RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ACYP2P14621 99 aa5.84□□□□□ -1.47
TNFAIP3-201ENST00000237289 A8MU10 97 aa5.84□□□□□ -1.47
TNFAIP3-201ENST00000237289 Q5VV11 94 aa5.83□□□□□ -1.48
TNFAIP3-201ENST00000237289 TNXBP22105 4242 aa5.83□□□□□ -1.48
TNFAIP3-201ENST00000237289 CDC42SE1Q9NRR8 79 aa5.82□□□□□ -1.48
TNFAIP3-201ENST00000237289 H3BS24 57 aa5.81□□□□□ -1.48
TNFAIP3-201ENST00000237289 HRES1P13985 223 aa5.8□□□□□ -1.48
TNFAIP3-201ENST00000237289 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
TNFAIP3-201ENST00000237289 UQCR11O14957 56 aa5.76□□□□□ -1.49
TNFAIP3-201ENST00000237289 SPANXA2-OT1Q8N9U9 137 aa5.75□□□□□ -1.49
TNFAIP3-201ENST00000237289 H1FX-AS1Q4G0G2 97 aa5.72□□□□□ -1.49
TNFAIP3-201ENST00000237289 HERC1Q15751 4861 aa5.72□□□□□ -1.49
TNFAIP3-201ENST00000237289 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
TNFAIP3-201ENST00000237289 S4R3F8 94 aa5.7□□□□□ -1.5
TNFAIP3-201ENST00000237289 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
TNFAIP3-201ENST00000237289 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
TNFAIP3-201ENST00000237289 LRP2P98164 4655 aa5.65□□□□□ -1.5
TNFAIP3-201ENST00000237289 LINC01558Q9Y6Z2 57 aa5.65□□□□□ -1.5
TNFAIP3-201ENST00000237289 CRIPTQ9P021 101 aa5.63□□□□□ -1.51
TNFAIP3-201ENST00000237289 ADM2Q7Z4H4 148 aa5.62□□□□□ -1.51
TNFAIP3-201ENST00000237289 KRTAP4-1Q9BYQ7 146 aa5.61□□□□□ -1.51
TNFAIP3-201ENST00000237289 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
TNFAIP3-201ENST00000237289 LPAP08519 4548 aa5.6□□□□□ -1.51
TNFAIP3-201ENST00000237289 HMCN2Q8NDA2 5059 aa5.58□□□□□ -1.52
TNFAIP3-201ENST00000237289 A6NN06 94 aa5.56□□□□□ -1.52
TNFAIP3-201ENST00000237289 A0A0D9SG42 100 aa5.53□□□□□ -1.52
TNFAIP3-201ENST00000237289 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
TNFAIP3-201ENST00000237289 A0A1B0GU33 70 aa5.42□□□□□ -1.54
TNFAIP3-201ENST00000237289 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
TNFAIP3-201ENST00000237289 UBR4Q5T4S7 5183 aa5.4□□□□□ -1.54
TNFAIP3-201ENST00000237289 MT1HP80294 61 aa5.38□□□□□ -1.55
TNFAIP3-201ENST00000237289 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
TNFAIP3-201ENST00000237289 R4GN34 69 aa5.36□□□□□ -1.55
TNFAIP3-201ENST00000237289 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
TNFAIP3-201ENST00000237289 MUC17Q685J3 4493 aa5.34□□□□□ -1.56
TNFAIP3-201ENST00000237289 M0QZ58 72 aa5.3□□□□□ -1.56
TNFAIP3-201ENST00000237289 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
TNFAIP3-201ENST00000237289 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
TNFAIP3-201ENST00000237289 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
TNFAIP3-201ENST00000237289 MUC2Q02817 5179 aa5.24□□□□□ -1.57
TNFAIP3-201ENST00000237289 KRTAP25-1Q3LHN0 102 aa5.24□□□□□ -1.57
TNFAIP3-201ENST00000237289 KRTAP3-3Q9BYR6 98 aa5.24□□□□□ -1.57
TNFAIP3-201ENST00000237289 H0YAA0 97 aa5.22□□□□□ -1.57
TNFAIP3-201ENST00000237289 ROMO1P60602 79 aa5.22□□□□□ -1.57
TNFAIP3-201ENST00000237289 NDUFAF8A1L188 74 aa5.22□□□□□ -1.57
TNFAIP3-201ENST00000237289 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
TNFAIP3-201ENST00000237289 P0C880 135 aa5.18□□□□□ -1.58
TNFAIP3-201ENST00000237289 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
TNFAIP3-201ENST00000237289 LCE2AQ5TA79 106 aaPredicted RBP5.15□□□□□ -1.58
TNFAIP3-201ENST00000237289 LUZP6Q538Z0 58 aa5.15□□□□□ -1.58
TNFAIP3-201ENST00000237289 MT2AP02795 61 aa5.13□□□□□ -1.59
TNFAIP3-201ENST00000237289 LORP23490 312 aaPredicted RBP5.12□□□□□ -1.59
TNFAIP3-201ENST00000237289 CAMK2N1Q7Z7J9 78 aa5.12□□□□□ -1.59
TNFAIP3-201ENST00000237289 FLGP20930 4061 aaPredicted RBP5.09□□□□□ -1.59
TNFAIP3-201ENST00000237289 MT1FP04733 61 aa5.07□□□□□ -1.6
TNFAIP3-201ENST00000237289 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
TNFAIP3-201ENST00000237289 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
TNFAIP3-201ENST00000237289 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.61
TNFAIP3-201ENST00000237289 A0A0A0MQY5 61 aa5□□□□□ -1.61
TNFAIP3-201ENST00000237289 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
TNFAIP3-201ENST00000237289 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
TNFAIP3-201ENST00000237289 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
TNFAIP3-201ENST00000237289 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
TNFAIP3-201ENST00000237289 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
TNFAIP3-201ENST00000237289 LCE2DQ5TA82 110 aaPredicted RBP4.86□□□□□ -1.63
TNFAIP3-201ENST00000237289 KRTAP19-1Q8IUB9 90 aa4.85□□□□□ -1.63
TNFAIP3-201ENST00000237289 LCE2BO14633 110 aa4.79□□□□□ -1.64
TNFAIP3-201ENST00000237289 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
TNFAIP3-201ENST00000237289 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
TNFAIP3-201ENST00000237289 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
TNFAIP3-201ENST00000237289 CRCT1Q9UGL9 99 aa4.73□□□□□ -1.65
TNFAIP3-201ENST00000237289 TNP1P09430 55 aa4.72□□□□□ -1.65
TNFAIP3-201ENST00000237289 MT1BP07438 61 aa4.71□□□□□ -1.66
TNFAIP3-201ENST00000237289 FSIP2Q5CZC0 6907 aa4.7□□□□□ -1.66
TNFAIP3-201ENST00000237289 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
TNFAIP3-201ENST00000237289 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
TNFAIP3-201ENST00000237289 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
TNFAIP3-201ENST00000237289 MT1XP80297 61 aa4.53□□□□□ -1.68
TNFAIP3-201ENST00000237289 USH2AO75445 5202 aa4.52□□□□□ -1.69
TNFAIP3-201ENST00000237289 KRTAP15-1Q3LI76 137 aa4.49□□□□□ -1.69
TNFAIP3-201ENST00000237289 KRTAP10-12P60413 245 aa4.49□□□□□ -1.69
TNFAIP3-201ENST00000237289 KRTAP8-1Q8IUC2 63 aa4.45□□□□□ -1.7
TNFAIP3-201ENST00000237289 PP632Q6XCG6 107 aa4.42□□□□□ -1.7
TNFAIP3-201ENST00000237289 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
TNFAIP3-201ENST00000237289 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
TNFAIP3-201ENST00000237289 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
TNFAIP3-201ENST00000237289 SPRR2FQ96RM1 72 aa4.31□□□□□ -1.72
TNFAIP3-201ENST00000237289 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
TNFAIP3-201ENST00000237289 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
TNFAIP3-201ENST00000237289 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
TNFAIP3-201ENST00000237289 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
TNFAIP3-201ENST00000237289 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
TNFAIP3-201ENST00000237289 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
TNFAIP3-201ENST00000237289 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
TNFAIP3-201ENST00000237289 KRTAP19-5Q3LI72 72 aa4.18□□□□□ -1.74
TNFAIP3-201ENST00000237289 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
TNFAIP3-201ENST00000237289 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
TNFAIP3-201ENST00000237289 SPRR2EP22531 72 aa4.14□□□□□ -1.75
TNFAIP3-201ENST00000237289 SPRR2BP35325 72 aa4.14□□□□□ -1.75
TNFAIP3-201ENST00000237289 SPRR2AP35326 72 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms