RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 MT2AP02795 61 aa10.46□□□□□ -0.74
SLC25A39-201ENST00000225308 CYSTM1Q9H1C7 97 aa10.45□□□□□ -0.74
SLC25A39-201ENST00000225308 NDUFC1O43677 76 aa10.44□□□□□ -0.74
SLC25A39-201ENST00000225308 H7BZZ5 65 aa10.39□□□□□ -0.75
SLC25A39-201ENST00000225308 MT1FP04733 61 aa10.38□□□□□ -0.75
SLC25A39-201ENST00000225308 SPANXA2-OT1Q8N9U9 137 aa10.37□□□□□ -0.75
SLC25A39-201ENST00000225308 A8MUN3 132 aa10.36□□□□□ -0.75
SLC25A39-201ENST00000225308 S4R3F8 94 aa10.36□□□□□ -0.75
SLC25A39-201ENST00000225308 DMAC1Q96GE9 116 aa10.33□□□□□ -0.76
SLC25A39-201ENST00000225308 LCA10Q71F78 164 aa10.32□□□□□ -0.76
SLC25A39-201ENST00000225308 KRTAP10-10P60014 251 aa10.3□□□□□ -0.76
SLC25A39-201ENST00000225308 ACYP2P14621 99 aa10.24□□□□□ -0.77
SLC25A39-201ENST00000225308 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
SLC25A39-201ENST00000225308 KRTAP9-3Q9BYQ3 159 aa10.22□□□□□ -0.77
SLC25A39-201ENST00000225308 SERP1Q9Y6X1 66 aa10.22□□□□□ -0.77
SLC25A39-201ENST00000225308 CSAG1Q6PB30 78 aa10.22□□□□□ -0.77
SLC25A39-201ENST00000225308 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.77
SLC25A39-201ENST00000225308 ATP5EP56381 51 aaPredicted RBP10.2□□□□□ -0.78
SLC25A39-201ENST00000225308 LCE2BO14633 110 aa10.1□□□□□ -0.79
SLC25A39-201ENST00000225308 KRTAP9-6A0A140TA67 174 aa10.09□□□□□ -0.79
SLC25A39-201ENST00000225308 CRCT1Q9UGL9 99 aa10.08□□□□□ -0.8
SLC25A39-201ENST00000225308 USH2AO75445 5202 aa10.07□□□□□ -0.8
SLC25A39-201ENST00000225308 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
SLC25A39-201ENST00000225308 CHKB-CPT1BH3BT56 60 aa10.05□□□□□ -0.8
SLC25A39-201ENST00000225308 COA5Q86WW8 74 aa10.04□□□□□ -0.8
SLC25A39-201ENST00000225308 SPTSSBQ8NFR3 76 aa9.95□□□□□ -0.82
SLC25A39-201ENST00000225308 H0YAA0 97 aa9.9□□□□□ -0.82
SLC25A39-201ENST00000225308 SSPOA2VEC9 5147 aa9.9□□□□□ -0.83
SLC25A39-201ENST00000225308 KRTAP19-1Q8IUB9 90 aa9.89□□□□□ -0.83
SLC25A39-201ENST00000225308 PRO0628Q9UI54 55 aa9.83□□□□□ -0.84
SLC25A39-201ENST00000225308 SPRR2GQ9BYE4 73 aa9.82□□□□□ -0.84
SLC25A39-201ENST00000225308 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
SLC25A39-201ENST00000225308 CRIPTQ9P021 101 aa9.74□□□□□ -0.85
SLC25A39-201ENST00000225308 Q1T7F1 81 aa9.69□□□□□ -0.86
SLC25A39-201ENST00000225308 KRTAP19-8Q3LI54 63 aa9.67□□□□□ -0.86
SLC25A39-201ENST00000225308 P0C880 135 aa9.66□□□□□ -0.86
SLC25A39-201ENST00000225308 KRTAP19-6Q3LI70 58 aa9.65□□□□□ -0.86
SLC25A39-201ENST00000225308 KRTAP3-2Q9BYR7 98 aa9.65□□□□□ -0.86
SLC25A39-201ENST00000225308 MT1BP07438 61 aa9.64□□□□□ -0.87
SLC25A39-201ENST00000225308 FCGBPQ9Y6R7 5405 aaPredicted RBP9.64□□□□□ -0.87
SLC25A39-201ENST00000225308 Q5VV11 94 aa9.61□□□□□ -0.87
SLC25A39-201ENST00000225308 V9GYY9 64 aa9.61□□□□□ -0.87
SLC25A39-201ENST00000225308 SEC61GP60059 68 aa9.59□□□□□ -0.87
SLC25A39-201ENST00000225308 BRK1Q8WUW1 75 aa9.59□□□□□ -0.87
SLC25A39-201ENST00000225308 A0A1B0GU69 56 aa9.53□□□□□ -0.88
SLC25A39-201ENST00000225308 LINC01558Q9Y6Z2 57 aa9.53□□□□□ -0.88
SLC25A39-201ENST00000225308 R4GN34 69 aa9.51□□□□□ -0.89
SLC25A39-201ENST00000225308 M0QZ58 72 aa9.45□□□□□ -0.9
SLC25A39-201ENST00000225308 PRR15LQ9BU68 103 aa9.45□□□□□ -0.9
SLC25A39-201ENST00000225308 PSPHP1O15172 72 aa9.38□□□□□ -0.91
SLC25A39-201ENST00000225308 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.38□□□□□ -0.91
SLC25A39-201ENST00000225308 A0A1B0GU33 70 aa9.36□□□□□ -0.91
SLC25A39-201ENST00000225308 A6NN06 94 aa9.34□□□□□ -0.91
SLC25A39-201ENST00000225308 KRTAP10-5P60370 271 aa9.31□□□□□ -0.92
SLC25A39-201ENST00000225308 LINC01554Q52M75 96 aa9.3□□□□□ -0.92
SLC25A39-201ENST00000225308 KRTAP13-4Q3LI77 160 aa9.27□□□□□ -0.92
SLC25A39-201ENST00000225308 PLAC4Q8WY50 150 aa9.24□□□□□ -0.93
SLC25A39-201ENST00000225308 SPATA8Q6RVD6 105 aa9.23□□□□□ -0.93
SLC25A39-201ENST00000225308 PMAIP1Q13794 54 aa9.2□□□□□ -0.94
SLC25A39-201ENST00000225308 MACF1Q9UPN3 7388 aaKnown RBP9.19□□□□□ -0.94
SLC25A39-201ENST00000225308 UQCR11O14957 56 aa9.16□□□□□ -0.94
SLC25A39-201ENST00000225308 MT1XP80297 61 aa9.14□□□□□ -0.95
SLC25A39-201ENST00000225308 KRTAP9-7A8MTY7 169 aa9.13□□□□□ -0.95
SLC25A39-201ENST00000225308 CDC42SE1Q9NRR8 79 aa9.13□□□□□ -0.95
SLC25A39-201ENST00000225308 A6NED7 52 aa9.12□□□□□ -0.95
SLC25A39-201ENST00000225308 PRO2289Q9P1D8 64 aa9.09□□□□□ -0.95
SLC25A39-201ENST00000225308 A0A0D9SG42 100 aa9.07□□□□□ -0.96
SLC25A39-201ENST00000225308 A8MU10 97 aa9.05□□□□□ -0.96
SLC25A39-201ENST00000225308 MIR22HGQ0VDD5 57 aa9.02□□□□□ -0.96
SLC25A39-201ENST00000225308 SYNE2Q8WXH0 6885 aaKnown RBP9.01□□□□□ -0.97
SLC25A39-201ENST00000225308 KTN1-AS1Q86SY8 53 aa8.99□□□□□ -0.97
SLC25A39-201ENST00000225308 KRTAP12-1P59990 96 aa8.91□□□□□ -0.98
SLC25A39-201ENST00000225308 SPINT4Q6UDR6 99 aa8.91□□□□□ -0.98
SLC25A39-201ENST00000225308 KRTAP6-3Q3LI67 103 aa8.88□□□□□ -0.99
SLC25A39-201ENST00000225308 KRTAP12-2P59991 146 aa8.87□□□□□ -0.99
SLC25A39-201ENST00000225308 KMT2DO14686 5537 aa8.81□□□□□ -1
SLC25A39-201ENST00000225308 CAMK2N1Q7Z7J9 78 aa8.79□□□□□ -1
SLC25A39-201ENST00000225308 KRTAP10-7P60409 375 aaPredicted RBP8.73□□□□□ -1.01
SLC25A39-201ENST00000225308 K7ERS5 55 aa8.69□□□□□ -1.02
SLC25A39-201ENST00000225308 KRTAP5-9P26371 169 aa8.69□□□□□ -1.02
SLC25A39-201ENST00000225308 KRTAP10-12P60413 245 aa8.68□□□□□ -1.02
SLC25A39-201ENST00000225308 KRTAP4-8A0A0G2JLE6 195 aa8.62□□□□□ -1.03
SLC25A39-201ENST00000225308 KRTAP4-8Q9BYQ9 185 aa8.62□□□□□ -1.03
SLC25A39-201ENST00000225308 MUC12Q9UKN1 5478 aa8.6□□□□□ -1.03
SLC25A39-201ENST00000225308 KRTAP8-1Q8IUC2 63 aa8.58□□□□□ -1.04
SLC25A39-201ENST00000225308 SPRR2FQ96RM1 72 aa8.5□□□□□ -1.05
SLC25A39-201ENST00000225308 MDN1Q9NU22 5596 aa8.46□□□□□ -1.06
SLC25A39-201ENST00000225308 C10orf95Q9H7T3 257 aa8.45□□□□□ -1.06
SLC25A39-201ENST00000225308 PRAC1Q96KF2 57 aa8.41□□□□□ -1.06
SLC25A39-201ENST00000225308 NEBP20929 6669 aa8.37□□□□□ -1.07
SLC25A39-201ENST00000225308 TNP1P09430 55 aa8.29□□□□□ -1.08
SLC25A39-201ENST00000225308 SPRR2EP22531 72 aa8.26□□□□□ -1.09
SLC25A39-201ENST00000225308 SPRR2BP35325 72 aa8.26□□□□□ -1.09
SLC25A39-201ENST00000225308 SPRR2AP35326 72 aa8.26□□□□□ -1.09
SLC25A39-201ENST00000225308 ROMO1P60602 79 aa8.25□□□□□ -1.09
SLC25A39-201ENST00000225308 LCE1AQ5T7P2 110 aa8.25□□□□□ -1.09
SLC25A39-201ENST00000225308 KRTAP19-7Q3SYF9 63 aa8.18□□□□□ -1.1
SLC25A39-201ENST00000225308 KRTAP25-1Q3LHN0 102 aa8.17□□□□□ -1.1
SLC25A39-201ENST00000225308 LCE3AQ5TA76 89 aa8.07□□□□□ -1.12
SLC25A39-201ENST00000225308 MT1EP04732 61 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms