RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
GCM1-201ENST00000259803 SMR3BP02814 79 aaPredicted RBP5.89□□□□□ -1.47
GCM1-201ENST00000259803 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
GCM1-201ENST00000259803 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
GCM1-201ENST00000259803 KRTAP17-1Q9BYP8 105 aa5.89□□□□□ -1.47
GCM1-201ENST00000259803 ABCA13Q86UQ4 5058 aa5.86□□□□□ -1.47
GCM1-201ENST00000259803 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
GCM1-201ENST00000259803 R4GN34 69 aa5.84□□□□□ -1.48
GCM1-201ENST00000259803 SPACA4Q8TDM5 124 aa5.83□□□□□ -1.48
GCM1-201ENST00000259803 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
GCM1-201ENST00000259803 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
GCM1-201ENST00000259803 PCLOQ9Y6V0 5065 aa5.82□□□□□ -1.48
GCM1-201ENST00000259803 HERC2O95714 4834 aa5.81□□□□□ -1.48
GCM1-201ENST00000259803 PLAC4Q8WY50 150 aa5.79□□□□□ -1.48
GCM1-201ENST00000259803 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
GCM1-201ENST00000259803 COX6B2Q6YFQ2 88 aa5.75□□□□□ -1.49
GCM1-201ENST00000259803 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
GCM1-201ENST00000259803 PKHD1L1Q86WI1 4243 aa5.72□□□□□ -1.49
GCM1-201ENST00000259803 PRLHP81277 87 aa5.71□□□□□ -1.5
GCM1-201ENST00000259803 RPL37P61927 97 aaKnown RBP5.71□□□□□ -1.5
GCM1-201ENST00000259803 IGKV2D-30A0A075B6S6 120 aa5.7□□□□□ -1.5
GCM1-201ENST00000259803 SPRR1BP22528 89 aa5.69□□□□□ -1.5
GCM1-201ENST00000259803 TYMSOSQ8TAI1 123 aa5.69□□□□□ -1.5
GCM1-201ENST00000259803 HERC1Q15751 4861 aa5.69□□□□□ -1.5
GCM1-201ENST00000259803 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
GCM1-201ENST00000259803 Q5VSD8 79 aa5.68□□□□□ -1.5
GCM1-201ENST00000259803 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
GCM1-201ENST00000259803 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
GCM1-201ENST00000259803 DMBT1Q9UGM3 2413 aaPredicted RBP5.64□□□□□ -1.51
GCM1-201ENST00000259803 SPINK1P00995 79 aa5.64□□□□□ -1.51
GCM1-201ENST00000259803 TNXBP22105 4242 aa5.62□□□□□ -1.51
GCM1-201ENST00000259803 KRTAP13-1Q8IUC0 172 aa5.59□□□□□ -1.52
GCM1-201ENST00000259803 INE1O15225 51 aa5.58□□□□□ -1.52
GCM1-201ENST00000259803 XP32Q5T750 250 aa5.55□□□□□ -1.52
GCM1-201ENST00000259803 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
GCM1-201ENST00000259803 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
GCM1-201ENST00000259803 LCE2AQ5TA79 106 aaPredicted RBP5.5□□□□□ -1.53
GCM1-201ENST00000259803 SPINK6Q6UWN8 80 aa5.49□□□□□ -1.53
GCM1-201ENST00000259803 KRTAP13-2Q52LG2 175 aa5.48□□□□□ -1.53
GCM1-201ENST00000259803 LPAP08519 4548 aa5.47□□□□□ -1.53
GCM1-201ENST00000259803 LRP2P98164 4655 aa5.44□□□□□ -1.54
GCM1-201ENST00000259803 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
GCM1-201ENST00000259803 HMCN2Q8NDA2 5059 aa5.39□□□□□ -1.55
GCM1-201ENST00000259803 S4R3F8 94 aa5.38□□□□□ -1.55
GCM1-201ENST00000259803 UBR4Q5T4S7 5183 aa5.38□□□□□ -1.55
GCM1-201ENST00000259803 MUC2Q02817 5179 aa5.37□□□□□ -1.55
GCM1-201ENST00000259803 KRTAP12-2P59991 146 aa5.37□□□□□ -1.55
GCM1-201ENST00000259803 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
GCM1-201ENST00000259803 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
GCM1-201ENST00000259803 A0A0D9SG42 100 aa5.33□□□□□ -1.56
GCM1-201ENST00000259803 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
GCM1-201ENST00000259803 PP632Q6XCG6 107 aa5.19□□□□□ -1.58
GCM1-201ENST00000259803 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
GCM1-201ENST00000259803 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
GCM1-201ENST00000259803 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.58
GCM1-201ENST00000259803 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
GCM1-201ENST00000259803 FAT4Q6V0I7 4981 aa5.13□□□□□ -1.59
GCM1-201ENST00000259803 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
GCM1-201ENST00000259803 RPS29P62273 56 aaKnown RBP5.09□□□□□ -1.59
GCM1-201ENST00000259803 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
GCM1-201ENST00000259803 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
GCM1-201ENST00000259803 M0QZ58 72 aa4.86□□□□□ -1.63
GCM1-201ENST00000259803 LOC100996750A0A140TA64 210 aa4.75□□□□□ -1.65
GCM1-201ENST00000259803 KRTAP4-6Q9BYQ5 205 aa4.75□□□□□ -1.65
GCM1-201ENST00000259803 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
GCM1-201ENST00000259803 KRTAP19-2Q3LHN2 52 aa4.72□□□□□ -1.65
GCM1-201ENST00000259803 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
GCM1-201ENST00000259803 MT1HP80294 61 aa4.6□□□□□ -1.67
GCM1-201ENST00000259803 M0R2T5 61 aa4.56□□□□□ -1.68
GCM1-201ENST00000259803 USH2AO75445 5202 aa4.54□□□□□ -1.68
GCM1-201ENST00000259803 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
GCM1-201ENST00000259803 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
GCM1-201ENST00000259803 KRTAP9-2Q9BYQ4 174 aa4.44□□□□□ -1.7
GCM1-201ENST00000259803 KRTAP4-8Q9BYQ9 185 aa4.42□□□□□ -1.7
GCM1-201ENST00000259803 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
GCM1-201ENST00000259803 KRTAP9-8Q9BYQ0 159 aa4.4□□□□□ -1.7
GCM1-201ENST00000259803 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.7
GCM1-201ENST00000259803 MT1FP04733 61 aa4.37□□□□□ -1.71
GCM1-201ENST00000259803 MT2AP02795 61 aa4.36□□□□□ -1.71
GCM1-201ENST00000259803 TNP1P09430 55 aa4.35□□□□□ -1.71
GCM1-201ENST00000259803 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.72
GCM1-201ENST00000259803 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
GCM1-201ENST00000259803 SSPOA2VEC9 5147 aa4.29□□□□□ -1.72
GCM1-201ENST00000259803 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
GCM1-201ENST00000259803 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
GCM1-201ENST00000259803 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
GCM1-201ENST00000259803 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
GCM1-201ENST00000259803 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
GCM1-201ENST00000259803 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
GCM1-201ENST00000259803 KMT2DO14686 5537 aa4.09□□□□□ -1.76
GCM1-201ENST00000259803 SPRR2GQ9BYE4 73 aa4.08□□□□□ -1.76
GCM1-201ENST00000259803 MT1BP07438 61 aa4.05□□□□□ -1.76
GCM1-201ENST00000259803 KRTAP4-8A0A0G2JLE6 195 aa4.04□□□□□ -1.76
GCM1-201ENST00000259803 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
GCM1-201ENST00000259803 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
GCM1-201ENST00000259803 LCE1AQ5T7P2 110 aa4.02□□□□□ -1.77
GCM1-201ENST00000259803 MACF1Q9UPN3 7388 aaKnown RBP4.01□□□□□ -1.77
GCM1-201ENST00000259803 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
GCM1-201ENST00000259803 CRCT1Q9UGL9 99 aa4□□□□□ -1.77
GCM1-201ENST00000259803 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms