RNA–Protein interactions for RNA: ENST00000242261.5

TWIST1-201, Transcript of twist family bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TWIST1, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWIST1-201ENST00000242261 V9GYY9 64 aa14.19□□□□□ -0.14
TWIST1-201ENST00000242261 H1FX-AS1Q4G0G2 97 aa14.17□□□□□ -0.14
TWIST1-201ENST00000242261 Q1T7F1 81 aa14.17□□□□□ -0.14
TWIST1-201ENST00000242261 S4R3F8 94 aa14.09□□□□□ -0.15
TWIST1-201ENST00000242261 LINC01558Q9Y6Z2 57 aa14.04□□□□□ -0.16
TWIST1-201ENST00000242261 LCA10Q71F78 164 aa14.01□□□□□ -0.17
TWIST1-201ENST00000242261 PRR15LQ9BU68 103 aa13.95□□□□□ -0.18
TWIST1-201ENST00000242261 PSPHP1O15172 72 aa13.92□□□□□ -0.18
TWIST1-201ENST00000242261 A0A1B0GU69 56 aa13.86□□□□□ -0.19
TWIST1-201ENST00000242261 SEC61GP60059 68 aa13.83□□□□□ -0.2
TWIST1-201ENST00000242261 KRTAP19-2Q3LHN2 52 aa13.81□□□□□ -0.2
TWIST1-201ENST00000242261 CSAG1Q6PB30 78 aa13.78□□□□□ -0.2
TWIST1-201ENST00000242261 Q5VV11 94 aa13.76□□□□□ -0.21
TWIST1-201ENST00000242261 MUC2Q02817 5179 aa13.69□□□□□ -0.22
TWIST1-201ENST00000242261 UBR4Q5T4S7 5183 aa13.67□□□□□ -0.22
TWIST1-201ENST00000242261 RNF213Q63HN8 5207 aa13.59□□□□□ -0.23
TWIST1-201ENST00000242261 A6NED7 52 aa13.55□□□□□ -0.24
TWIST1-201ENST00000242261 LCE2CQ5TA81 110 aa13.5□□□□□ -0.25
TWIST1-201ENST00000242261 ADM2Q7Z4H4 148 aa13.46□□□□□ -0.26
TWIST1-201ENST00000242261 UQCR11O14957 56 aa13.44□□□□□ -0.26
TWIST1-201ENST00000242261 H0YAA0 97 aa13.44□□□□□ -0.26
TWIST1-201ENST00000242261 A0A1B0GU33 70 aa13.42□□□□□ -0.26
TWIST1-201ENST00000242261 BRK1Q8WUW1 75 aa13.4□□□□□ -0.26
TWIST1-201ENST00000242261 KRTAP10-6P60371 365 aaPredicted RBP13.4□□□□□ -0.26
TWIST1-201ENST00000242261 FLGP20930 4061 aaPredicted RBP13.39□□□□□ -0.27
TWIST1-201ENST00000242261 P0C880 135 aa13.32□□□□□ -0.28
TWIST1-201ENST00000242261 M0R2T5 61 aa13.28□□□□□ -0.28
TWIST1-201ENST00000242261 MT1HP80294 61 aa13.28□□□□□ -0.28
TWIST1-201ENST00000242261 MIR22HGQ0VDD5 57 aa13.28□□□□□ -0.28
TWIST1-201ENST00000242261 CDC42SE1Q9NRR8 79 aa13.28□□□□□ -0.28
TWIST1-201ENST00000242261 LCE2BO14633 110 aa13.22□□□□□ -0.29
TWIST1-201ENST00000242261 SPATA8Q6RVD6 105 aa13.22□□□□□ -0.29
TWIST1-201ENST00000242261 FAT4Q6V0I7 4981 aa13.16□□□□□ -0.3
TWIST1-201ENST00000242261 A8MU10 97 aa13.1□□□□□ -0.31
TWIST1-201ENST00000242261 PRO0628Q9UI54 55 aa13.1□□□□□ -0.31
TWIST1-201ENST00000242261 M0QZ58 72 aa13.06□□□□□ -0.32
TWIST1-201ENST00000242261 KRTAP13-4Q3LI77 160 aa13.03□□□□□ -0.32
TWIST1-201ENST00000242261 R4GN34 69 aa13.01□□□□□ -0.33
TWIST1-201ENST00000242261 LORP23490 312 aaPredicted RBP12.9□□□□□ -0.34
TWIST1-201ENST00000242261 CRIPTQ9P021 101 aa12.89□□□□□ -0.35
TWIST1-201ENST00000242261 A0A0D9SG42 100 aa12.89□□□□□ -0.35
TWIST1-201ENST00000242261 K7ERS5 55 aa12.77□□□□□ -0.36
TWIST1-201ENST00000242261 MT2AP02795 61 aa12.77□□□□□ -0.37
TWIST1-201ENST00000242261 KRTAP9-8Q9BYQ0 159 aa12.77□□□□□ -0.37
TWIST1-201ENST00000242261 LINC01554Q52M75 96 aa12.76□□□□□ -0.37
TWIST1-201ENST00000242261 KRTAP10-10P60014 251 aa12.73□□□□□ -0.37
TWIST1-201ENST00000242261 LCE2AQ5TA79 106 aaPredicted RBP12.7□□□□□ -0.38
TWIST1-201ENST00000242261 MT1FP04733 61 aa12.69□□□□□ -0.38
TWIST1-201ENST00000242261 PMAIP1Q13794 54 aa12.67□□□□□ -0.38
TWIST1-201ENST00000242261 SPINT4Q6UDR6 99 aa12.61□□□□□ -0.39
TWIST1-201ENST00000242261 KRTAP12-1P59990 96 aa12.57□□□□□ -0.4
TWIST1-201ENST00000242261 KRTAP12-2P59991 146 aa12.54□□□□□ -0.4
TWIST1-201ENST00000242261 A6NN06 94 aa12.54□□□□□ -0.4
TWIST1-201ENST00000242261 SPRR2GQ9BYE4 73 aa12.54□□□□□ -0.4
TWIST1-201ENST00000242261 KRTAP19-1Q8IUB9 90 aa12.46□□□□□ -0.41
TWIST1-201ENST00000242261 KRTAP9-3Q9BYQ3 159 aa12.31□□□□□ -0.44
TWIST1-201ENST00000242261 PLAC4Q8WY50 150 aa12.23□□□□□ -0.45
TWIST1-201ENST00000242261 CAMK2N1Q7Z7J9 78 aa12.22□□□□□ -0.45
TWIST1-201ENST00000242261 KRTAP19-8Q3LI54 63 aa12.19□□□□□ -0.46
TWIST1-201ENST00000242261 ROMO1P60602 79 aa12.16□□□□□ -0.46
TWIST1-201ENST00000242261 KTN1-AS1Q86SY8 53 aa12.13□□□□□ -0.47
TWIST1-201ENST00000242261 MT1BP07438 61 aa12□□□□□ -0.49
TWIST1-201ENST00000242261 C10orf95Q9H7T3 257 aa11.89□□□□□ -0.51
TWIST1-201ENST00000242261 PRAC1Q96KF2 57 aa11.81□□□□□ -0.52
TWIST1-201ENST00000242261 LOC100996750A0A140TA64 210 aa11.78□□□□□ -0.52
TWIST1-201ENST00000242261 KRTAP4-6Q9BYQ5 205 aa11.78□□□□□ -0.52
TWIST1-201ENST00000242261 KRTAP25-1Q3LHN0 102 aa11.65□□□□□ -0.54
TWIST1-201ENST00000242261 MT1XP80297 61 aa11.63□□□□□ -0.55
TWIST1-201ENST00000242261 PRO2289Q9P1D8 64 aa11.63□□□□□ -0.55
TWIST1-201ENST00000242261 KRTAP10-5P60370 271 aa11.62□□□□□ -0.55
TWIST1-201ENST00000242261 TNP1P09430 55 aa11.6□□□□□ -0.55
TWIST1-201ENST00000242261 USH2AO75445 5202 aa11.53□□□□□ -0.56
TWIST1-201ENST00000242261 PP632Q6XCG6 107 aa11.29□□□□□ -0.6
TWIST1-201ENST00000242261 KRTAP19-6Q3LI70 58 aa11.25□□□□□ -0.61
TWIST1-201ENST00000242261 KRTAP23-1A1A580 65 aa11.23□□□□□ -0.61
TWIST1-201ENST00000242261 SSPOA2VEC9 5147 aa11.17□□□□□ -0.62
TWIST1-201ENST00000242261 KRTAP10-7P60409 375 aaPredicted RBP11.16□□□□□ -0.62
TWIST1-201ENST00000242261 KRTAP10-12P60413 245 aa11.12□□□□□ -0.63
TWIST1-201ENST00000242261 KRTAP9-2Q9BYQ4 174 aa11.09□□□□□ -0.63
TWIST1-201ENST00000242261 LCE3AQ5TA76 89 aa11.04□□□□□ -0.64
TWIST1-201ENST00000242261 FSIP2Q5CZC0 6907 aa11.03□□□□□ -0.64
TWIST1-201ENST00000242261 KRTAP8-1Q8IUC2 63 aa10.81□□□□□ -0.68
TWIST1-201ENST00000242261 KRTAP4-8Q9BYQ9 185 aa10.76□□□□□ -0.69
TWIST1-201ENST00000242261 CRCT1Q9UGL9 99 aa10.73□□□□□ -0.69
TWIST1-201ENST00000242261 KRTAP4-8A0A0G2JLE6 195 aa10.69□□□□□ -0.7
TWIST1-201ENST00000242261 FCGBPQ9Y6R7 5405 aaPredicted RBP10.68□□□□□ -0.7
TWIST1-201ENST00000242261 KRTAP12-3P60328 96 aa10.63□□□□□ -0.71
TWIST1-201ENST00000242261 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.55□□□□□ -0.72
TWIST1-201ENST00000242261 KRTAP19-5Q3LI72 72 aa10.54□□□□□ -0.72
TWIST1-201ENST00000242261 KMT2DO14686 5537 aa10.52□□□□□ -0.73
TWIST1-201ENST00000242261 KRTAP9-6A0A140TA67 174 aa10.5□□□□□ -0.73
TWIST1-201ENST00000242261 KRTAP15-1Q3LI76 137 aa10.41□□□□□ -0.74
TWIST1-201ENST00000242261 KRTAP19-7Q3SYF9 63 aa10.36□□□□□ -0.75
TWIST1-201ENST00000242261 LCE3BQ5TA77 95 aa10.28□□□□□ -0.76
TWIST1-201ENST00000242261 KRTAP4-12Q9BQ66 201 aa10.23□□□□□ -0.77
TWIST1-201ENST00000242261 MACF1Q9UPN3 7388 aaKnown RBP10.21□□□□□ -0.78
TWIST1-201ENST00000242261 MT1EP04732 61 aa10.21□□□□□ -0.78
TWIST1-201ENST00000242261 H3BS24 57 aa10.18□□□□□ -0.78
TWIST1-201ENST00000242261 SPRR2FQ96RM1 72 aa10.04□□□□□ -0.8
TWIST1-201ENST00000242261 KRTAP9-9Q9BYP9 154 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 1251.6 ms