RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 RPL37P61927 97 aaKnown RBP8.92□□□□□ -0.98
GAPDH-201ENST00000229239 SEC61GP60059 68 aa8.89□□□□□ -0.99
GAPDH-201ENST00000229239 COX6B2Q6YFQ2 88 aa8.89□□□□□ -0.99
GAPDH-201ENST00000229239 A8MU10 97 aa8.87□□□□□ -0.99
GAPDH-201ENST00000229239 KRTAP3-1Q9BYR8 98 aa8.87□□□□□ -0.99
GAPDH-201ENST00000229239 UQCR11O14957 56 aa8.86□□□□□ -0.99
GAPDH-201ENST00000229239 PMAIP1Q13794 54 aa8.86□□□□□ -0.99
GAPDH-201ENST00000229239 XP32Q5T750 250 aa8.86□□□□□ -0.99
GAPDH-201ENST00000229239 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
GAPDH-201ENST00000229239 MIR22HGQ0VDD5 57 aa8.77□□□□□ -1.01
GAPDH-201ENST00000229239 LPAP08519 4548 aa8.76□□□□□ -1.01
GAPDH-201ENST00000229239 RNF213Q63HN8 5207 aa8.76□□□□□ -1.01
GAPDH-201ENST00000229239 TPRXLQ17RH7 258 aa8.74□□□□□ -1.01
GAPDH-201ENST00000229239 A6NN06 94 aa8.72□□□□□ -1.01
GAPDH-201ENST00000229239 KTN1-AS1Q86SY8 53 aa8.65□□□□□ -1.02
GAPDH-201ENST00000229239 A0A1B0GU33 70 aa8.6□□□□□ -1.03
GAPDH-201ENST00000229239 H1FX-AS1Q4G0G2 97 aa8.57□□□□□ -1.04
GAPDH-201ENST00000229239 S4R3F8 94 aa8.57□□□□□ -1.04
GAPDH-201ENST00000229239 KRTAP3-3Q9BYR6 98 aa8.53□□□□□ -1.04
GAPDH-201ENST00000229239 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.05
GAPDH-201ENST00000229239 MUC2Q02817 5179 aa8.51□□□□□ -1.05
GAPDH-201ENST00000229239 H0YAA0 97 aa8.49□□□□□ -1.05
GAPDH-201ENST00000229239 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
GAPDH-201ENST00000229239 MUC17Q685J3 4493 aa8.41□□□□□ -1.06
GAPDH-201ENST00000229239 KRTAP10-6P60371 365 aaPredicted RBP8.38□□□□□ -1.07
GAPDH-201ENST00000229239 K7ERS5 55 aa8.37□□□□□ -1.07
GAPDH-201ENST00000229239 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
GAPDH-201ENST00000229239 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
GAPDH-201ENST00000229239 FAT4Q6V0I7 4981 aa8.29□□□□□ -1.08
GAPDH-201ENST00000229239 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
GAPDH-201ENST00000229239 P0C880 135 aa8.21□□□□□ -1.1
GAPDH-201ENST00000229239 LCE2AQ5TA79 106 aaPredicted RBP8.21□□□□□ -1.1
GAPDH-201ENST00000229239 KRTAP13-4Q3LI77 160 aa8.18□□□□□ -1.1
GAPDH-201ENST00000229239 M0QZ58 72 aa8.17□□□□□ -1.1
GAPDH-201ENST00000229239 KRTAP4-1Q9BYQ7 146 aa8.17□□□□□ -1.1
GAPDH-201ENST00000229239 PRAC1Q96KF2 57 aa8.15□□□□□ -1.11
GAPDH-201ENST00000229239 A0A0D9SG42 100 aa8.08□□□□□ -1.12
GAPDH-201ENST00000229239 ROMO1P60602 79 aa8.03□□□□□ -1.12
GAPDH-201ENST00000229239 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.12
GAPDH-201ENST00000229239 KRTAP9-2Q9BYQ4 174 aa7.98□□□□□ -1.13
GAPDH-201ENST00000229239 LINC01554Q52M75 96 aa7.95□□□□□ -1.14
GAPDH-201ENST00000229239 LCE2CQ5TA81 110 aa7.95□□□□□ -1.14
GAPDH-201ENST00000229239 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
GAPDH-201ENST00000229239 R4GN34 69 aa7.94□□□□□ -1.14
GAPDH-201ENST00000229239 KRTAP12-1P59990 96 aa7.93□□□□□ -1.14
GAPDH-201ENST00000229239 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
GAPDH-201ENST00000229239 SPINT4Q6UDR6 99 aa7.89□□□□□ -1.15
GAPDH-201ENST00000229239 MT1HP80294 61 aa7.85□□□□□ -1.15
GAPDH-201ENST00000229239 FLGP20930 4061 aaPredicted RBP7.77□□□□□ -1.17
GAPDH-201ENST00000229239 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
GAPDH-201ENST00000229239 LCE2DQ5TA82 110 aaPredicted RBP7.75□□□□□ -1.17
GAPDH-201ENST00000229239 M0R2T5 61 aa7.74□□□□□ -1.17
GAPDH-201ENST00000229239 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
GAPDH-201ENST00000229239 KRTAP9-6A0A140TA67 174 aa7.71□□□□□ -1.18
GAPDH-201ENST00000229239 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
GAPDH-201ENST00000229239 CRCT1Q9UGL9 99 aa7.53□□□□□ -1.2
GAPDH-201ENST00000229239 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
GAPDH-201ENST00000229239 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
GAPDH-201ENST00000229239 KRTAP9-8Q9BYQ0 159 aa7.45□□□□□ -1.22
GAPDH-201ENST00000229239 SPRR2GQ9BYE4 73 aa7.41□□□□□ -1.22
GAPDH-201ENST00000229239 H3BS24 57 aa7.39□□□□□ -1.23
GAPDH-201ENST00000229239 PP632Q6XCG6 107 aa7.36□□□□□ -1.23
GAPDH-201ENST00000229239 MT2AP02795 61 aa7.34□□□□□ -1.23
GAPDH-201ENST00000229239 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
GAPDH-201ENST00000229239 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
GAPDH-201ENST00000229239 MT1FP04733 61 aa7.28□□□□□ -1.24
GAPDH-201ENST00000229239 USH2AO75445 5202 aa7.27□□□□□ -1.25
GAPDH-201ENST00000229239 KRTAP10-10P60014 251 aa7.27□□□□□ -1.25
GAPDH-201ENST00000229239 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
GAPDH-201ENST00000229239 TNP1P09430 55 aa7.24□□□□□ -1.25
GAPDH-201ENST00000229239 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
GAPDH-201ENST00000229239 KRTAP9-3Q9BYQ3 159 aa7.2□□□□□ -1.26
GAPDH-201ENST00000229239 LCE2BO14633 110 aa7.15□□□□□ -1.26
GAPDH-201ENST00000229239 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
GAPDH-201ENST00000229239 KRTAP19-8Q3LI54 63 aa7.13□□□□□ -1.27
GAPDH-201ENST00000229239 FCGBPQ9Y6R7 5405 aaPredicted RBP7.04□□□□□ -1.28
GAPDH-201ENST00000229239 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.02□□□□□ -1.28
GAPDH-201ENST00000229239 MT1BP07438 61 aa6.96□□□□□ -1.29
GAPDH-201ENST00000229239 KRTAP9-7A8MTY7 169 aa6.94□□□□□ -1.3
GAPDH-201ENST00000229239 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
GAPDH-201ENST00000229239 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
GAPDH-201ENST00000229239 MT1XP80297 61 aa6.85□□□□□ -1.31
GAPDH-201ENST00000229239 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
GAPDH-201ENST00000229239 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
GAPDH-201ENST00000229239 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
GAPDH-201ENST00000229239 LCE3AQ5TA76 89 aa6.76□□□□□ -1.33
GAPDH-201ENST00000229239 A0A0A0MQY5 61 aa6.75□□□□□ -1.33
GAPDH-201ENST00000229239 KRTAP8-1Q8IUC2 63 aa6.71□□□□□ -1.34
GAPDH-201ENST00000229239 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
GAPDH-201ENST00000229239 SYNE2Q8WXH0 6885 aaKnown RBP6.69□□□□□ -1.34
GAPDH-201ENST00000229239 KRTAP10-12P60413 245 aa6.66□□□□□ -1.34
GAPDH-201ENST00000229239 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
GAPDH-201ENST00000229239 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
GAPDH-201ENST00000229239 KRTAP6-3Q3LI67 103 aa6.56□□□□□ -1.36
GAPDH-201ENST00000229239 KRTAP12-3P60328 96 aa6.51□□□□□ -1.37
GAPDH-201ENST00000229239 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
GAPDH-201ENST00000229239 NEBP20929 6669 aa6.31□□□□□ -1.4
GAPDH-201ENST00000229239 KRTAP19-5Q3LI72 72 aa6.28□□□□□ -1.4
GAPDH-201ENST00000229239 KRTAP5-9P26371 169 aa6.28□□□□□ -1.4
GAPDH-201ENST00000229239 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms