RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 XP32Q5T750 250 aa7.62□□□□□ -1.19
PRKAB1-201ENST00000229328 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
PRKAB1-201ENST00000229328 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
PRKAB1-201ENST00000229328 ABCA13Q86UQ4 5058 aa7.57□□□□□ -1.2
PRKAB1-201ENST00000229328 LPAP08519 4548 aa7.5□□□□□ -1.21
PRKAB1-201ENST00000229328 LRP2P98164 4655 aa7.49□□□□□ -1.21
PRKAB1-201ENST00000229328 A0A1B0GU69 56 aa7.49□□□□□ -1.21
PRKAB1-201ENST00000229328 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
PRKAB1-201ENST00000229328 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
PRKAB1-201ENST00000229328 CSAG1Q6PB30 78 aa7.47□□□□□ -1.21
PRKAB1-201ENST00000229328 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
PRKAB1-201ENST00000229328 HERC2O95714 4834 aa7.44□□□□□ -1.22
PRKAB1-201ENST00000229328 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
PRKAB1-201ENST00000229328 BIRC6Q9NR09 4857 aa7.41□□□□□ -1.22
PRKAB1-201ENST00000229328 UQCR11O14957 56 aa7.4□□□□□ -1.23
PRKAB1-201ENST00000229328 J3QL48 77 aa7.33□□□□□ -1.24
PRKAB1-201ENST00000229328 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
PRKAB1-201ENST00000229328 S4R3F8 94 aa7.24□□□□□ -1.25
PRKAB1-201ENST00000229328 PCLOQ9Y6V0 5065 aa7.23□□□□□ -1.25
PRKAB1-201ENST00000229328 H1FX-AS1Q4G0G2 97 aa7.21□□□□□ -1.25
PRKAB1-201ENST00000229328 ROMO1P60602 79 aa7.21□□□□□ -1.26
PRKAB1-201ENST00000229328 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
PRKAB1-201ENST00000229328 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
PRKAB1-201ENST00000229328 A0A1B0GU33 70 aa7.18□□□□□ -1.26
PRKAB1-201ENST00000229328 H0YAA0 97 aa7.17□□□□□ -1.26
PRKAB1-201ENST00000229328 SEC61BP60468 96 aaKnown RBP7.15□□□□□ -1.26
PRKAB1-201ENST00000229328 KRTAP4-1Q9BYQ7 146 aa7.14□□□□□ -1.27
PRKAB1-201ENST00000229328 HERC1Q15751 4861 aa7.14□□□□□ -1.27
PRKAB1-201ENST00000229328 KRTAP10-6P60371 365 aaPredicted RBP7.13□□□□□ -1.27
PRKAB1-201ENST00000229328 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
PRKAB1-201ENST00000229328 P0C880 135 aa7.05□□□□□ -1.28
PRKAB1-201ENST00000229328 MUC2Q02817 5179 aa7.03□□□□□ -1.28
PRKAB1-201ENST00000229328 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
PRKAB1-201ENST00000229328 HMCN2Q8NDA2 5059 aa7.02□□□□□ -1.29
PRKAB1-201ENST00000229328 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
PRKAB1-201ENST00000229328 CRIPTQ9P021 101 aa6.96□□□□□ -1.3
PRKAB1-201ENST00000229328 A0A0D9SG42 100 aa6.91□□□□□ -1.3
PRKAB1-201ENST00000229328 K7ERS5 55 aa6.84□□□□□ -1.31
PRKAB1-201ENST00000229328 FLGP20930 4061 aaPredicted RBP6.82□□□□□ -1.32
PRKAB1-201ENST00000229328 SPINT4Q6UDR6 99 aa6.8□□□□□ -1.32
PRKAB1-201ENST00000229328 M0QZ58 72 aa6.76□□□□□ -1.33
PRKAB1-201ENST00000229328 UBR4Q5T4S7 5183 aa6.76□□□□□ -1.33
PRKAB1-201ENST00000229328 LORP23490 312 aaPredicted RBP6.76□□□□□ -1.33
PRKAB1-201ENST00000229328 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
PRKAB1-201ENST00000229328 NDUFAF8A1L188 74 aa6.75□□□□□ -1.33
PRKAB1-201ENST00000229328 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
PRKAB1-201ENST00000229328 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
PRKAB1-201ENST00000229328 FAT4Q6V0I7 4981 aa6.71□□□□□ -1.34
PRKAB1-201ENST00000229328 R4GN34 69 aa6.69□□□□□ -1.34
PRKAB1-201ENST00000229328 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
PRKAB1-201ENST00000229328 KRTAP15-1Q3LI76 137 aa6.67□□□□□ -1.34
PRKAB1-201ENST00000229328 A0A0A0MQY5 61 aa6.61□□□□□ -1.35
PRKAB1-201ENST00000229328 C10orf95Q9H7T3 257 aa6.61□□□□□ -1.35
PRKAB1-201ENST00000229328 MT1HP80294 61 aa6.5□□□□□ -1.37
PRKAB1-201ENST00000229328 M0R2T5 61 aa6.46□□□□□ -1.38
PRKAB1-201ENST00000229328 LUZP6Q538Z0 58 aa6.33□□□□□ -1.4
PRKAB1-201ENST00000229328 MT2AP02795 61 aa6.32□□□□□ -1.4
PRKAB1-201ENST00000229328 MT1FP04733 61 aa6.32□□□□□ -1.4
PRKAB1-201ENST00000229328 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
PRKAB1-201ENST00000229328 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
PRKAB1-201ENST00000229328 CAMK2N1Q7Z7J9 78 aa6.31□□□□□ -1.4
PRKAB1-201ENST00000229328 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
PRKAB1-201ENST00000229328 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
PRKAB1-201ENST00000229328 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
PRKAB1-201ENST00000229328 KRTAP19-8Q3LI54 63 aa6.08□□□□□ -1.44
PRKAB1-201ENST00000229328 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
PRKAB1-201ENST00000229328 MT1BP07438 61 aa6.04□□□□□ -1.44
PRKAB1-201ENST00000229328 TNP1P09430 55 aa6.03□□□□□ -1.44
PRKAB1-201ENST00000229328 LCE2AQ5TA79 106 aaPredicted RBP6.01□□□□□ -1.45
PRKAB1-201ENST00000229328 PP632Q6XCG6 107 aa5.96□□□□□ -1.46
PRKAB1-201ENST00000229328 KRTAP10-5P60370 271 aa5.91□□□□□ -1.46
PRKAB1-201ENST00000229328 MT1XP80297 61 aa5.91□□□□□ -1.46
PRKAB1-201ENST00000229328 LCE2BO14633 110 aa5.89□□□□□ -1.47
PRKAB1-201ENST00000229328 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
PRKAB1-201ENST00000229328 USH2AO75445 5202 aa5.85□□□□□ -1.47
PRKAB1-201ENST00000229328 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
PRKAB1-201ENST00000229328 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
PRKAB1-201ENST00000229328 PRO2289Q9P1D8 64 aa5.69□□□□□ -1.5
PRKAB1-201ENST00000229328 KRTAP10-12P60413 245 aa5.67□□□□□ -1.5
PRKAB1-201ENST00000229328 FSIP2Q5CZC0 6907 aa5.64□□□□□ -1.51
PRKAB1-201ENST00000229328 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
PRKAB1-201ENST00000229328 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
PRKAB1-201ENST00000229328 LCE2DQ5TA82 110 aaPredicted RBP5.57□□□□□ -1.52
PRKAB1-201ENST00000229328 KMT2DO14686 5537 aa5.56□□□□□ -1.52
PRKAB1-201ENST00000229328 KRTAP12-3P60328 96 aa5.52□□□□□ -1.53
PRKAB1-201ENST00000229328 SSPOA2VEC9 5147 aa5.52□□□□□ -1.53
PRKAB1-201ENST00000229328 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
PRKAB1-201ENST00000229328 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
PRKAB1-201ENST00000229328 KRTAP19-5Q3LI72 72 aa5.42□□□□□ -1.54
PRKAB1-201ENST00000229328 INE1O15225 51 aa5.36□□□□□ -1.55
PRKAB1-201ENST00000229328 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
PRKAB1-201ENST00000229328 KRTAP19-7Q3SYF9 63 aa5.27□□□□□ -1.57
PRKAB1-201ENST00000229328 FCGBPQ9Y6R7 5405 aaPredicted RBP5.21□□□□□ -1.57
PRKAB1-201ENST00000229328 LCE3CQ5T5A8 94 aa5.18□□□□□ -1.58
PRKAB1-201ENST00000229328 MT1EP04732 61 aa5.14□□□□□ -1.59
PRKAB1-201ENST00000229328 KRTAP9-2Q9BYQ4 174 aa5.1□□□□□ -1.59
PRKAB1-201ENST00000229328 MT1LQ93083 61 aa5.09□□□□□ -1.6
PRKAB1-201ENST00000229328 KRTAP4-7Q9BYR0 210 aa5.08□□□□□ -1.6
PRKAB1-201ENST00000229328 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
PRKAB1-201ENST00000229328 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms