RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
SSR3-201ENST00000265044 K7ERS5 55 aa4.77□□□□□ -1.65
SSR3-201ENST00000265044 A0A1B0GU33 70 aa4.76□□□□□ -1.65
SSR3-201ENST00000265044 LCA10Q71F78 164 aa4.75□□□□□ -1.65
SSR3-201ENST00000265044 KRTAP3-1Q9BYR8 98 aa4.75□□□□□ -1.65
SSR3-201ENST00000265044 BIRC6Q9NR09 4857 aa4.74□□□□□ -1.65
SSR3-201ENST00000265044 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
SSR3-201ENST00000265044 M0R2T5 61 aa4.73□□□□□ -1.65
SSR3-201ENST00000265044 A0A0D9SG42 100 aa4.72□□□□□ -1.65
SSR3-201ENST00000265044 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
SSR3-201ENST00000265044 LINC01554Q52M75 96 aa4.7□□□□□ -1.66
SSR3-201ENST00000265044 SVIPQ8NHG7 77 aa4.7□□□□□ -1.66
SSR3-201ENST00000265044 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
SSR3-201ENST00000265044 TNXBP22105 4242 aa4.69□□□□□ -1.66
SSR3-201ENST00000265044 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
SSR3-201ENST00000265044 A8MU10 97 aa4.68□□□□□ -1.66
SSR3-201ENST00000265044 LRP2P98164 4655 aa4.67□□□□□ -1.66
SSR3-201ENST00000265044 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
SSR3-201ENST00000265044 PCLOQ9Y6V0 5065 aa4.64□□□□□ -1.67
SSR3-201ENST00000265044 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
SSR3-201ENST00000265044 R4GN34 69 aa4.62□□□□□ -1.67
SSR3-201ENST00000265044 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
SSR3-201ENST00000265044 LPAP08519 4548 aa4.61□□□□□ -1.67
SSR3-201ENST00000265044 M0QZ58 72 aa4.59□□□□□ -1.68
SSR3-201ENST00000265044 P0C880 135 aa4.57□□□□□ -1.68
SSR3-201ENST00000265044 KRTAP4-1Q9BYQ7 146 aa4.55□□□□□ -1.68
SSR3-201ENST00000265044 KRTAP3-3Q9BYR6 98 aa4.54□□□□□ -1.68
SSR3-201ENST00000265044 H0YAA0 97 aa4.51□□□□□ -1.69
SSR3-201ENST00000265044 HERC1Q15751 4861 aa4.51□□□□□ -1.69
SSR3-201ENST00000265044 KRTAP10-6P60371 365 aaPredicted RBP4.46□□□□□ -1.7
SSR3-201ENST00000265044 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
SSR3-201ENST00000265044 KTN1-AS1Q86SY8 53 aa4.45□□□□□ -1.7
SSR3-201ENST00000265044 KRTAP3-2Q9BYR7 98 aa4.43□□□□□ -1.7
SSR3-201ENST00000265044 A6NN06 94 aa4.41□□□□□ -1.7
SSR3-201ENST00000265044 PRAC1Q96KF2 57 aa4.4□□□□□ -1.7
SSR3-201ENST00000265044 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
SSR3-201ENST00000265044 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
SSR3-201ENST00000265044 MUC2Q02817 5179 aa4.39□□□□□ -1.71
SSR3-201ENST00000265044 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
SSR3-201ENST00000265044 ROMO1P60602 79 aa4.34□□□□□ -1.71
SSR3-201ENST00000265044 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
SSR3-201ENST00000265044 RNF213Q63HN8 5207 aa4.32□□□□□ -1.72
SSR3-201ENST00000265044 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
SSR3-201ENST00000265044 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
SSR3-201ENST00000265044 LORP23490 312 aaPredicted RBP4.29□□□□□ -1.72
SSR3-201ENST00000265044 UBR4Q5T4S7 5183 aa4.29□□□□□ -1.72
SSR3-201ENST00000265044 KRTAP12-1P59990 96 aa4.27□□□□□ -1.73
SSR3-201ENST00000265044 MT1HP80294 61 aa4.24□□□□□ -1.73
SSR3-201ENST00000265044 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
SSR3-201ENST00000265044 KRTAP19-2Q3LHN2 52 aa4.21□□□□□ -1.74
SSR3-201ENST00000265044 MUC17Q685J3 4493 aa4.19□□□□□ -1.74
SSR3-201ENST00000265044 LCE2CQ5TA81 110 aa4.19□□□□□ -1.74
SSR3-201ENST00000265044 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
SSR3-201ENST00000265044 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
SSR3-201ENST00000265044 FLGP20930 4061 aaPredicted RBP4.15□□□□□ -1.74
SSR3-201ENST00000265044 TNP1P09430 55 aa4.11□□□□□ -1.75
SSR3-201ENST00000265044 MT2AP02795 61 aa4.11□□□□□ -1.75
SSR3-201ENST00000265044 MT1FP04733 61 aa4.09□□□□□ -1.75
SSR3-201ENST00000265044 KRTAP9-8Q9BYQ0 159 aa4.02□□□□□ -1.77
SSR3-201ENST00000265044 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
SSR3-201ENST00000265044 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
SSR3-201ENST00000265044 KRTAP19-1Q8IUB9 90 aa3.99□□□□□ -1.77
SSR3-201ENST00000265044 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
SSR3-201ENST00000265044 LCE2BO14633 110 aa3.88□□□□□ -1.79
SSR3-201ENST00000265044 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
SSR3-201ENST00000265044 LCE2AQ5TA79 106 aaPredicted RBP3.86□□□□□ -1.79
SSR3-201ENST00000265044 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SSR3-201ENST00000265044 KRTAP19-8Q3LI54 63 aa3.85□□□□□ -1.79
SSR3-201ENST00000265044 MT1BP07438 61 aa3.83□□□□□ -1.8
SSR3-201ENST00000265044 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
SSR3-201ENST00000265044 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
SSR3-201ENST00000265044 LCE3AQ5TA76 89 aa3.76□□□□□ -1.81
SSR3-201ENST00000265044 MT1XP80297 61 aa3.74□□□□□ -1.81
SSR3-201ENST00000265044 USH2AO75445 5202 aa3.73□□□□□ -1.81
SSR3-201ENST00000265044 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SSR3-201ENST00000265044 KRTAP23-1A1A580 65 aa3.67□□□□□ -1.82
SSR3-201ENST00000265044 KRTAP10-7P60409 375 aaPredicted RBP3.67□□□□□ -1.82
SSR3-201ENST00000265044 NDUFAF8A1L188 74 aa3.65□□□□□ -1.82
SSR3-201ENST00000265044 KRTAP12-3P60328 96 aa3.65□□□□□ -1.82
SSR3-201ENST00000265044 KRTAP15-1Q3LI76 137 aa3.59□□□□□ -1.83
SSR3-201ENST00000265044 KRTAP4-8A0A0G2JLE6 195 aa3.57□□□□□ -1.84
SSR3-201ENST00000265044 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
SSR3-201ENST00000265044 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
SSR3-201ENST00000265044 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
SSR3-201ENST00000265044 KMT2DO14686 5537 aa3.49□□□□□ -1.85
SSR3-201ENST00000265044 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
SSR3-201ENST00000265044 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
SSR3-201ENST00000265044 SSPOA2VEC9 5147 aa3.46□□□□□ -1.85
SSR3-201ENST00000265044 H3BS24 57 aa3.43□□□□□ -1.86
SSR3-201ENST00000265044 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
SSR3-201ENST00000265044 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
SSR3-201ENST00000265044 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
SSR3-201ENST00000265044 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
SSR3-201ENST00000265044 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
SSR3-201ENST00000265044 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
SSR3-201ENST00000265044 KRTAP4-6Q9BYQ5 205 aa3.32□□□□□ -1.88
SSR3-201ENST00000265044 KRTAP19-7Q3SYF9 63 aa3.3□□□□□ -1.88
SSR3-201ENST00000265044 MT1EP04732 61 aa3.29□□□□□ -1.88
SSR3-201ENST00000265044 KRTAP4-7Q9BYR0 210 aa3.27□□□□□ -1.89
SSR3-201ENST00000265044 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms