RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 LINC01554Q52M75 96 aa7.16□□□□□ -1.26
USP5-201ENST00000229268 LPAP08519 4548 aa7.16□□□□□ -1.26
USP5-201ENST00000229268 LRP2P98164 4655 aa7.14□□□□□ -1.27
USP5-201ENST00000229268 J3QL48 77 aa7.14□□□□□ -1.27
USP5-201ENST00000229268 XP32Q5T750 250 aa7.12□□□□□ -1.27
USP5-201ENST00000229268 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
USP5-201ENST00000229268 CSAG1Q6PB30 78 aa7.09□□□□□ -1.27
USP5-201ENST00000229268 A0A1B0GU69 56 aa7.08□□□□□ -1.28
USP5-201ENST00000229268 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
USP5-201ENST00000229268 BIRC6Q9NR09 4857 aa7.03□□□□□ -1.28
USP5-201ENST00000229268 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
USP5-201ENST00000229268 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
USP5-201ENST00000229268 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
USP5-201ENST00000229268 PCLOQ9Y6V0 5065 aa6.97□□□□□ -1.29
USP5-201ENST00000229268 HERC1Q15751 4861 aa6.96□□□□□ -1.3
USP5-201ENST00000229268 UQCR11O14957 56 aa6.95□□□□□ -1.3
USP5-201ENST00000229268 COX6B2Q6YFQ2 88 aa6.91□□□□□ -1.3
USP5-201ENST00000229268 MUC2Q02817 5179 aa6.9□□□□□ -1.3
USP5-201ENST00000229268 TPRXLQ17RH7 258 aa6.9□□□□□ -1.3
USP5-201ENST00000229268 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
USP5-201ENST00000229268 S4R3F8 94 aa6.75□□□□□ -1.33
USP5-201ENST00000229268 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
USP5-201ENST00000229268 ROMO1P60602 79 aa6.73□□□□□ -1.33
USP5-201ENST00000229268 H0YAA0 97 aa6.72□□□□□ -1.33
USP5-201ENST00000229268 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
USP5-201ENST00000229268 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
USP5-201ENST00000229268 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
USP5-201ENST00000229268 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
USP5-201ENST00000229268 RNF213Q63HN8 5207 aa6.66□□□□□ -1.34
USP5-201ENST00000229268 P0C880 135 aa6.64□□□□□ -1.35
USP5-201ENST00000229268 A0A1B0GU33 70 aa6.63□□□□□ -1.35
USP5-201ENST00000229268 HMCN2Q8NDA2 5059 aa6.63□□□□□ -1.35
USP5-201ENST00000229268 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
USP5-201ENST00000229268 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
USP5-201ENST00000229268 A0A0D9SG42 100 aa6.57□□□□□ -1.36
USP5-201ENST00000229268 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
USP5-201ENST00000229268 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
USP5-201ENST00000229268 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
USP5-201ENST00000229268 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
USP5-201ENST00000229268 SPINT4Q6UDR6 99 aa6.45□□□□□ -1.38
USP5-201ENST00000229268 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
USP5-201ENST00000229268 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
USP5-201ENST00000229268 K7ERS5 55 aa6.38□□□□□ -1.39
USP5-201ENST00000229268 KRTAP19-2Q3LHN2 52 aa6.35□□□□□ -1.39
USP5-201ENST00000229268 A0A0A0MQY5 61 aa6.34□□□□□ -1.39
USP5-201ENST00000229268 M0QZ58 72 aa6.34□□□□□ -1.4
USP5-201ENST00000229268 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.4
USP5-201ENST00000229268 M0R2T5 61 aa6.33□□□□□ -1.4
USP5-201ENST00000229268 R4GN34 69 aa6.32□□□□□ -1.4
USP5-201ENST00000229268 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
USP5-201ENST00000229268 KRTAP12-2P59991 146 aa6.24□□□□□ -1.41
USP5-201ENST00000229268 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
USP5-201ENST00000229268 LCE2CQ5TA81 110 aa6.2□□□□□ -1.42
USP5-201ENST00000229268 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
USP5-201ENST00000229268 MT1HP80294 61 aa6.11□□□□□ -1.43
USP5-201ENST00000229268 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
USP5-201ENST00000229268 CAMK2N1Q7Z7J9 78 aa6□□□□□ -1.45
USP5-201ENST00000229268 MT1FP04733 61 aa5.93□□□□□ -1.46
USP5-201ENST00000229268 MT2AP02795 61 aa5.92□□□□□ -1.46
USP5-201ENST00000229268 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
USP5-201ENST00000229268 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
USP5-201ENST00000229268 LUZP6Q538Z0 58 aa5.84□□□□□ -1.47
USP5-201ENST00000229268 PLAC4Q8WY50 150 aa5.81□□□□□ -1.48
USP5-201ENST00000229268 USH2AO75445 5202 aa5.8□□□□□ -1.48
USP5-201ENST00000229268 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
USP5-201ENST00000229268 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
USP5-201ENST00000229268 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
USP5-201ENST00000229268 LCE2AQ5TA79 106 aaPredicted RBP5.61□□□□□ -1.51
USP5-201ENST00000229268 TNP1P09430 55 aa5.6□□□□□ -1.51
USP5-201ENST00000229268 MT1BP07438 61 aa5.59□□□□□ -1.51
USP5-201ENST00000229268 LCE2BO14633 110 aa5.55□□□□□ -1.52
USP5-201ENST00000229268 KRTAP19-8Q3LI54 63 aa5.54□□□□□ -1.52
USP5-201ENST00000229268 KMT2DO14686 5537 aa5.47□□□□□ -1.53
USP5-201ENST00000229268 MT1XP80297 61 aa5.47□□□□□ -1.53
USP5-201ENST00000229268 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
USP5-201ENST00000229268 LCE3AQ5TA76 89 aa5.4□□□□□ -1.55
USP5-201ENST00000229268 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
USP5-201ENST00000229268 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
USP5-201ENST00000229268 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.56
USP5-201ENST00000229268 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
USP5-201ENST00000229268 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
USP5-201ENST00000229268 KRTAP4-8A0A0G2JLE6 195 aa5.22□□□□□ -1.57
USP5-201ENST00000229268 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
USP5-201ENST00000229268 SPRR5A0A1B0GTR4 108 aa5.14□□□□□ -1.59
USP5-201ENST00000229268 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
USP5-201ENST00000229268 KRTAP12-3P60328 96 aa5.13□□□□□ -1.59
USP5-201ENST00000229268 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
USP5-201ENST00000229268 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
USP5-201ENST00000229268 FCGBPQ9Y6R7 5405 aaPredicted RBP5.05□□□□□ -1.6
USP5-201ENST00000229268 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
USP5-201ENST00000229268 MUC12Q9UKN1 5478 aa4.96□□□□□ -1.62
USP5-201ENST00000229268 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
USP5-201ENST00000229268 MACF1Q9UPN3 7388 aaKnown RBP4.89□□□□□ -1.63
USP5-201ENST00000229268 KRTAP19-7Q3SYF9 63 aa4.87□□□□□ -1.63
USP5-201ENST00000229268 KRTAP9-2Q9BYQ4 174 aa4.87□□□□□ -1.63
USP5-201ENST00000229268 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
USP5-201ENST00000229268 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
USP5-201ENST00000229268 DSTQ03001 7570 aaKnown RBP4.82□□□□□ -1.64
USP5-201ENST00000229268 INE1O15225 51 aa4.8□□□□□ -1.64
USP5-201ENST00000229268 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms