RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 PRR26Q8N8Z3 221 aa4.98□□□□□ -1.61
TRIM43-201ENST00000272395 SPAG11AQ6PDA7 123 aa4.96□□□□□ -1.62
TRIM43-201ENST00000272395 A6NED7 52 aa4.95□□□□□ -1.62
TRIM43-201ENST00000272395 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
TRIM43-201ENST00000272395 HERC1Q15751 4861 aa4.94□□□□□ -1.62
TRIM43-201ENST00000272395 KRTAP16-1A8MUX0 517 aa4.94□□□□□ -1.62
TRIM43-201ENST00000272395 IGKV2-30P06310 120 aa4.94□□□□□ -1.62
TRIM43-201ENST00000272395 KRTAP10-8P60410 259 aa4.94□□□□□ -1.62
TRIM43-201ENST00000272395 ATP11AUNQ6ZP68 121 aa4.93□□□□□ -1.62
TRIM43-201ENST00000272395 CDC42SE1Q9NRR8 79 aa4.93□□□□□ -1.62
TRIM43-201ENST00000272395 TNXBP22105 4242 aa4.93□□□□□ -1.62
TRIM43-201ENST00000272395 SPINK1P00995 79 aa4.92□□□□□ -1.62
TRIM43-201ENST00000272395 PMAIP1Q13794 54 aa4.92□□□□□ -1.62
TRIM43-201ENST00000272395 DMBT1Q9UGM3 2413 aaPredicted RBP4.91□□□□□ -1.62
TRIM43-201ENST00000272395 LCA10Q71F78 164 aa4.91□□□□□ -1.62
TRIM43-201ENST00000272395 RPS29P62273 56 aaKnown RBP4.9□□□□□ -1.62
TRIM43-201ENST00000272395 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
TRIM43-201ENST00000272395 A8MU10 97 aa4.88□□□□□ -1.63
TRIM43-201ENST00000272395 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
TRIM43-201ENST00000272395 RETNLBQ9BQ08 111 aa4.85□□□□□ -1.63
TRIM43-201ENST00000272395 SPINK7P58062 85 aa4.84□□□□□ -1.63
TRIM43-201ENST00000272395 LINC00304Q8N9R0 145 aa4.84□□□□□ -1.63
TRIM43-201ENST00000272395 IGKV2D-30A0A075B6S6 120 aa4.83□□□□□ -1.64
TRIM43-201ENST00000272395 A6NN06 94 aa4.83□□□□□ -1.64
TRIM43-201ENST00000272395 HMCN2Q8NDA2 5059 aa4.82□□□□□ -1.64
TRIM43-201ENST00000272395 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
TRIM43-201ENST00000272395 A0A1B0GU69 56 aa4.81□□□□□ -1.64
TRIM43-201ENST00000272395 C7orf65Q6ZTY9 151 aa4.81□□□□□ -1.64
TRIM43-201ENST00000272395 SEC61GP60059 68 aa4.77□□□□□ -1.65
TRIM43-201ENST00000272395 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
TRIM43-201ENST00000272395 A8MUU9 505 aa4.75□□□□□ -1.65
TRIM43-201ENST00000272395 UQCR11O14957 56 aa4.75□□□□□ -1.65
TRIM43-201ENST00000272395 C20orf166-AS1Q96NR2 134 aa4.75□□□□□ -1.65
TRIM43-201ENST00000272395 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
TRIM43-201ENST00000272395 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
TRIM43-201ENST00000272395 SEC61BP60468 96 aaKnown RBP4.69□□□□□ -1.66
TRIM43-201ENST00000272395 LRP2P98164 4655 aa4.68□□□□□ -1.66
TRIM43-201ENST00000272395 LPAP08519 4548 aa4.68□□□□□ -1.66
TRIM43-201ENST00000272395 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
TRIM43-201ENST00000272395 UBR4Q5T4S7 5183 aa4.66□□□□□ -1.66
TRIM43-201ENST00000272395 RBM12B-AS1Q9P1G2 102 aa4.65□□□□□ -1.66
TRIM43-201ENST00000272395 TPRXLQ17RH7 258 aa4.62□□□□□ -1.67
TRIM43-201ENST00000272395 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
TRIM43-201ENST00000272395 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
TRIM43-201ENST00000272395 RNF213Q63HN8 5207 aa4.57□□□□□ -1.68
TRIM43-201ENST00000272395 A0A1B0GU33 70 aa4.55□□□□□ -1.68
TRIM43-201ENST00000272395 H0YAA0 97 aa4.54□□□□□ -1.68
TRIM43-201ENST00000272395 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
TRIM43-201ENST00000272395 RPL37P61927 97 aaKnown RBP4.52□□□□□ -1.69
TRIM43-201ENST00000272395 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
TRIM43-201ENST00000272395 ADM2Q7Z4H4 148 aa4.5□□□□□ -1.69
TRIM43-201ENST00000272395 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.49□□□□□ -1.69
TRIM43-201ENST00000272395 MUC17Q685J3 4493 aa4.48□□□□□ -1.69
TRIM43-201ENST00000272395 MUC2Q02817 5179 aa4.47□□□□□ -1.69
TRIM43-201ENST00000272395 K7ERS5 55 aa4.46□□□□□ -1.7
TRIM43-201ENST00000272395 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
TRIM43-201ENST00000272395 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
TRIM43-201ENST00000272395 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
TRIM43-201ENST00000272395 S4R3F8 94 aa4.42□□□□□ -1.7
TRIM43-201ENST00000272395 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
TRIM43-201ENST00000272395 KRTAP25-1Q3LHN0 102 aa4.35□□□□□ -1.71
TRIM43-201ENST00000272395 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
TRIM43-201ENST00000272395 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
TRIM43-201ENST00000272395 ROMO1P60602 79 aa4.32□□□□□ -1.72
TRIM43-201ENST00000272395 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
TRIM43-201ENST00000272395 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
TRIM43-201ENST00000272395 P0C880 135 aa4.29□□□□□ -1.72
TRIM43-201ENST00000272395 A0A0D9SG42 100 aa4.26□□□□□ -1.73
TRIM43-201ENST00000272395 M0QZ58 72 aa4.26□□□□□ -1.73
TRIM43-201ENST00000272395 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
TRIM43-201ENST00000272395 MT1HP80294 61 aa4.22□□□□□ -1.73
TRIM43-201ENST00000272395 KRTAP5-9P26371 169 aa4.19□□□□□ -1.74
TRIM43-201ENST00000272395 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
TRIM43-201ENST00000272395 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
TRIM43-201ENST00000272395 CRIPTQ9P021 101 aa4.17□□□□□ -1.74
TRIM43-201ENST00000272395 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
TRIM43-201ENST00000272395 M0R2T5 61 aa4.15□□□□□ -1.75
TRIM43-201ENST00000272395 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
TRIM43-201ENST00000272395 R4GN34 69 aa4.09□□□□□ -1.76
TRIM43-201ENST00000272395 C10orf95Q9H7T3 257 aa4.05□□□□□ -1.76
TRIM43-201ENST00000272395 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
TRIM43-201ENST00000272395 KRTAP19-4Q3LI73 84 aa4.01□□□□□ -1.77
TRIM43-201ENST00000272395 MT2AP02795 61 aa3.99□□□□□ -1.77
TRIM43-201ENST00000272395 MT1FP04733 61 aa3.97□□□□□ -1.77
TRIM43-201ENST00000272395 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
TRIM43-201ENST00000272395 KRTAP9-3Q9BYQ3 159 aa3.96□□□□□ -1.78
TRIM43-201ENST00000272395 KRTAP10-10P60014 251 aa3.94□□□□□ -1.78
TRIM43-201ENST00000272395 PP632Q6XCG6 107 aa3.9□□□□□ -1.79
TRIM43-201ENST00000272395 CAMK2N1Q7Z7J9 78 aa3.88□□□□□ -1.79
TRIM43-201ENST00000272395 KRTAP5-4Q6L8H1 288 aa3.86□□□□□ -1.79
TRIM43-201ENST00000272395 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.79
TRIM43-201ENST00000272395 USH2AO75445 5202 aa3.83□□□□□ -1.8
TRIM43-201ENST00000272395 NDUFAF8A1L188 74 aa3.81□□□□□ -1.8
TRIM43-201ENST00000272395 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
TRIM43-201ENST00000272395 CRCT1Q9UGL9 99 aa3.78□□□□□ -1.81
TRIM43-201ENST00000272395 TNP1P09430 55 aa3.77□□□□□ -1.81
TRIM43-201ENST00000272395 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
TRIM43-201ENST00000272395 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
TRIM43-201ENST00000272395 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
TRIM43-201ENST00000272395 MT1BP07438 61 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms