RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 H3BPC8 53 aa7.49□□□□□ -1.21
EBI3-201ENST00000221847 USH2AO75445 5202 aa7.48□□□□□ -1.21
EBI3-201ENST00000221847 FAM236AA0A1B0GUQ0 79 aa7.47□□□□□ -1.21
EBI3-201ENST00000221847 FAM236BA0A1B0GV22 79 aa7.47□□□□□ -1.21
EBI3-201ENST00000221847 TRAV7A0A075B6U4 112 aa7.42□□□□□ -1.22
EBI3-201ENST00000221847 A8MUN3 132 aa7.42□□□□□ -1.22
EBI3-201ENST00000221847 SMIM20Q8N5G0 67 aa7.41□□□□□ -1.22
EBI3-201ENST00000221847 NDUFC1O43677 76 aa7.36□□□□□ -1.23
EBI3-201ENST00000221847 SSPOA2VEC9 5147 aa7.32□□□□□ -1.24
EBI3-201ENST00000221847 DMAC1Q96GE9 116 aa7.31□□□□□ -1.24
EBI3-201ENST00000221847 KRTAP19-1Q8IUB9 90 aa7.28□□□□□ -1.24
EBI3-201ENST00000221847 SNURFQ9Y675 71 aa7.26□□□□□ -1.25
EBI3-201ENST00000221847 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
EBI3-201ENST00000221847 H0YAA0 97 aa7.21□□□□□ -1.26
EBI3-201ENST00000221847 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
EBI3-201ENST00000221847 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.26
EBI3-201ENST00000221847 ACYP2P14621 99 aa7.18□□□□□ -1.26
EBI3-201ENST00000221847 KRTAP19-6Q3LI70 58 aa7.18□□□□□ -1.26
EBI3-201ENST00000221847 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
EBI3-201ENST00000221847 FCGBPQ9Y6R7 5405 aaPredicted RBP7.17□□□□□ -1.26
EBI3-201ENST00000221847 CRIPTQ9P021 101 aa7.16□□□□□ -1.26
EBI3-201ENST00000221847 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
EBI3-201ENST00000221847 MT1BP07438 61 aa7.12□□□□□ -1.27
EBI3-201ENST00000221847 Q5VV11 94 aa7.11□□□□□ -1.27
EBI3-201ENST00000221847 SPANXA2-OT1Q8N9U9 137 aa7.1□□□□□ -1.27
EBI3-201ENST00000221847 COX7CP15954 63 aa7.08□□□□□ -1.28
EBI3-201ENST00000221847 P0C880 135 aa7.06□□□□□ -1.28
EBI3-201ENST00000221847 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
EBI3-201ENST00000221847 CHKB-CPT1BH3BT56 60 aa7.05□□□□□ -1.28
EBI3-201ENST00000221847 SPTSSBQ8NFR3 76 aa7.03□□□□□ -1.28
EBI3-201ENST00000221847 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
EBI3-201ENST00000221847 R4GN34 69 aa6.96□□□□□ -1.3
EBI3-201ENST00000221847 ANAPC13Q9BS18 74 aa6.95□□□□□ -1.3
EBI3-201ENST00000221847 A6NN06 94 aa6.93□□□□□ -1.3
EBI3-201ENST00000221847 H7BZZ5 65 aa6.93□□□□□ -1.3
EBI3-201ENST00000221847 M0QZ58 72 aa6.93□□□□□ -1.3
EBI3-201ENST00000221847 COA5Q86WW8 74 aa6.91□□□□□ -1.3
EBI3-201ENST00000221847 KRTAP10-5P60370 271 aa6.9□□□□□ -1.3
EBI3-201ENST00000221847 KRTAP9-7A8MTY7 169 aa6.89□□□□□ -1.31
EBI3-201ENST00000221847 MACF1Q9UPN3 7388 aaKnown RBP6.83□□□□□ -1.32
EBI3-201ENST00000221847 CCDC179H3BU77 68 aa6.83□□□□□ -1.32
EBI3-201ENST00000221847 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
EBI3-201ENST00000221847 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
EBI3-201ENST00000221847 MT1XP80297 61 aa6.73□□□□□ -1.33
EBI3-201ENST00000221847 PRO2289Q9P1D8 64 aa6.7□□□□□ -1.34
EBI3-201ENST00000221847 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
EBI3-201ENST00000221847 SEC61GP60059 68 aa6.68□□□□□ -1.34
EBI3-201ENST00000221847 SYNE2Q8WXH0 6885 aaKnown RBP6.68□□□□□ -1.34
EBI3-201ENST00000221847 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
EBI3-201ENST00000221847 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
EBI3-201ENST00000221847 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
EBI3-201ENST00000221847 ATP5EP56381 51 aaPredicted RBP6.63□□□□□ -1.35
EBI3-201ENST00000221847 PCP4P48539 62 aa6.6□□□□□ -1.35
EBI3-201ENST00000221847 A0A1B0GU33 70 aa6.56□□□□□ -1.36
EBI3-201ENST00000221847 TMEM258P61165 79 aa6.55□□□□□ -1.36
EBI3-201ENST00000221847 A0A1B0GU69 56 aa6.54□□□□□ -1.36
EBI3-201ENST00000221847 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
EBI3-201ENST00000221847 A0A0D9SG42 100 aa6.51□□□□□ -1.37
EBI3-201ENST00000221847 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
EBI3-201ENST00000221847 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
EBI3-201ENST00000221847 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
EBI3-201ENST00000221847 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
EBI3-201ENST00000221847 KMT2DO14686 5537 aa6.44□□□□□ -1.38
EBI3-201ENST00000221847 KRTAP19-4Q3LI73 84 aa6.42□□□□□ -1.38
EBI3-201ENST00000221847 LINC01558Q9Y6Z2 57 aa6.41□□□□□ -1.38
EBI3-201ENST00000221847 SPINT4Q6UDR6 99 aa6.39□□□□□ -1.39
EBI3-201ENST00000221847 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
EBI3-201ENST00000221847 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
EBI3-201ENST00000221847 KRTAP12-1P59990 96 aa6.38□□□□□ -1.39
EBI3-201ENST00000221847 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
EBI3-201ENST00000221847 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
EBI3-201ENST00000221847 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
EBI3-201ENST00000221847 SMIM26A0A096LP01 95 aa6.36□□□□□ -1.39
EBI3-201ENST00000221847 MUC12Q9UKN1 5478 aa6.35□□□□□ -1.39
EBI3-201ENST00000221847 A8MU10 97 aa6.35□□□□□ -1.39
EBI3-201ENST00000221847 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
EBI3-201ENST00000221847 NEBP20929 6669 aa6.3□□□□□ -1.4
EBI3-201ENST00000221847 MDN1Q9NU22 5596 aa6.25□□□□□ -1.41
EBI3-201ENST00000221847 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
EBI3-201ENST00000221847 UQCR11O14957 56 aa6.19□□□□□ -1.42
EBI3-201ENST00000221847 SPRR2EP22531 72 aa6.18□□□□□ -1.42
EBI3-201ENST00000221847 SPRR2BP35325 72 aa6.18□□□□□ -1.42
EBI3-201ENST00000221847 SPRR2AP35326 72 aa6.18□□□□□ -1.42
EBI3-201ENST00000221847 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
EBI3-201ENST00000221847 V9GYY9 64 aa6.14□□□□□ -1.43
EBI3-201ENST00000221847 Q1T7F1 81 aa6.13□□□□□ -1.43
EBI3-201ENST00000221847 PSPHP1O15172 72 aa6.12□□□□□ -1.43
EBI3-201ENST00000221847 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
EBI3-201ENST00000221847 C10orf95Q9H7T3 257 aa6.09□□□□□ -1.43
EBI3-201ENST00000221847 KRTAP20-1Q3LI63 56 aa6.07□□□□□ -1.44
EBI3-201ENST00000221847 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
EBI3-201ENST00000221847 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
EBI3-201ENST00000221847 RPS28P62857 69 aaKnown RBP6.01□□□□□ -1.45
EBI3-201ENST00000221847 KRTAP19-7Q3SYF9 63 aa6.01□□□□□ -1.45
EBI3-201ENST00000221847 TNP1P09430 55 aa5.99□□□□□ -1.45
EBI3-201ENST00000221847 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
EBI3-201ENST00000221847 SPRR2DP22532 72 aa5.97□□□□□ -1.45
EBI3-201ENST00000221847 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
EBI3-201ENST00000221847 MT1EP04732 61 aa5.94□□□□□ -1.46
EBI3-201ENST00000221847 KRTAP19-5Q3LI72 72 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms