RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 TPRXLQ17RH7 258 aa9.67□□□□□ -0.86
TUBA4A-201ENST00000248437 A8MU10 97 aa9.65□□□□□ -0.86
TUBA4A-201ENST00000248437 LPAP08519 4548 aa9.65□□□□□ -0.87
TUBA4A-201ENST00000248437 HERC1Q15751 4861 aa9.59□□□□□ -0.87
TUBA4A-201ENST00000248437 SEC61GP60059 68 aa9.56□□□□□ -0.88
TUBA4A-201ENST00000248437 LRP2P98164 4655 aa9.55□□□□□ -0.88
TUBA4A-201ENST00000248437 UQCR11O14957 56 aa9.52□□□□□ -0.89
TUBA4A-201ENST00000248437 SPATA8Q6RVD6 105 aa9.48□□□□□ -0.89
TUBA4A-201ENST00000248437 MIR22HGQ0VDD5 57 aa9.44□□□□□ -0.9
TUBA4A-201ENST00000248437 PMAIP1Q13794 54 aa9.44□□□□□ -0.9
TUBA4A-201ENST00000248437 HMCN2Q8NDA2 5059 aa9.4□□□□□ -0.91
TUBA4A-201ENST00000248437 KRTAP3-3Q9BYR6 98 aa9.39□□□□□ -0.91
TUBA4A-201ENST00000248437 S4R3F8 94 aa9.38□□□□□ -0.91
TUBA4A-201ENST00000248437 H1FX-AS1Q4G0G2 97 aa9.36□□□□□ -0.91
TUBA4A-201ENST00000248437 A6NN06 94 aa9.34□□□□□ -0.91
TUBA4A-201ENST00000248437 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
TUBA4A-201ENST00000248437 SEC61BP60468 96 aaKnown RBP9.31□□□□□ -0.92
TUBA4A-201ENST00000248437 A0A1B0GU33 70 aa9.31□□□□□ -0.92
TUBA4A-201ENST00000248437 H0YAA0 97 aa9.24□□□□□ -0.93
TUBA4A-201ENST00000248437 KRTAP10-6P60371 365 aaPredicted RBP9.19□□□□□ -0.94
TUBA4A-201ENST00000248437 KTN1-AS1Q86SY8 53 aa9.19□□□□□ -0.94
TUBA4A-201ENST00000248437 KRTAP3-2Q9BYR7 98 aa9.15□□□□□ -0.94
TUBA4A-201ENST00000248437 MUC17Q685J3 4493 aa9.14□□□□□ -0.95
TUBA4A-201ENST00000248437 MUC2Q02817 5179 aa9.13□□□□□ -0.95
TUBA4A-201ENST00000248437 KRTAP4-1Q9BYQ7 146 aa9.13□□□□□ -0.95
TUBA4A-201ENST00000248437 CSAG1Q6PB30 78 aa9.12□□□□□ -0.95
TUBA4A-201ENST00000248437 UBR4Q5T4S7 5183 aa9.07□□□□□ -0.96
TUBA4A-201ENST00000248437 P0C880 135 aa9.03□□□□□ -0.96
TUBA4A-201ENST00000248437 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
TUBA4A-201ENST00000248437 KRTAP13-4Q3LI77 160 aa8.98□□□□□ -0.97
TUBA4A-201ENST00000248437 K7ERS5 55 aa8.93□□□□□ -0.98
TUBA4A-201ENST00000248437 RNF213Q63HN8 5207 aa8.93□□□□□ -0.98
TUBA4A-201ENST00000248437 KRTAP19-2Q3LHN2 52 aa8.93□□□□□ -0.98
TUBA4A-201ENST00000248437 M0QZ58 72 aa8.85□□□□□ -0.99
TUBA4A-201ENST00000248437 A0A0D9SG42 100 aa8.84□□□□□ -0.99
TUBA4A-201ENST00000248437 PRAC1Q96KF2 57 aa8.79□□□□□ -1
TUBA4A-201ENST00000248437 FAT4Q6V0I7 4981 aa8.76□□□□□ -1.01
TUBA4A-201ENST00000248437 FLGP20930 4061 aaPredicted RBP8.69□□□□□ -1.02
TUBA4A-201ENST00000248437 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
TUBA4A-201ENST00000248437 R4GN34 69 aa8.67□□□□□ -1.02
TUBA4A-201ENST00000248437 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
TUBA4A-201ENST00000248437 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
TUBA4A-201ENST00000248437 ROMO1P60602 79 aa8.64□□□□□ -1.03
TUBA4A-201ENST00000248437 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
TUBA4A-201ENST00000248437 LORP23490 312 aaPredicted RBP8.58□□□□□ -1.04
TUBA4A-201ENST00000248437 LINC01554Q52M75 96 aa8.52□□□□□ -1.05
TUBA4A-201ENST00000248437 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
TUBA4A-201ENST00000248437 MT1HP80294 61 aa8.47□□□□□ -1.05
TUBA4A-201ENST00000248437 CRIPTQ9P021 101 aa8.45□□□□□ -1.06
TUBA4A-201ENST00000248437 M0R2T5 61 aa8.36□□□□□ -1.07
TUBA4A-201ENST00000248437 C10orf95Q9H7T3 257 aa8.2□□□□□ -1.1
TUBA4A-201ENST00000248437 SPRR2GQ9BYE4 73 aa8.17□□□□□ -1.1
TUBA4A-201ENST00000248437 LCE2AQ5TA79 106 aaPredicted RBP8.17□□□□□ -1.1
TUBA4A-201ENST00000248437 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
TUBA4A-201ENST00000248437 KRTAP9-8Q9BYQ0 159 aa8.15□□□□□ -1.11
TUBA4A-201ENST00000248437 MT2AP02795 61 aa8.12□□□□□ -1.11
TUBA4A-201ENST00000248437 KRTAP19-1Q8IUB9 90 aa8.1□□□□□ -1.11
TUBA4A-201ENST00000248437 MT1FP04733 61 aa8.1□□□□□ -1.11
TUBA4A-201ENST00000248437 KRTAP10-10P60014 251 aa8.05□□□□□ -1.12
TUBA4A-201ENST00000248437 PLAC4Q8WY50 150 aa7.98□□□□□ -1.13
TUBA4A-201ENST00000248437 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
TUBA4A-201ENST00000248437 PP632Q6XCG6 107 aa7.87□□□□□ -1.15
TUBA4A-201ENST00000248437 TNP1P09430 55 aa7.85□□□□□ -1.15
TUBA4A-201ENST00000248437 KRTAP9-3Q9BYQ3 159 aa7.85□□□□□ -1.15
TUBA4A-201ENST00000248437 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
TUBA4A-201ENST00000248437 MT1BP07438 61 aa7.74□□□□□ -1.17
TUBA4A-201ENST00000248437 LCE2BO14633 110 aa7.68□□□□□ -1.18
TUBA4A-201ENST00000248437 KRTAP15-1Q3LI76 137 aa7.64□□□□□ -1.19
TUBA4A-201ENST00000248437 USH2AO75445 5202 aa7.63□□□□□ -1.19
TUBA4A-201ENST00000248437 KRTAP10-5P60370 271 aa7.59□□□□□ -1.2
TUBA4A-201ENST00000248437 MT1XP80297 61 aa7.59□□□□□ -1.2
TUBA4A-201ENST00000248437 PRO2289Q9P1D8 64 aa7.45□□□□□ -1.22
TUBA4A-201ENST00000248437 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
TUBA4A-201ENST00000248437 LCE3AQ5TA76 89 aa7.43□□□□□ -1.22
TUBA4A-201ENST00000248437 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
TUBA4A-201ENST00000248437 LCE2DQ5TA82 110 aaPredicted RBP7.36□□□□□ -1.23
TUBA4A-201ENST00000248437 KRTAP10-12P60413 245 aa7.33□□□□□ -1.24
TUBA4A-201ENST00000248437 KRTAP8-1Q8IUC2 63 aa7.33□□□□□ -1.24
TUBA4A-201ENST00000248437 KRTAP10-7P60409 375 aaPredicted RBP7.3□□□□□ -1.24
TUBA4A-201ENST00000248437 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
TUBA4A-201ENST00000248437 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
TUBA4A-201ENST00000248437 SPRR5A0A1B0GTR4 108 aa7.15□□□□□ -1.26
TUBA4A-201ENST00000248437 KRTAP19-6Q3LI70 58 aa7.15□□□□□ -1.27
TUBA4A-201ENST00000248437 KRTAP12-3P60328 96 aa7.13□□□□□ -1.27
TUBA4A-201ENST00000248437 LUZP6Q538Z0 58 aa7.09□□□□□ -1.27
TUBA4A-201ENST00000248437 KMT2DO14686 5537 aa7.04□□□□□ -1.28
TUBA4A-201ENST00000248437 FCGBPQ9Y6R7 5405 aaPredicted RBP7.03□□□□□ -1.28
TUBA4A-201ENST00000248437 H3BS24 57 aa7.01□□□□□ -1.29
TUBA4A-201ENST00000248437 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
TUBA4A-201ENST00000248437 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
TUBA4A-201ENST00000248437 KRTAP4-8Q9BYQ9 185 aa6.91□□□□□ -1.3
TUBA4A-201ENST00000248437 CRCT1Q9UGL9 99 aa6.9□□□□□ -1.3
TUBA4A-201ENST00000248437 KRTAP19-7Q3SYF9 63 aa6.77□□□□□ -1.33
TUBA4A-201ENST00000248437 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
TUBA4A-201ENST00000248437 MACF1Q9UPN3 7388 aaKnown RBP6.69□□□□□ -1.34
TUBA4A-201ENST00000248437 KRTAP19-4Q3LI73 84 aa6.64□□□□□ -1.35
TUBA4A-201ENST00000248437 KRTAP9-6A0A140TA67 174 aa6.63□□□□□ -1.35
TUBA4A-201ENST00000248437 MT1EP04732 61 aa6.62□□□□□ -1.35
TUBA4A-201ENST00000248437 SYNE2Q8WXH0 6885 aaKnown RBP6.55□□□□□ -1.36
TUBA4A-201ENST00000248437 MT1LQ93083 61 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms