RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
GPN3-201ENST00000228827 S4R3F8 94 aa6.59□□□□□ -1.36
GPN3-201ENST00000228827 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
GPN3-201ENST00000228827 FAM236AA0A1B0GUQ0 79 aa6.54□□□□□ -1.36
GPN3-201ENST00000228827 FAM236BA0A1B0GV22 79 aa6.54□□□□□ -1.36
GPN3-201ENST00000228827 IMUPQ9GZP8 106 aa6.54□□□□□ -1.36
GPN3-201ENST00000228827 HIST1H4AP62805 103 aaKnown RBP6.53□□□□□ -1.36
GPN3-201ENST00000228827 LCA10Q71F78 164 aa6.53□□□□□ -1.36
GPN3-201ENST00000228827 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
GPN3-201ENST00000228827 CYP4F30PQ9H0H9 118 aa6.49□□□□□ -1.37
GPN3-201ENST00000228827 MACF1Q9UPN3 7388 aaKnown RBP6.47□□□□□ -1.37
GPN3-201ENST00000228827 TRAV22A0A0B4J277 110 aa6.47□□□□□ -1.37
GPN3-201ENST00000228827 A0A087WVE0 104 aa6.46□□□□□ -1.38
GPN3-201ENST00000228827 LOC101927531A0A1B0GV80 90 aa6.44□□□□□ -1.38
GPN3-201ENST00000228827 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
GPN3-201ENST00000228827 SCGB1A1P11684 91 aa6.41□□□□□ -1.38
GPN3-201ENST00000228827 UQCRQO14949 82 aa6.4□□□□□ -1.39
GPN3-201ENST00000228827 H0Y9P7 68 aa6.39□□□□□ -1.39
GPN3-201ENST00000228827 MT1BP07438 61 aa6.38□□□□□ -1.39
GPN3-201ENST00000228827 KLKP1Q107X0 134 aa6.38□□□□□ -1.39
GPN3-201ENST00000228827 Q5VV11 94 aa6.38□□□□□ -1.39
GPN3-201ENST00000228827 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
GPN3-201ENST00000228827 H3BS24 57 aa6.37□□□□□ -1.39
GPN3-201ENST00000228827 ATOX1O00244 68 aa6.35□□□□□ -1.39
GPN3-201ENST00000228827 KRTAP19-8Q3LI54 63 aa6.34□□□□□ -1.39
GPN3-201ENST00000228827 A6NN06 94 aa6.34□□□□□ -1.4
GPN3-201ENST00000228827 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
GPN3-201ENST00000228827 KRTAP6-3Q3LI67 103 aa6.3□□□□□ -1.4
GPN3-201ENST00000228827 LINC00208Q96KT6 92 aa6.29□□□□□ -1.4
GPN3-201ENST00000228827 NDUFC1O43677 76 aa6.28□□□□□ -1.4
GPN3-201ENST00000228827 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
GPN3-201ENST00000228827 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
GPN3-201ENST00000228827 SERP2Q8N6R1 65 aa6.26□□□□□ -1.41
GPN3-201ENST00000228827 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
GPN3-201ENST00000228827 CRIPTQ9P021 101 aa6.25□□□□□ -1.41
GPN3-201ENST00000228827 A8MUN3 132 aa6.23□□□□□ -1.41
GPN3-201ENST00000228827 MP68P56378 58 aa6.23□□□□□ -1.41
GPN3-201ENST00000228827 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
GPN3-201ENST00000228827 H0YAA0 97 aa6.21□□□□□ -1.42
GPN3-201ENST00000228827 COX7CP15954 63 aa6.21□□□□□ -1.42
GPN3-201ENST00000228827 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
GPN3-201ENST00000228827 PCP4P48539 62 aa6.16□□□□□ -1.42
GPN3-201ENST00000228827 H3BPC8 53 aa6.15□□□□□ -1.42
GPN3-201ENST00000228827 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
GPN3-201ENST00000228827 CCDC179H3BU77 68 aa6.1□□□□□ -1.43
GPN3-201ENST00000228827 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
GPN3-201ENST00000228827 SNURFQ9Y675 71 aa6.09□□□□□ -1.43
GPN3-201ENST00000228827 DMAC1Q96GE9 116 aa6.07□□□□□ -1.44
GPN3-201ENST00000228827 P0C880 135 aa6.05□□□□□ -1.44
GPN3-201ENST00000228827 R4GN34 69 aa6.02□□□□□ -1.44
GPN3-201ENST00000228827 NEBP20929 6669 aa6.02□□□□□ -1.45
GPN3-201ENST00000228827 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
GPN3-201ENST00000228827 M0QZ58 72 aa5.99□□□□□ -1.45
GPN3-201ENST00000228827 KRTAP5-9P26371 169 aa5.99□□□□□ -1.45
GPN3-201ENST00000228827 MT1XP80297 61 aa5.98□□□□□ -1.45
GPN3-201ENST00000228827 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
GPN3-201ENST00000228827 KMT2DO14686 5537 aa5.98□□□□□ -1.45
GPN3-201ENST00000228827 H7BZZ5 65 aa5.97□□□□□ -1.45
GPN3-201ENST00000228827 CYSTM1Q9H1C7 97 aa5.97□□□□□ -1.45
GPN3-201ENST00000228827 MDN1Q9NU22 5596 aa5.96□□□□□ -1.45
GPN3-201ENST00000228827 KRTAP19-4Q3LI73 84 aa5.94□□□□□ -1.46
GPN3-201ENST00000228827 LINC01554Q52M75 96 aa5.94□□□□□ -1.46
GPN3-201ENST00000228827 TMEM258P61165 79 aa5.93□□□□□ -1.46
GPN3-201ENST00000228827 SPANXA2-OT1Q8N9U9 137 aa5.93□□□□□ -1.46
GPN3-201ENST00000228827 ACYP2P14621 99 aa5.92□□□□□ -1.46
GPN3-201ENST00000228827 LCE5AQ5TCM9 118 aa5.92□□□□□ -1.46
GPN3-201ENST00000228827 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
GPN3-201ENST00000228827 KRTAP20-1Q3LI63 56 aa5.88□□□□□ -1.47
GPN3-201ENST00000228827 LCE4AQ5TA78 99 aa5.88□□□□□ -1.47
GPN3-201ENST00000228827 SPRR2FQ96RM1 72 aa5.86□□□□□ -1.47
GPN3-201ENST00000228827 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
GPN3-201ENST00000228827 CHKB-CPT1BH3BT56 60 aa5.83□□□□□ -1.48
GPN3-201ENST00000228827 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
GPN3-201ENST00000228827 KRTAP12-2P59991 146 aa5.81□□□□□ -1.48
GPN3-201ENST00000228827 SPRR2EP22531 72 aa5.78□□□□□ -1.48
GPN3-201ENST00000228827 SPRR2BP35325 72 aa5.78□□□□□ -1.48
GPN3-201ENST00000228827 SPRR2AP35326 72 aa5.78□□□□□ -1.48
GPN3-201ENST00000228827 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
GPN3-201ENST00000228827 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
GPN3-201ENST00000228827 COA5Q86WW8 74 aa5.73□□□□□ -1.49
GPN3-201ENST00000228827 KRTAP2-3P0C7H8 128 aa5.7□□□□□ -1.5
GPN3-201ENST00000228827 KRTAP2-4Q9BYR9 128 aa5.7□□□□□ -1.5
GPN3-201ENST00000228827 RPS28P62857 69 aaKnown RBP5.69□□□□□ -1.5
GPN3-201ENST00000228827 LCE1AQ5T7P2 110 aa5.68□□□□□ -1.5
GPN3-201ENST00000228827 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
GPN3-201ENST00000228827 KRTAP13-4Q3LI77 160 aa5.64□□□□□ -1.51
GPN3-201ENST00000228827 SMIM26A0A096LP01 95 aa5.58□□□□□ -1.52
GPN3-201ENST00000228827 SPRR2DP22532 72 aa5.58□□□□□ -1.52
GPN3-201ENST00000228827 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
GPN3-201ENST00000228827 V9GYY9 64 aa5.53□□□□□ -1.52
GPN3-201ENST00000228827 KRTAP2-2Q9BYT5 123 aa5.52□□□□□ -1.53
GPN3-201ENST00000228827 KRTAP2-1Q9BYU5 128 aa5.52□□□□□ -1.53
GPN3-201ENST00000228827 SEC61GP60059 68 aa5.51□□□□□ -1.53
GPN3-201ENST00000228827 A0A0D9SG42 100 aa5.5□□□□□ -1.53
GPN3-201ENST00000228827 Q1T7F1 81 aa5.48□□□□□ -1.53
GPN3-201ENST00000228827 LINC01558Q9Y6Z2 57 aa5.48□□□□□ -1.53
GPN3-201ENST00000228827 A0A1B0GU69 56 aa5.46□□□□□ -1.53
GPN3-201ENST00000228827 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.53
GPN3-201ENST00000228827 PRR15LQ9BU68 103 aa5.46□□□□□ -1.53
GPN3-201ENST00000228827 A0A1B0GU33 70 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms