RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 MT2AP02795 61 aa10.84□□□□□ -0.67
APOE-201ENST00000252486 NDUFC1O43677 76 aa10.83□□□□□ -0.68
APOE-201ENST00000252486 SPANXA2-OT1Q8N9U9 137 aa10.82□□□□□ -0.68
APOE-201ENST00000252486 KRTAP3-3Q9BYR6 98 aa10.81□□□□□ -0.68
APOE-201ENST00000252486 LCE2DQ5TA82 110 aaPredicted RBP10.8□□□□□ -0.68
APOE-201ENST00000252486 ACYP2P14621 99 aa10.78□□□□□ -0.68
APOE-201ENST00000252486 KRTAP10-10P60014 251 aa10.76□□□□□ -0.69
APOE-201ENST00000252486 MT1FP04733 61 aa10.75□□□□□ -0.69
APOE-201ENST00000252486 H7BZZ5 65 aa10.64□□□□□ -0.71
APOE-201ENST00000252486 H0YAA0 97 aa10.59□□□□□ -0.71
APOE-201ENST00000252486 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
APOE-201ENST00000252486 SPTSSBQ8NFR3 76 aa10.59□□□□□ -0.71
APOE-201ENST00000252486 CYSTM1Q9H1C7 97 aa10.59□□□□□ -0.71
APOE-201ENST00000252486 CCDC179H3BU77 68 aa10.58□□□□□ -0.72
APOE-201ENST00000252486 KRTAP9-3Q9BYQ3 159 aa10.57□□□□□ -0.72
APOE-201ENST00000252486 CRCT1Q9UGL9 99 aa10.52□□□□□ -0.73
APOE-201ENST00000252486 FSIP2Q5CZC0 6907 aa10.49□□□□□ -0.73
APOE-201ENST00000252486 ADM2Q7Z4H4 148 aa10.44□□□□□ -0.74
APOE-201ENST00000252486 COA5Q86WW8 74 aa10.44□□□□□ -0.74
APOE-201ENST00000252486 CRIPTQ9P021 101 aa10.41□□□□□ -0.74
APOE-201ENST00000252486 ATP5EP56381 51 aaPredicted RBP10.39□□□□□ -0.75
APOE-201ENST00000252486 LCE2BO14633 110 aa10.37□□□□□ -0.75
APOE-201ENST00000252486 KRTAP19-1Q8IUB9 90 aa10.3□□□□□ -0.76
APOE-201ENST00000252486 SPRR2GQ9BYE4 73 aa10.3□□□□□ -0.76
APOE-201ENST00000252486 TMEM258P61165 79 aa10.29□□□□□ -0.76
APOE-201ENST00000252486 KRTAP3-2Q9BYR7 98 aa10.25□□□□□ -0.77
APOE-201ENST00000252486 P0C880 135 aa10.24□□□□□ -0.77
APOE-201ENST00000252486 USH2AO75445 5202 aa10.24□□□□□ -0.77
APOE-201ENST00000252486 R4GN34 69 aa10.16□□□□□ -0.78
APOE-201ENST00000252486 KRTAP19-8Q3LI54 63 aa10.15□□□□□ -0.78
APOE-201ENST00000252486 Q5VV11 94 aa10.12□□□□□ -0.79
APOE-201ENST00000252486 SEC61GP60059 68 aa10.11□□□□□ -0.79
APOE-201ENST00000252486 M0QZ58 72 aa10.08□□□□□ -0.8
APOE-201ENST00000252486 SERP1Q9Y6X1 66 aa10.07□□□□□ -0.8
APOE-201ENST00000252486 PCP4P48539 62 aa10.04□□□□□ -0.8
APOE-201ENST00000252486 MT1BP07438 61 aa10.02□□□□□ -0.81
APOE-201ENST00000252486 SSPOA2VEC9 5147 aa9.97□□□□□ -0.81
APOE-201ENST00000252486 KRTAP19-6Q3LI70 58 aa9.97□□□□□ -0.81
APOE-201ENST00000252486 A0A1B0GU69 56 aa9.92□□□□□ -0.82
APOE-201ENST00000252486 LINC01554Q52M75 96 aa9.88□□□□□ -0.83
APOE-201ENST00000252486 PLAC4Q8WY50 150 aa9.85□□□□□ -0.83
APOE-201ENST00000252486 PRR15LQ9BU68 103 aa9.84□□□□□ -0.83
APOE-201ENST00000252486 A0A1B0GU33 70 aa9.83□□□□□ -0.84
APOE-201ENST00000252486 KRTAP9-7A8MTY7 169 aa9.83□□□□□ -0.84
APOE-201ENST00000252486 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
APOE-201ENST00000252486 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.82□□□□□ -0.84
APOE-201ENST00000252486 KRTAP13-4Q3LI77 160 aa9.78□□□□□ -0.84
APOE-201ENST00000252486 FCGBPQ9Y6R7 5405 aaPredicted RBP9.75□□□□□ -0.85
APOE-201ENST00000252486 A6NN06 94 aa9.75□□□□□ -0.85
APOE-201ENST00000252486 KRTAP10-5P60370 271 aa9.71□□□□□ -0.86
APOE-201ENST00000252486 V9GYY9 64 aa9.67□□□□□ -0.86
APOE-201ENST00000252486 SPATA8Q6RVD6 105 aa9.65□□□□□ -0.86
APOE-201ENST00000252486 PRO2289Q9P1D8 64 aa9.64□□□□□ -0.87
APOE-201ENST00000252486 RPS28P62857 69 aaKnown RBP9.63□□□□□ -0.87
APOE-201ENST00000252486 SMIM26A0A096LP01 95 aa9.61□□□□□ -0.87
APOE-201ENST00000252486 Q1T7F1 81 aa9.58□□□□□ -0.88
APOE-201ENST00000252486 A0A0D9SG42 100 aa9.57□□□□□ -0.88
APOE-201ENST00000252486 MT1XP80297 61 aa9.53□□□□□ -0.88
APOE-201ENST00000252486 UQCR11O14957 56 aa9.5□□□□□ -0.89
APOE-201ENST00000252486 CAMK2N1Q7Z7J9 78 aa9.44□□□□□ -0.9
APOE-201ENST00000252486 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
APOE-201ENST00000252486 PSPHP1O15172 72 aa9.42□□□□□ -0.9
APOE-201ENST00000252486 KRTAP12-1P59990 96 aa9.41□□□□□ -0.9
APOE-201ENST00000252486 A8MU10 97 aa9.4□□□□□ -0.9
APOE-201ENST00000252486 MACF1Q9UPN3 7388 aaKnown RBP9.34□□□□□ -0.91
APOE-201ENST00000252486 KRTAP12-2P59991 146 aa9.32□□□□□ -0.92
APOE-201ENST00000252486 MIR22HGQ0VDD5 57 aa9.31□□□□□ -0.92
APOE-201ENST00000252486 SYNE2Q8WXH0 6885 aaKnown RBP9.27□□□□□ -0.93
APOE-201ENST00000252486 A6NED7 52 aa9.18□□□□□ -0.94
APOE-201ENST00000252486 KRTAP6-3Q3LI67 103 aa9.11□□□□□ -0.95
APOE-201ENST00000252486 K7ERS5 55 aa9.1□□□□□ -0.95
APOE-201ENST00000252486 KRTAP10-7P60409 375 aaPredicted RBP9.1□□□□□ -0.95
APOE-201ENST00000252486 KRTAP10-12P60413 245 aa9.09□□□□□ -0.95
APOE-201ENST00000252486 KRTAP8-1Q8IUC2 63 aa8.95□□□□□ -0.98
APOE-201ENST00000252486 C10orf95Q9H7T3 257 aa8.92□□□□□ -0.98
APOE-201ENST00000252486 KRTAP5-9P26371 169 aa8.91□□□□□ -0.98
APOE-201ENST00000252486 CDC42SE1Q9NRR8 79 aa8.91□□□□□ -0.98
APOE-201ENST00000252486 KMT2DO14686 5537 aa8.91□□□□□ -0.98
APOE-201ENST00000252486 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
APOE-201ENST00000252486 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
APOE-201ENST00000252486 TNP1P09430 55 aa8.86□□□□□ -0.99
APOE-201ENST00000252486 SPRR2FQ96RM1 72 aa8.77□□□□□ -1.01
APOE-201ENST00000252486 NEBP20929 6669 aa8.76□□□□□ -1.01
APOE-201ENST00000252486 MUC12Q9UKN1 5478 aa8.7□□□□□ -1.02
APOE-201ENST00000252486 KRTAP25-1Q3LHN0 102 aa8.66□□□□□ -1.02
APOE-201ENST00000252486 KRTAP20-1Q3LI63 56 aa8.56□□□□□ -1.04
APOE-201ENST00000252486 LCE3AQ5TA76 89 aa8.55□□□□□ -1.04
APOE-201ENST00000252486 ROMO1P60602 79 aa8.53□□□□□ -1.04
APOE-201ENST00000252486 MDN1Q9NU22 5596 aa8.53□□□□□ -1.04
APOE-201ENST00000252486 SPRR2EP22531 72 aa8.52□□□□□ -1.05
APOE-201ENST00000252486 SPRR2BP35325 72 aa8.52□□□□□ -1.05
APOE-201ENST00000252486 SPRR2AP35326 72 aa8.52□□□□□ -1.05
APOE-201ENST00000252486 KRTAP19-7Q3SYF9 63 aa8.52□□□□□ -1.05
APOE-201ENST00000252486 BRK1Q8WUW1 75 aa8.52□□□□□ -1.05
APOE-201ENST00000252486 LCE1AQ5T7P2 110 aa8.47□□□□□ -1.05
APOE-201ENST00000252486 KRTAP19-5Q3LI72 72 aa8.45□□□□□ -1.06
APOE-201ENST00000252486 MT1EP04732 61 aa8.42□□□□□ -1.06
APOE-201ENST00000252486 KRTAP23-1A1A580 65 aa8.4□□□□□ -1.06
APOE-201ENST00000252486 KRTAP12-3P60328 96 aa8.26□□□□□ -1.09
APOE-201ENST00000252486 KRTAP19-3Q7Z4W3 81 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms