RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 FAT4Q6V0I7 4981 aa7.9□□□□□ -1.15
COPS3-201ENST00000268717 MPLKIPQ8TAP9 179 aa7.87□□□□□ -1.15
COPS3-201ENST00000268717 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
COPS3-201ENST00000268717 SPTSSBQ8NFR3 76 aa7.81□□□□□ -1.16
COPS3-201ENST00000268717 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
COPS3-201ENST00000268717 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
COPS3-201ENST00000268717 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
COPS3-201ENST00000268717 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
COPS3-201ENST00000268717 PRR15LQ9BU68 103 aa7.7□□□□□ -1.18
COPS3-201ENST00000268717 PSPHP1O15172 72 aa7.7□□□□□ -1.18
COPS3-201ENST00000268717 Q5VV11 94 aa7.69□□□□□ -1.18
COPS3-201ENST00000268717 S4R3F8 94 aa7.67□□□□□ -1.18
COPS3-201ENST00000268717 LCA10Q71F78 164 aa7.64□□□□□ -1.19
COPS3-201ENST00000268717 A0A1B0GU69 56 aa7.63□□□□□ -1.19
COPS3-201ENST00000268717 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
COPS3-201ENST00000268717 LCE2CQ5TA81 110 aa7.6□□□□□ -1.19
COPS3-201ENST00000268717 SEC61GP60059 68 aa7.59□□□□□ -1.19
COPS3-201ENST00000268717 A6NED7 52 aa7.5□□□□□ -1.21
COPS3-201ENST00000268717 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
COPS3-201ENST00000268717 MT1HP80294 61 aa7.49□□□□□ -1.21
COPS3-201ENST00000268717 FLGP20930 4061 aaPredicted RBP7.49□□□□□ -1.21
COPS3-201ENST00000268717 BRK1Q8WUW1 75 aa7.47□□□□□ -1.21
COPS3-201ENST00000268717 KRTAP9-2Q9BYQ4 174 aa7.47□□□□□ -1.21
COPS3-201ENST00000268717 UQCR11O14957 56 aa7.45□□□□□ -1.22
COPS3-201ENST00000268717 CDC42SE1Q9NRR8 79 aa7.43□□□□□ -1.22
COPS3-201ENST00000268717 H0YAA0 97 aa7.42□□□□□ -1.22
COPS3-201ENST00000268717 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
COPS3-201ENST00000268717 A0A1B0GU33 70 aa7.38□□□□□ -1.23
COPS3-201ENST00000268717 KRTAP10-6P60371 365 aaPredicted RBP7.38□□□□□ -1.23
COPS3-201ENST00000268717 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
COPS3-201ENST00000268717 M0R2T5 61 aa7.35□□□□□ -1.23
COPS3-201ENST00000268717 MIR22HGQ0VDD5 57 aa7.34□□□□□ -1.23
COPS3-201ENST00000268717 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.24
COPS3-201ENST00000268717 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
COPS3-201ENST00000268717 A8MU10 97 aa7.28□□□□□ -1.24
COPS3-201ENST00000268717 P0C880 135 aa7.28□□□□□ -1.24
COPS3-201ENST00000268717 M0QZ58 72 aa7.19□□□□□ -1.26
COPS3-201ENST00000268717 KRTAP9-6A0A140TA67 174 aa7.18□□□□□ -1.26
COPS3-201ENST00000268717 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
COPS3-201ENST00000268717 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
COPS3-201ENST00000268717 KRTAP9-8Q9BYQ0 159 aa7.11□□□□□ -1.27
COPS3-201ENST00000268717 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
COPS3-201ENST00000268717 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
COPS3-201ENST00000268717 R4GN34 69 aa7.08□□□□□ -1.28
COPS3-201ENST00000268717 CRIPTQ9P021 101 aa7.06□□□□□ -1.28
COPS3-201ENST00000268717 A6NN06 94 aa7.05□□□□□ -1.28
COPS3-201ENST00000268717 K7ERS5 55 aa7.04□□□□□ -1.28
COPS3-201ENST00000268717 MT2AP02795 61 aa7.01□□□□□ -1.29
COPS3-201ENST00000268717 A0A0D9SG42 100 aa7.01□□□□□ -1.29
COPS3-201ENST00000268717 SVIPQ8NHG7 77 aa7□□□□□ -1.29
COPS3-201ENST00000268717 LCE2BO14633 110 aa6.99□□□□□ -1.29
COPS3-201ENST00000268717 MT1FP04733 61 aa6.96□□□□□ -1.3
COPS3-201ENST00000268717 USH2AO75445 5202 aa6.95□□□□□ -1.3
COPS3-201ENST00000268717 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
COPS3-201ENST00000268717 KRTAP10-10P60014 251 aa6.91□□□□□ -1.3
COPS3-201ENST00000268717 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
COPS3-201ENST00000268717 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
COPS3-201ENST00000268717 LINC01554Q52M75 96 aa6.88□□□□□ -1.31
COPS3-201ENST00000268717 SSPOA2VEC9 5147 aa6.86□□□□□ -1.31
COPS3-201ENST00000268717 SPRR2GQ9BYE4 73 aa6.86□□□□□ -1.31
COPS3-201ENST00000268717 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
COPS3-201ENST00000268717 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
COPS3-201ENST00000268717 KRTAP19-1Q8IUB9 90 aa6.79□□□□□ -1.32
COPS3-201ENST00000268717 ROMO1P60602 79 aa6.74□□□□□ -1.33
COPS3-201ENST00000268717 FCGBPQ9Y6R7 5405 aaPredicted RBP6.68□□□□□ -1.34
COPS3-201ENST00000268717 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
COPS3-201ENST00000268717 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
COPS3-201ENST00000268717 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
COPS3-201ENST00000268717 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
COPS3-201ENST00000268717 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
COPS3-201ENST00000268717 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
COPS3-201ENST00000268717 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
COPS3-201ENST00000268717 MT1BP07438 61 aa6.52□□□□□ -1.37
COPS3-201ENST00000268717 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
COPS3-201ENST00000268717 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
COPS3-201ENST00000268717 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
COPS3-201ENST00000268717 TNP1P09430 55 aa6.36□□□□□ -1.39
COPS3-201ENST00000268717 SYNE2Q8WXH0 6885 aaKnown RBP6.35□□□□□ -1.39
COPS3-201ENST00000268717 MT1XP80297 61 aa6.33□□□□□ -1.4
COPS3-201ENST00000268717 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
COPS3-201ENST00000268717 PRO2289Q9P1D8 64 aa6.3□□□□□ -1.4
COPS3-201ENST00000268717 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
COPS3-201ENST00000268717 PP632Q6XCG6 107 aa6.28□□□□□ -1.4
COPS3-201ENST00000268717 KRTAP6-3Q3LI67 103 aa6.18□□□□□ -1.42
COPS3-201ENST00000268717 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
COPS3-201ENST00000268717 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
COPS3-201ENST00000268717 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
COPS3-201ENST00000268717 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
COPS3-201ENST00000268717 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
COPS3-201ENST00000268717 LCE3AQ5TA76 89 aa6.03□□□□□ -1.44
COPS3-201ENST00000268717 KMT2DO14686 5537 aa5.99□□□□□ -1.45
COPS3-201ENST00000268717 KRTAP8-1Q8IUC2 63 aa5.97□□□□□ -1.45
COPS3-201ENST00000268717 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
COPS3-201ENST00000268717 NEBP20929 6669 aa5.94□□□□□ -1.46
COPS3-201ENST00000268717 MDN1Q9NU22 5596 aa5.89□□□□□ -1.47
COPS3-201ENST00000268717 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
COPS3-201ENST00000268717 KRTAP4-8Q9BYQ9 185 aa5.82□□□□□ -1.48
COPS3-201ENST00000268717 H3BS24 57 aa5.81□□□□□ -1.48
COPS3-201ENST00000268717 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
COPS3-201ENST00000268717 SPRR2FQ96RM1 72 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 191.6 ms