RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
APOBEC3A-201ENST00000249116 C7orf65Q6ZTY9 151 aa6.22□□□□□ -1.41
APOBEC3A-201ENST00000249116 TP53AIP1Q9HCN2 124 aa6.21□□□□□ -1.42
APOBEC3A-201ENST00000249116 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
APOBEC3A-201ENST00000249116 KRTAP19-6Q3LI70 58 aa6.19□□□□□ -1.42
APOBEC3A-201ENST00000249116 A0A087WVE0 104 aa6.17□□□□□ -1.42
APOBEC3A-201ENST00000249116 H1FX-AS1Q4G0G2 97 aa6.12□□□□□ -1.43
APOBEC3A-201ENST00000249116 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
APOBEC3A-201ENST00000249116 UQCRQO14949 82 aa6.08□□□□□ -1.44
APOBEC3A-201ENST00000249116 C4orf26Q17RF5 130 aa6.08□□□□□ -1.44
APOBEC3A-201ENST00000249116 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
APOBEC3A-201ENST00000249116 LOC101927531A0A1B0GV80 90 aa6.06□□□□□ -1.44
APOBEC3A-201ENST00000249116 H0Y9P7 68 aa6.05□□□□□ -1.44
APOBEC3A-201ENST00000249116 CYP4F30PQ9H0H9 118 aa6.05□□□□□ -1.44
APOBEC3A-201ENST00000249116 ATOX1O00244 68 aa6.04□□□□□ -1.44
APOBEC3A-201ENST00000249116 OCR1Q9BZK8 76 aa6.04□□□□□ -1.44
APOBEC3A-201ENST00000249116 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
APOBEC3A-201ENST00000249116 MT-ATP8P03928 68 aa6.03□□□□□ -1.44
APOBEC3A-201ENST00000249116 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
APOBEC3A-201ENST00000249116 IMUPQ9GZP8 106 aa6.01□□□□□ -1.45
APOBEC3A-201ENST00000249116 C1orf64Q8NEQ6 169 aa6□□□□□ -1.45
APOBEC3A-201ENST00000249116 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
APOBEC3A-201ENST00000249116 MP68P56378 58 aa5.96□□□□□ -1.46
APOBEC3A-201ENST00000249116 C5orf47Q569G3 176 aa5.94□□□□□ -1.46
APOBEC3A-201ENST00000249116 FAM236AA0A1B0GUQ0 79 aa5.93□□□□□ -1.46
APOBEC3A-201ENST00000249116 FAM236BA0A1B0GV22 79 aa5.93□□□□□ -1.46
APOBEC3A-201ENST00000249116 S4R3F8 94 aa5.93□□□□□ -1.46
APOBEC3A-201ENST00000249116 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
APOBEC3A-201ENST00000249116 H3BPC8 53 aa5.91□□□□□ -1.46
APOBEC3A-201ENST00000249116 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
APOBEC3A-201ENST00000249116 LCA10Q71F78 164 aa5.9□□□□□ -1.47
APOBEC3A-201ENST00000249116 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
APOBEC3A-201ENST00000249116 A6NN06 94 aa5.87□□□□□ -1.47
APOBEC3A-201ENST00000249116 SEC61GP60059 68 aa5.87□□□□□ -1.47
APOBEC3A-201ENST00000249116 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
APOBEC3A-201ENST00000249116 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
APOBEC3A-201ENST00000249116 Q5VV11 94 aa5.85□□□□□ -1.47
APOBEC3A-201ENST00000249116 CSAG1Q6PB30 78 aa5.85□□□□□ -1.47
APOBEC3A-201ENST00000249116 A8MUN3 132 aa5.83□□□□□ -1.48
APOBEC3A-201ENST00000249116 MT1BP07438 61 aa5.82□□□□□ -1.48
APOBEC3A-201ENST00000249116 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
APOBEC3A-201ENST00000249116 SPRR2GQ9BYE4 73 aa5.8□□□□□ -1.48
APOBEC3A-201ENST00000249116 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
APOBEC3A-201ENST00000249116 NDUFC1O43677 76 aa5.74□□□□□ -1.49
APOBEC3A-201ENST00000249116 KRTAP10-5P60370 271 aa5.74□□□□□ -1.49
APOBEC3A-201ENST00000249116 SERP2Q8N6R1 65 aa5.74□□□□□ -1.49
APOBEC3A-201ENST00000249116 ANAPC13Q9BS18 74 aa5.74□□□□□ -1.49
APOBEC3A-201ENST00000249116 SNURFQ9Y675 71 aa5.73□□□□□ -1.49
APOBEC3A-201ENST00000249116 NEBP20929 6669 aa5.7□□□□□ -1.5
APOBEC3A-201ENST00000249116 C20orf197Q8N268 126 aa5.69□□□□□ -1.5
APOBEC3A-201ENST00000249116 CRIPTQ9P021 101 aa5.68□□□□□ -1.5
APOBEC3A-201ENST00000249116 MUC12Q9UKN1 5478 aa5.67□□□□□ -1.5
APOBEC3A-201ENST00000249116 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
APOBEC3A-201ENST00000249116 H0YAA0 97 aa5.65□□□□□ -1.5
APOBEC3A-201ENST00000249116 KRTAP5-9P26371 169 aa5.65□□□□□ -1.51
APOBEC3A-201ENST00000249116 ACYP2P14621 99 aa5.64□□□□□ -1.51
APOBEC3A-201ENST00000249116 COX7CP15954 63 aa5.63□□□□□ -1.51
APOBEC3A-201ENST00000249116 SPANXA2-OT1Q8N9U9 137 aa5.62□□□□□ -1.51
APOBEC3A-201ENST00000249116 RPS28P62857 69 aaKnown RBP5.61□□□□□ -1.51
APOBEC3A-201ENST00000249116 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
APOBEC3A-201ENST00000249116 CCDC179H3BU77 68 aa5.55□□□□□ -1.52
APOBEC3A-201ENST00000249116 V9GYY9 64 aa5.55□□□□□ -1.52
APOBEC3A-201ENST00000249116 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
APOBEC3A-201ENST00000249116 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
APOBEC3A-201ENST00000249116 KMT2DO14686 5537 aa5.53□□□□□ -1.52
APOBEC3A-201ENST00000249116 A0A0A0MQY5 61 aa5.52□□□□□ -1.53
APOBEC3A-201ENST00000249116 CYSTM1Q9H1C7 97 aa5.52□□□□□ -1.53
APOBEC3A-201ENST00000249116 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
APOBEC3A-201ENST00000249116 H7BZZ5 65 aa5.5□□□□□ -1.53
APOBEC3A-201ENST00000249116 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
APOBEC3A-201ENST00000249116 P0C880 135 aa5.49□□□□□ -1.53
APOBEC3A-201ENST00000249116 TMEM258P61165 79 aa5.48□□□□□ -1.53
APOBEC3A-201ENST00000249116 KRTAP2-3P0C7H8 128 aa5.47□□□□□ -1.53
APOBEC3A-201ENST00000249116 KRTAP2-4Q9BYR9 128 aa5.47□□□□□ -1.53
APOBEC3A-201ENST00000249116 COA5Q86WW8 74 aa5.46□□□□□ -1.54
APOBEC3A-201ENST00000249116 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
APOBEC3A-201ENST00000249116 PLAC4Q8WY50 150 aa5.44□□□□□ -1.54
APOBEC3A-201ENST00000249116 R4GN34 69 aa5.43□□□□□ -1.54
APOBEC3A-201ENST00000249116 SPRR2EP22531 72 aa5.42□□□□□ -1.54
APOBEC3A-201ENST00000249116 SPRR2BP35325 72 aa5.42□□□□□ -1.54
APOBEC3A-201ENST00000249116 SPRR2AP35326 72 aa5.42□□□□□ -1.54
APOBEC3A-201ENST00000249116 M0QZ58 72 aa5.4□□□□□ -1.54
APOBEC3A-201ENST00000249116 MT1XP80297 61 aa5.4□□□□□ -1.54
APOBEC3A-201ENST00000249116 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
APOBEC3A-201ENST00000249116 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
APOBEC3A-201ENST00000249116 ATP5EP56381 51 aaPredicted RBP5.31□□□□□ -1.56
APOBEC3A-201ENST00000249116 LINC01554Q52M75 96 aa5.31□□□□□ -1.56
APOBEC3A-201ENST00000249116 PRO0628Q9UI54 55 aa5.31□□□□□ -1.56
APOBEC3A-201ENST00000249116 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
APOBEC3A-201ENST00000249116 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
APOBEC3A-201ENST00000249116 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
APOBEC3A-201ENST00000249116 SERP1Q9Y6X1 66 aa5.29□□□□□ -1.56
APOBEC3A-201ENST00000249116 SPRR2DP22532 72 aa5.25□□□□□ -1.57
APOBEC3A-201ENST00000249116 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
APOBEC3A-201ENST00000249116 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
APOBEC3A-201ENST00000249116 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
APOBEC3A-201ENST00000249116 A0A1B0GU69 56 aa5.15□□□□□ -1.58
APOBEC3A-201ENST00000249116 A0A1B0GU33 70 aa5.14□□□□□ -1.59
APOBEC3A-201ENST00000249116 KRTAP10-12P60413 245 aa5.14□□□□□ -1.59
APOBEC3A-201ENST00000249116 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms