RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MT2AP02795 61 aa6.7□□□□□ -1.34
VPS25-201ENST00000253794 NDUFC1O43677 76 aa6.69□□□□□ -1.34
VPS25-201ENST00000253794 H7BZZ5 65 aa6.65□□□□□ -1.34
VPS25-201ENST00000253794 ACYP2P14621 99 aa6.65□□□□□ -1.34
VPS25-201ENST00000253794 LCE2DQ5TA82 110 aaPredicted RBP6.65□□□□□ -1.34
VPS25-201ENST00000253794 MT1FP04733 61 aa6.64□□□□□ -1.35
VPS25-201ENST00000253794 CYSTM1Q9H1C7 97 aa6.64□□□□□ -1.35
VPS25-201ENST00000253794 CCDC179H3BU77 68 aa6.61□□□□□ -1.35
VPS25-201ENST00000253794 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
VPS25-201ENST00000253794 H0YAA0 97 aa6.58□□□□□ -1.36
VPS25-201ENST00000253794 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
VPS25-201ENST00000253794 KRTAP9-3Q9BYQ3 159 aa6.55□□□□□ -1.36
VPS25-201ENST00000253794 SPTSSBQ8NFR3 76 aa6.5□□□□□ -1.37
VPS25-201ENST00000253794 CHKB-CPT1BH3BT56 60 aa6.49□□□□□ -1.37
VPS25-201ENST00000253794 COA5Q86WW8 74 aa6.48□□□□□ -1.37
VPS25-201ENST00000253794 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
VPS25-201ENST00000253794 TMEM258P61165 79 aa6.43□□□□□ -1.38
VPS25-201ENST00000253794 CRIPTQ9P021 101 aa6.43□□□□□ -1.38
VPS25-201ENST00000253794 ADM2Q7Z4H4 148 aa6.42□□□□□ -1.38
VPS25-201ENST00000253794 LCE2BO14633 110 aa6.41□□□□□ -1.38
VPS25-201ENST00000253794 KRTAP19-1Q8IUB9 90 aa6.4□□□□□ -1.38
VPS25-201ENST00000253794 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.38
VPS25-201ENST00000253794 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
VPS25-201ENST00000253794 USH2AO75445 5202 aa6.37□□□□□ -1.39
VPS25-201ENST00000253794 P0C880 135 aa6.34□□□□□ -1.39
VPS25-201ENST00000253794 KRTAP19-8Q3LI54 63 aa6.3□□□□□ -1.4
VPS25-201ENST00000253794 PCP4P48539 62 aa6.29□□□□□ -1.4
VPS25-201ENST00000253794 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
VPS25-201ENST00000253794 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
VPS25-201ENST00000253794 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
VPS25-201ENST00000253794 R4GN34 69 aa6.24□□□□□ -1.41
VPS25-201ENST00000253794 MT1BP07438 61 aa6.22□□□□□ -1.41
VPS25-201ENST00000253794 SERP1Q9Y6X1 66 aa6.21□□□□□ -1.42
VPS25-201ENST00000253794 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
VPS25-201ENST00000253794 Q5VV11 94 aa6.2□□□□□ -1.42
VPS25-201ENST00000253794 M0QZ58 72 aa6.19□□□□□ -1.42
VPS25-201ENST00000253794 SEC61GP60059 68 aa6.19□□□□□ -1.42
VPS25-201ENST00000253794 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
VPS25-201ENST00000253794 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
VPS25-201ENST00000253794 A0A1B0GU69 56 aa6.11□□□□□ -1.43
VPS25-201ENST00000253794 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
VPS25-201ENST00000253794 A0A1B0GU33 70 aa6.07□□□□□ -1.44
VPS25-201ENST00000253794 A6NN06 94 aa6.06□□□□□ -1.44
VPS25-201ENST00000253794 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
VPS25-201ENST00000253794 RPS28P62857 69 aaKnown RBP6.05□□□□□ -1.44
VPS25-201ENST00000253794 FCGBPQ9Y6R7 5405 aaPredicted RBP6.04□□□□□ -1.44
VPS25-201ENST00000253794 LINC01554Q52M75 96 aa6.04□□□□□ -1.44
VPS25-201ENST00000253794 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
VPS25-201ENST00000253794 KRTAP10-5P60370 271 aa6□□□□□ -1.45
VPS25-201ENST00000253794 V9GYY9 64 aa6□□□□□ -1.45
VPS25-201ENST00000253794 Q1T7F1 81 aa5.99□□□□□ -1.45
VPS25-201ENST00000253794 SMIM26A0A096LP01 95 aa5.98□□□□□ -1.45
VPS25-201ENST00000253794 SPATA8Q6RVD6 105 aa5.97□□□□□ -1.45
VPS25-201ENST00000253794 MT1XP80297 61 aa5.92□□□□□ -1.46
VPS25-201ENST00000253794 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.46
VPS25-201ENST00000253794 A0A0D9SG42 100 aa5.88□□□□□ -1.47
VPS25-201ENST00000253794 UQCR11O14957 56 aa5.88□□□□□ -1.47
VPS25-201ENST00000253794 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
VPS25-201ENST00000253794 PSPHP1O15172 72 aa5.84□□□□□ -1.47
VPS25-201ENST00000253794 A8MU10 97 aa5.82□□□□□ -1.48
VPS25-201ENST00000253794 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
VPS25-201ENST00000253794 KRTAP12-2P59991 146 aa5.79□□□□□ -1.48
VPS25-201ENST00000253794 SPINT4Q6UDR6 99 aa5.77□□□□□ -1.49
VPS25-201ENST00000253794 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
VPS25-201ENST00000253794 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
VPS25-201ENST00000253794 MACF1Q9UPN3 7388 aaKnown RBP5.71□□□□□ -1.5
VPS25-201ENST00000253794 A6NED7 52 aa5.67□□□□□ -1.5
VPS25-201ENST00000253794 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
VPS25-201ENST00000253794 KRTAP10-7P60409 375 aaPredicted RBP5.63□□□□□ -1.51
VPS25-201ENST00000253794 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
VPS25-201ENST00000253794 SYNE2Q8WXH0 6885 aaKnown RBP5.6□□□□□ -1.51
VPS25-201ENST00000253794 KRTAP6-3Q3LI67 103 aa5.6□□□□□ -1.51
VPS25-201ENST00000253794 K7ERS5 55 aa5.57□□□□□ -1.52
VPS25-201ENST00000253794 CDC42SE1Q9NRR8 79 aa5.56□□□□□ -1.52
VPS25-201ENST00000253794 C10orf95Q9H7T3 257 aa5.55□□□□□ -1.52
VPS25-201ENST00000253794 KMT2DO14686 5537 aa5.54□□□□□ -1.52
VPS25-201ENST00000253794 KRTAP5-9P26371 169 aa5.53□□□□□ -1.52
VPS25-201ENST00000253794 KRTAP4-8A0A0G2JLE6 195 aa5.5□□□□□ -1.53
VPS25-201ENST00000253794 KRTAP4-8Q9BYQ9 185 aa5.5□□□□□ -1.53
VPS25-201ENST00000253794 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
VPS25-201ENST00000253794 TNP1P09430 55 aa5.45□□□□□ -1.54
VPS25-201ENST00000253794 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
VPS25-201ENST00000253794 MUC12Q9UKN1 5478 aa5.36□□□□□ -1.55
VPS25-201ENST00000253794 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
VPS25-201ENST00000253794 MDN1Q9NU22 5596 aa5.31□□□□□ -1.56
VPS25-201ENST00000253794 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
VPS25-201ENST00000253794 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
VPS25-201ENST00000253794 ROMO1P60602 79 aa5.29□□□□□ -1.56
VPS25-201ENST00000253794 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
VPS25-201ENST00000253794 NEBP20929 6669 aa5.27□□□□□ -1.57
VPS25-201ENST00000253794 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
VPS25-201ENST00000253794 MT1EP04732 61 aa5.23□□□□□ -1.57
VPS25-201ENST00000253794 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
VPS25-201ENST00000253794 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
VPS25-201ENST00000253794 SPRR2EP22531 72 aa5.19□□□□□ -1.58
VPS25-201ENST00000253794 SPRR2BP35325 72 aa5.19□□□□□ -1.58
VPS25-201ENST00000253794 SPRR2AP35326 72 aa5.19□□□□□ -1.58
VPS25-201ENST00000253794 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
VPS25-201ENST00000253794 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
VPS25-201ENST00000253794 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms