RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
SCAF11-201ENST00000266589 RBM12B-AS1Q9P1G2 102 aa5.93□□□□□ -1.46
SCAF11-201ENST00000266589 PSPHP1O15172 72 aa5.89□□□□□ -1.47
SCAF11-201ENST00000266589 H3BS24 57 aa5.89□□□□□ -1.47
SCAF11-201ENST00000266589 KTN1-AS1Q86SY8 53 aa5.89□□□□□ -1.47
SCAF11-201ENST00000266589 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
SCAF11-201ENST00000266589 HERC1Q15751 4861 aa5.87□□□□□ -1.47
SCAF11-201ENST00000266589 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
SCAF11-201ENST00000266589 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
SCAF11-201ENST00000266589 HMCN2Q8NDA2 5059 aa5.83□□□□□ -1.48
SCAF11-201ENST00000266589 Q5VV11 94 aa5.83□□□□□ -1.48
SCAF11-201ENST00000266589 KRTAP4-1Q9BYQ7 146 aa5.82□□□□□ -1.48
SCAF11-201ENST00000266589 MUC17Q685J3 4493 aa5.8□□□□□ -1.48
SCAF11-201ENST00000266589 H1FX-AS1Q4G0G2 97 aa5.8□□□□□ -1.48
SCAF11-201ENST00000266589 S4R3F8 94 aa5.79□□□□□ -1.48
SCAF11-201ENST00000266589 LCA10Q71F78 164 aa5.79□□□□□ -1.48
SCAF11-201ENST00000266589 A0A1B0GU69 56 aa5.78□□□□□ -1.48
SCAF11-201ENST00000266589 A6NED7 52 aa5.7□□□□□ -1.5
SCAF11-201ENST00000266589 A6NN06 94 aa5.67□□□□□ -1.5
SCAF11-201ENST00000266589 KRTAP19-2Q3LHN2 52 aa5.66□□□□□ -1.5
SCAF11-201ENST00000266589 MUC2Q02817 5179 aa5.66□□□□□ -1.5
SCAF11-201ENST00000266589 CSAG1Q6PB30 78 aa5.63□□□□□ -1.51
SCAF11-201ENST00000266589 A8MU10 97 aa5.62□□□□□ -1.51
SCAF11-201ENST00000266589 UQCR11O14957 56 aa5.61□□□□□ -1.51
SCAF11-201ENST00000266589 CDC42SE1Q9NRR8 79 aa5.6□□□□□ -1.51
SCAF11-201ENST00000266589 UBR4Q5T4S7 5183 aa5.59□□□□□ -1.52
SCAF11-201ENST00000266589 A0A1B0GU33 70 aa5.58□□□□□ -1.52
SCAF11-201ENST00000266589 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
SCAF11-201ENST00000266589 MIR22HGQ0VDD5 57 aa5.56□□□□□ -1.52
SCAF11-201ENST00000266589 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
SCAF11-201ENST00000266589 RNF213Q63HN8 5207 aa5.55□□□□□ -1.52
SCAF11-201ENST00000266589 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
SCAF11-201ENST00000266589 P0C880 135 aa5.54□□□□□ -1.52
SCAF11-201ENST00000266589 LINC01554Q52M75 96 aa5.54□□□□□ -1.52
SCAF11-201ENST00000266589 H0YAA0 97 aa5.51□□□□□ -1.53
SCAF11-201ENST00000266589 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
SCAF11-201ENST00000266589 LCE2BO14633 110 aa5.49□□□□□ -1.53
SCAF11-201ENST00000266589 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
SCAF11-201ENST00000266589 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
SCAF11-201ENST00000266589 FAT4Q6V0I7 4981 aa5.4□□□□□ -1.55
SCAF11-201ENST00000266589 MT1HP80294 61 aa5.39□□□□□ -1.55
SCAF11-201ENST00000266589 A0A0D9SG42 100 aa5.37□□□□□ -1.55
SCAF11-201ENST00000266589 M0QZ58 72 aa5.37□□□□□ -1.55
SCAF11-201ENST00000266589 M0R2T5 61 aa5.37□□□□□ -1.55
SCAF11-201ENST00000266589 PRAC1Q96KF2 57 aa5.36□□□□□ -1.55
SCAF11-201ENST00000266589 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
SCAF11-201ENST00000266589 R4GN34 69 aa5.35□□□□□ -1.55
SCAF11-201ENST00000266589 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
SCAF11-201ENST00000266589 K7ERS5 55 aa5.29□□□□□ -1.56
SCAF11-201ENST00000266589 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
SCAF11-201ENST00000266589 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
SCAF11-201ENST00000266589 KRTAP12-2P59991 146 aa5.24□□□□□ -1.57
SCAF11-201ENST00000266589 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
SCAF11-201ENST00000266589 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
SCAF11-201ENST00000266589 MT2AP02795 61 aa5.2□□□□□ -1.58
SCAF11-201ENST00000266589 KRTAP9-8Q9BYQ0 159 aa5.2□□□□□ -1.58
SCAF11-201ENST00000266589 MT1FP04733 61 aa5.18□□□□□ -1.58
SCAF11-201ENST00000266589 KRTAP10-10P60014 251 aa5.17□□□□□ -1.58
SCAF11-201ENST00000266589 ROMO1P60602 79 aa5.16□□□□□ -1.58
SCAF11-201ENST00000266589 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
SCAF11-201ENST00000266589 KRTAP19-1Q8IUB9 90 aa5.11□□□□□ -1.59
SCAF11-201ENST00000266589 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
SCAF11-201ENST00000266589 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
SCAF11-201ENST00000266589 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SCAF11-201ENST00000266589 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
SCAF11-201ENST00000266589 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
SCAF11-201ENST00000266589 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
SCAF11-201ENST00000266589 C10orf95Q9H7T3 257 aa4.95□□□□□ -1.62
SCAF11-201ENST00000266589 KRTAP9-6A0A140TA67 174 aa4.92□□□□□ -1.62
SCAF11-201ENST00000266589 MT1BP07438 61 aa4.92□□□□□ -1.62
SCAF11-201ENST00000266589 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
SCAF11-201ENST00000266589 TNP1P09430 55 aa4.78□□□□□ -1.64
SCAF11-201ENST00000266589 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
SCAF11-201ENST00000266589 MT1XP80297 61 aa4.77□□□□□ -1.65
SCAF11-201ENST00000266589 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
SCAF11-201ENST00000266589 USH2AO75445 5202 aa4.73□□□□□ -1.65
SCAF11-201ENST00000266589 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
SCAF11-201ENST00000266589 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.65
SCAF11-201ENST00000266589 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.65
SCAF11-201ENST00000266589 KRTAP4-6Q9BYQ5 205 aa4.71□□□□□ -1.65
SCAF11-201ENST00000266589 PRO2289Q9P1D8 64 aa4.7□□□□□ -1.66
SCAF11-201ENST00000266589 PP632Q6XCG6 107 aa4.67□□□□□ -1.66
SCAF11-201ENST00000266589 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
SCAF11-201ENST00000266589 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
SCAF11-201ENST00000266589 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
SCAF11-201ENST00000266589 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
SCAF11-201ENST00000266589 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
SCAF11-201ENST00000266589 SSPOA2VEC9 5147 aa4.56□□□□□ -1.68
SCAF11-201ENST00000266589 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
SCAF11-201ENST00000266589 KRTAP8-1Q8IUC2 63 aa4.46□□□□□ -1.7
SCAF11-201ENST00000266589 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.41□□□□□ -1.7
SCAF11-201ENST00000266589 KRTAP4-8A0A0G2JLE6 195 aa4.4□□□□□ -1.71
SCAF11-201ENST00000266589 KRTAP4-8Q9BYQ9 185 aa4.4□□□□□ -1.71
SCAF11-201ENST00000266589 KRTAP9-7A8MTY7 169 aa4.39□□□□□ -1.71
SCAF11-201ENST00000266589 KRTAP12-3P60328 96 aa4.38□□□□□ -1.71
SCAF11-201ENST00000266589 KMT2DO14686 5537 aa4.38□□□□□ -1.71
SCAF11-201ENST00000266589 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
SCAF11-201ENST00000266589 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
SCAF11-201ENST00000266589 KRTAP19-7Q3SYF9 63 aa4.26□□□□□ -1.73
SCAF11-201ENST00000266589 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms