RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 A0A087WVE0 104 aa5.57□□□□□ -1.52
SF3B6-201ENST00000233468 H1FX-AS1Q4G0G2 97 aa5.57□□□□□ -1.52
SF3B6-201ENST00000233468 LOC101927531A0A1B0GV80 90 aa5.56□□□□□ -1.52
SF3B6-201ENST00000233468 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
SF3B6-201ENST00000233468 C4orf26Q17RF5 130 aa5.53□□□□□ -1.52
SF3B6-201ENST00000233468 IMUPQ9GZP8 106 aa5.53□□□□□ -1.52
SF3B6-201ENST00000233468 H0Y9P7 68 aa5.52□□□□□ -1.53
SF3B6-201ENST00000233468 CYP4F30PQ9H0H9 118 aa5.52□□□□□ -1.53
SF3B6-201ENST00000233468 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
SF3B6-201ENST00000233468 MP68P56378 58 aa5.51□□□□□ -1.53
SF3B6-201ENST00000233468 USH2AO75445 5202 aa5.51□□□□□ -1.53
SF3B6-201ENST00000233468 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
SF3B6-201ENST00000233468 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
SF3B6-201ENST00000233468 OCR1Q9BZK8 76 aa5.47□□□□□ -1.53
SF3B6-201ENST00000233468 H3BPC8 53 aa5.45□□□□□ -1.54
SF3B6-201ENST00000233468 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
SF3B6-201ENST00000233468 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
SF3B6-201ENST00000233468 MT-ATP8P03928 68 aa5.43□□□□□ -1.54
SF3B6-201ENST00000233468 S4R3F8 94 aa5.43□□□□□ -1.54
SF3B6-201ENST00000233468 FCGBPQ9Y6R7 5405 aaPredicted RBP5.43□□□□□ -1.54
SF3B6-201ENST00000233468 MT2AP02795 61 aa5.41□□□□□ -1.54
SF3B6-201ENST00000233468 KRTAP10-10P60014 251 aa5.4□□□□□ -1.54
SF3B6-201ENST00000233468 A8MUN3 132 aa5.39□□□□□ -1.55
SF3B6-201ENST00000233468 CSAG1Q6PB30 78 aa5.39□□□□□ -1.55
SF3B6-201ENST00000233468 FAM236AA0A1B0GUQ0 79 aa5.38□□□□□ -1.55
SF3B6-201ENST00000233468 FAM236BA0A1B0GV22 79 aa5.38□□□□□ -1.55
SF3B6-201ENST00000233468 MT1FP04733 61 aa5.38□□□□□ -1.55
SF3B6-201ENST00000233468 TRAV7A0A075B6U4 112 aa5.36□□□□□ -1.55
SF3B6-201ENST00000233468 LCA10Q71F78 164 aa5.35□□□□□ -1.55
SF3B6-201ENST00000233468 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
SF3B6-201ENST00000233468 NDUFC1O43677 76 aa5.31□□□□□ -1.56
SF3B6-201ENST00000233468 SERP2Q8N6R1 65 aa5.25□□□□□ -1.57
SF3B6-201ENST00000233468 DMAC1Q96GE9 116 aa5.24□□□□□ -1.57
SF3B6-201ENST00000233468 MACF1Q9UPN3 7388 aaKnown RBP5.24□□□□□ -1.57
SF3B6-201ENST00000233468 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.57
SF3B6-201ENST00000233468 ACYP2P14621 99 aa5.2□□□□□ -1.58
SF3B6-201ENST00000233468 KRTAP19-6Q3LI70 58 aa5.2□□□□□ -1.58
SF3B6-201ENST00000233468 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
SF3B6-201ENST00000233468 SNURFQ9Y675 71 aa5.19□□□□□ -1.58
SF3B6-201ENST00000233468 H0YAA0 97 aa5.18□□□□□ -1.58
SF3B6-201ENST00000233468 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
SF3B6-201ENST00000233468 CRIPTQ9P021 101 aa5.17□□□□□ -1.58
SF3B6-201ENST00000233468 SPTSSBQ8NFR3 76 aa5.16□□□□□ -1.58
SF3B6-201ENST00000233468 SPANXA2-OT1Q8N9U9 137 aa5.15□□□□□ -1.59
SF3B6-201ENST00000233468 CHKB-CPT1BH3BT56 60 aa5.13□□□□□ -1.59
SF3B6-201ENST00000233468 COX7CP15954 63 aa5.13□□□□□ -1.59
SF3B6-201ENST00000233468 ADM2Q7Z4H4 148 aa5.1□□□□□ -1.59
SF3B6-201ENST00000233468 KRTAP6-3Q3LI67 103 aa5.09□□□□□ -1.59
SF3B6-201ENST00000233468 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.59
SF3B6-201ENST00000233468 ANAPC13Q9BS18 74 aa5.06□□□□□ -1.6
SF3B6-201ENST00000233468 Q5VV11 94 aa5.05□□□□□ -1.6
SF3B6-201ENST00000233468 KRTAP19-8Q3LI54 63 aa5.02□□□□□ -1.61
SF3B6-201ENST00000233468 R4GN34 69 aa5.01□□□□□ -1.61
SF3B6-201ENST00000233468 H7BZZ5 65 aa4.98□□□□□ -1.61
SF3B6-201ENST00000233468 P0C880 135 aa4.96□□□□□ -1.62
SF3B6-201ENST00000233468 COA5Q86WW8 74 aa4.96□□□□□ -1.62
SF3B6-201ENST00000233468 M0QZ58 72 aa4.95□□□□□ -1.62
SF3B6-201ENST00000233468 MT1BP07438 61 aa4.95□□□□□ -1.62
SF3B6-201ENST00000233468 A6NN06 94 aa4.91□□□□□ -1.62
SF3B6-201ENST00000233468 SEC61GP60059 68 aa4.91□□□□□ -1.62
SF3B6-201ENST00000233468 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
SF3B6-201ENST00000233468 CYSTM1Q9H1C7 97 aa4.91□□□□□ -1.62
SF3B6-201ENST00000233468 CCDC179H3BU77 68 aa4.89□□□□□ -1.63
SF3B6-201ENST00000233468 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
SF3B6-201ENST00000233468 MUC12Q9UKN1 5478 aa4.88□□□□□ -1.63
SF3B6-201ENST00000233468 SERP1Q9Y6X1 66 aa4.88□□□□□ -1.63
SF3B6-201ENST00000233468 NEBP20929 6669 aa4.87□□□□□ -1.63
SF3B6-201ENST00000233468 PCP4P48539 62 aa4.86□□□□□ -1.63
SF3B6-201ENST00000233468 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
SF3B6-201ENST00000233468 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
SF3B6-201ENST00000233468 KRTAP10-5P60370 271 aa4.84□□□□□ -1.63
SF3B6-201ENST00000233468 PRO2289Q9P1D8 64 aa4.84□□□□□ -1.63
SF3B6-201ENST00000233468 KRTAP20-1Q3LI63 56 aa4.83□□□□□ -1.64
SF3B6-201ENST00000233468 TMEM258P61165 79 aa4.79□□□□□ -1.64
SF3B6-201ENST00000233468 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
SF3B6-201ENST00000233468 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
SF3B6-201ENST00000233468 A0A1B0GU69 56 aa4.75□□□□□ -1.65
SF3B6-201ENST00000233468 KMT2DO14686 5537 aa4.74□□□□□ -1.65
SF3B6-201ENST00000233468 A0A0A0MQY5 61 aa4.74□□□□□ -1.65
SF3B6-201ENST00000233468 A0A1B0GU33 70 aa4.73□□□□□ -1.65
SF3B6-201ENST00000233468 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
SF3B6-201ENST00000233468 MDN1Q9NU22 5596 aa4.71□□□□□ -1.65
SF3B6-201ENST00000233468 MT1XP80297 61 aa4.7□□□□□ -1.66
SF3B6-201ENST00000233468 MT3P25713 68 aa4.69□□□□□ -1.66
SF3B6-201ENST00000233468 KRTAP10-7P60409 375 aaPredicted RBP4.69□□□□□ -1.66
SF3B6-201ENST00000233468 KRTAP13-4Q3LI77 160 aa4.68□□□□□ -1.66
SF3B6-201ENST00000233468 CAMK2N1Q7Z7J9 78 aa4.65□□□□□ -1.67
SF3B6-201ENST00000233468 SMIM26A0A096LP01 95 aa4.64□□□□□ -1.67
SF3B6-201ENST00000233468 KRTAP2-3P0C7H8 128 aa4.64□□□□□ -1.67
SF3B6-201ENST00000233468 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
SF3B6-201ENST00000233468 KRTAP2-4Q9BYR9 128 aa4.64□□□□□ -1.67
SF3B6-201ENST00000233468 A0A0D9SG42 100 aa4.63□□□□□ -1.67
SF3B6-201ENST00000233468 LINC01558Q9Y6Z2 57 aa4.63□□□□□ -1.67
SF3B6-201ENST00000233468 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
SF3B6-201ENST00000233468 SPINT4Q6UDR6 99 aa4.59□□□□□ -1.67
SF3B6-201ENST00000233468 SPRR2FQ96RM1 72 aa4.59□□□□□ -1.67
SF3B6-201ENST00000233468 SPRR2EP22531 72 aa4.57□□□□□ -1.68
SF3B6-201ENST00000233468 SPRR2BP35325 72 aa4.57□□□□□ -1.68
SF3B6-201ENST00000233468 SPRR2AP35326 72 aa4.57□□□□□ -1.68
SF3B6-201ENST00000233468 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms