RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 LCE5AQ5TCM9 118 aa3.22□□□□□ -1.89
CD44-204ENST00000279452 H1FX-AS1Q4G0G2 97 aa3.21□□□□□ -1.9
CD44-204ENST00000279452 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
CD44-204ENST00000279452 H0Y9P7 68 aa3.2□□□□□ -1.9
CD44-204ENST00000279452 UQCRQO14949 82 aa3.2□□□□□ -1.9
CD44-204ENST00000279452 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
CD44-204ENST00000279452 LOC101927531A0A1B0GV80 90 aa3.19□□□□□ -1.9
CD44-204ENST00000279452 ATOX1O00244 68 aa3.19□□□□□ -1.9
CD44-204ENST00000279452 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
CD44-204ENST00000279452 MP68P56378 58 aa3.17□□□□□ -1.9
CD44-204ENST00000279452 CYP4F30PQ9H0H9 118 aa3.17□□□□□ -1.9
CD44-204ENST00000279452 LINC00208Q96KT6 92 aa3.16□□□□□ -1.9
CD44-204ENST00000279452 ANAPC13Q9BS18 74 aa3.16□□□□□ -1.9
CD44-204ENST00000279452 S4R3F8 94 aa3.16□□□□□ -1.9
CD44-204ENST00000279452 MT2AP02795 61 aa3.15□□□□□ -1.91
CD44-204ENST00000279452 MT-ATP8P03928 68 aa3.15□□□□□ -1.91
CD44-204ENST00000279452 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
CD44-204ENST00000279452 KRTAP9-8Q9BYQ0 159 aa3.15□□□□□ -1.91
CD44-204ENST00000279452 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
CD44-204ENST00000279452 MT1FP04733 61 aa3.13□□□□□ -1.91
CD44-204ENST00000279452 PMAIP1Q13794 54 aa3.13□□□□□ -1.91
CD44-204ENST00000279452 FAM236AA0A1B0GUQ0 79 aa3.12□□□□□ -1.91
CD44-204ENST00000279452 FAM236BA0A1B0GV22 79 aa3.12□□□□□ -1.91
CD44-204ENST00000279452 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
CD44-204ENST00000279452 IMUPQ9GZP8 106 aa3.12□□□□□ -1.91
CD44-204ENST00000279452 FLGP20930 4061 aaPredicted RBP3.12□□□□□ -1.91
CD44-204ENST00000279452 LCA10Q71F78 164 aa3.11□□□□□ -1.91
CD44-204ENST00000279452 KLKP1Q107X0 134 aa3.1□□□□□ -1.91
CD44-204ENST00000279452 CSAG1Q6PB30 78 aa3.1□□□□□ -1.91
CD44-204ENST00000279452 H3BPC8 53 aa3.09□□□□□ -1.91
CD44-204ENST00000279452 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
CD44-204ENST00000279452 A8MUN3 132 aa3.07□□□□□ -1.92
CD44-204ENST00000279452 TRAV7A0A075B6U4 112 aa3.06□□□□□ -1.92
CD44-204ENST00000279452 NDUFC1O43677 76 aa3.06□□□□□ -1.92
CD44-204ENST00000279452 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
CD44-204ENST00000279452 SNURFQ9Y675 71 aa3.03□□□□□ -1.92
CD44-204ENST00000279452 C20orf197Q8N268 126 aa3.01□□□□□ -1.93
CD44-204ENST00000279452 SERP2Q8N6R1 65 aa3.01□□□□□ -1.93
CD44-204ENST00000279452 DMAC1Q96GE9 116 aa3.01□□□□□ -1.93
CD44-204ENST00000279452 TMEM258P61165 79 aa3□□□□□ -1.93
CD44-204ENST00000279452 CHKB-CPT1BH3BT56 60 aa2.98□□□□□ -1.93
CD44-204ENST00000279452 ACYP2P14621 99 aa2.98□□□□□ -1.93
CD44-204ENST00000279452 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
CD44-204ENST00000279452 ADM2Q7Z4H4 148 aa2.98□□□□□ -1.93
CD44-204ENST00000279452 CCDC179H3BU77 68 aa2.96□□□□□ -1.94
CD44-204ENST00000279452 H0YAA0 97 aa2.95□□□□□ -1.94
CD44-204ENST00000279452 SPTSSBQ8NFR3 76 aa2.95□□□□□ -1.94
CD44-204ENST00000279452 SMIM26A0A096LP01 95 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 PSPHP1O15172 72 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 COX7CP15954 63 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 Q5VV11 94 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 BRK1Q8WUW1 75 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 CRIPTQ9P021 101 aa2.94□□□□□ -1.94
CD44-204ENST00000279452 KTN1-AS1Q86SY8 53 aa2.93□□□□□ -1.94
CD44-204ENST00000279452 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
CD44-204ENST00000279452 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
CD44-204ENST00000279452 SERP1Q9Y6X1 66 aa2.91□□□□□ -1.94
CD44-204ENST00000279452 USH2AO75445 5202 aa2.9□□□□□ -1.94
CD44-204ENST00000279452 R4GN34 69 aa2.9□□□□□ -1.95
CD44-204ENST00000279452 M0QZ58 72 aa2.89□□□□□ -1.95
CD44-204ENST00000279452 P0C880 135 aa2.89□□□□□ -1.95
CD44-204ENST00000279452 KRTAP19-6Q3LI70 58 aa2.89□□□□□ -1.95
CD44-204ENST00000279452 MT1BP07438 61 aa2.88□□□□□ -1.95
CD44-204ENST00000279452 KRTAP19-8Q3LI54 63 aa2.88□□□□□ -1.95
CD44-204ENST00000279452 LINC01554Q52M75 96 aa2.88□□□□□ -1.95
CD44-204ENST00000279452 COA5Q86WW8 74 aa2.88□□□□□ -1.95
CD44-204ENST00000279452 A6NN06 94 aa2.87□□□□□ -1.95
CD44-204ENST00000279452 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
CD44-204ENST00000279452 H7BZZ5 65 aa2.86□□□□□ -1.95
CD44-204ENST00000279452 CYSTM1Q9H1C7 97 aa2.86□□□□□ -1.95
CD44-204ENST00000279452 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CD44-204ENST00000279452 PLAC4Q8WY50 150 aa2.84□□□□□ -1.95
CD44-204ENST00000279452 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
CD44-204ENST00000279452 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
CD44-204ENST00000279452 PRO2289Q9P1D8 64 aa2.79□□□□□ -1.96
CD44-204ENST00000279452 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
CD44-204ENST00000279452 MACF1Q9UPN3 7388 aaKnown RBP2.76□□□□□ -1.97
CD44-204ENST00000279452 A0A1B0GU69 56 aa2.75□□□□□ -1.97
CD44-204ENST00000279452 A0A0D9SG42 100 aa2.74□□□□□ -1.97
CD44-204ENST00000279452 A0A1B0GU33 70 aa2.73□□□□□ -1.97
CD44-204ENST00000279452 K7ERS5 55 aa2.73□□□□□ -1.97
CD44-204ENST00000279452 MT1XP80297 61 aa2.73□□□□□ -1.97
CD44-204ENST00000279452 KRTAP13-4Q3LI77 160 aa2.73□□□□□ -1.97
CD44-204ENST00000279452 SPATA8Q6RVD6 105 aa2.72□□□□□ -1.97
CD44-204ENST00000279452 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
CD44-204ENST00000279452 Q1T7F1 81 aa2.7□□□□□ -1.98
CD44-204ENST00000279452 PRR15LQ9BU68 103 aa2.7□□□□□ -1.98
CD44-204ENST00000279452 SYNE2Q8WXH0 6885 aaKnown RBP2.69□□□□□ -1.98
CD44-204ENST00000279452 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
CD44-204ENST00000279452 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
CD44-204ENST00000279452 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
CD44-204ENST00000279452 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
CD44-204ENST00000279452 A6NED7 52 aa2.64□□□□□ -1.99
CD44-204ENST00000279452 A8MU10 97 aa2.64□□□□□ -1.99
CD44-204ENST00000279452 LUZP6Q538Z0 58 aa2.64□□□□□ -1.99
CD44-204ENST00000279452 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
CD44-204ENST00000279452 LINC01558Q9Y6Z2 57 aa2.64□□□□□ -1.99
CD44-204ENST00000279452 KRTAP12-2P59991 146 aa2.62□□□□□ -1.99
CD44-204ENST00000279452 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
CD44-204ENST00000279452 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms