -2.05
TNFSF4-201ENST00000281834 MUC12Q9UKN1 5478 aa2.23□□□□□ -2.05
TNFSF4-201ENST00000281834 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
TNFSF4-201ENST00000281834 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
TNFSF4-201ENST00000281834 KRTAP4-7Q9BYR0 210 aa2.21□□□□□ -2.06
TNFSF4-201ENST00000281834 KRTAP9-2Q9BYQ4 174 aa2.21□□□□□ -2.06
TNFSF4-201ENST00000281834 FCGBPQ9Y6R7 5405 aaPredicted RBP2.21□□□□□ -2.06
TNFSF4-201ENST00000281834 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
TNFSF4-201ENST00000281834 LCE3CQ5T5A8 94 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms