RNA–Protein interactions for RNA: ENST00000221554.12

CCDC130-201, Transcript of coiled-coil domain containing 130, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC130, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-201ENST00000221554 LRP1Q07954 4544 aaKnown RBP11.11□□□□□ -0.63
CCDC130-201ENST00000221554 RPL37P61927 97 aaKnown RBP11.06□□□□□ -0.64
CCDC130-201ENST00000221554 FAT3Q8TDW7 4589 aa11.03□□□□□ -0.64
CCDC130-201ENST00000221554 A0A1B0GU33 70 aa10.99□□□□□ -0.65
CCDC130-201ENST00000221554 RBM12B-AS1Q9P1G2 102 aa10.98□□□□□ -0.65
CCDC130-201ENST00000221554 H1FX-AS1Q4G0G2 97 aa10.95□□□□□ -0.66
CCDC130-201ENST00000221554 XP32Q5T750 250 aa10.95□□□□□ -0.66
CCDC130-201ENST00000221554 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
CCDC130-201ENST00000221554 TNXBP22105 4242 aa10.9□□□□□ -0.66
CCDC130-201ENST00000221554 H0YAA0 97 aa10.88□□□□□ -0.67
CCDC130-201ENST00000221554 MT1HL1P0DM35 61 aa10.82□□□□□ -0.68
CCDC130-201ENST00000221554 S4R3F8 94 aa10.76□□□□□ -0.69
CCDC130-201ENST00000221554 HERC1Q15751 4861 aa10.74□□□□□ -0.69
CCDC130-201ENST00000221554 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
CCDC130-201ENST00000221554 K7ERS5 55 aa10.73□□□□□ -0.69
CCDC130-201ENST00000221554 PRAC1Q96KF2 57 aa10.73□□□□□ -0.69
CCDC130-201ENST00000221554 TPRXLQ17RH7 258 aa10.71□□□□□ -0.69
CCDC130-201ENST00000221554 ADM2Q7Z4H4 148 aa10.7□□□□□ -0.7
CCDC130-201ENST00000221554 J3QL48 77 aa10.69□□□□□ -0.7
CCDC130-201ENST00000221554 KRTAP10-6P60371 365 aaPredicted RBP10.62□□□□□ -0.71
CCDC130-201ENST00000221554 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
CCDC130-201ENST00000221554 CSAG1Q6PB30 78 aa10.54□□□□□ -0.72
CCDC130-201ENST00000221554 LINC01554Q52M75 96 aa10.52□□□□□ -0.73
CCDC130-201ENST00000221554 HMCN2Q8NDA2 5059 aa10.41□□□□□ -0.74
CCDC130-201ENST00000221554 KRTAP13-4Q3LI77 160 aa10.39□□□□□ -0.75
CCDC130-201ENST00000221554 P0C880 135 aa10.37□□□□□ -0.75
CCDC130-201ENST00000221554 KRTAP25-1Q3LHN0 102 aa10.37□□□□□ -0.75
CCDC130-201ENST00000221554 SEC61BP60468 96 aaKnown RBP10.35□□□□□ -0.75
CCDC130-201ENST00000221554 ROMO1P60602 79 aa10.35□□□□□ -0.75
CCDC130-201ENST00000221554 LPAP08519 4548 aa10.32□□□□□ -0.76
CCDC130-201ENST00000221554 A0A0D9SG42 100 aa10.31□□□□□ -0.76
CCDC130-201ENST00000221554 M0QZ58 72 aa10.29□□□□□ -0.76
CCDC130-201ENST00000221554 LRP2P98164 4655 aa10.27□□□□□ -0.77
CCDC130-201ENST00000221554 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
CCDC130-201ENST00000221554 KRTAP12-1P59990 96 aa10.1□□□□□ -0.79
CCDC130-201ENST00000221554 KRTAP12-2P59991 146 aa10.09□□□□□ -0.79
CCDC130-201ENST00000221554 SPINT4Q6UDR6 99 aa10.05□□□□□ -0.8
CCDC130-201ENST00000221554 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
CCDC130-201ENST00000221554 R4GN34 69 aa9.97□□□□□ -0.81
CCDC130-201ENST00000221554 KRTAP4-1Q9BYQ7 146 aa9.92□□□□□ -0.82
CCDC130-201ENST00000221554 RNF213Q63HN8 5207 aa9.91□□□□□ -0.82
CCDC130-201ENST00000221554 MUC2Q02817 5179 aa9.84□□□□□ -0.83
CCDC130-201ENST00000221554 MUC17Q685J3 4493 aa9.84□□□□□ -0.83
CCDC130-201ENST00000221554 KRTAP19-2Q3LHN2 52 aa9.82□□□□□ -0.84
CCDC130-201ENST00000221554 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
CCDC130-201ENST00000221554 LORP23490 312 aaPredicted RBP9.67□□□□□ -0.86
CCDC130-201ENST00000221554 FAT4Q6V0I7 4981 aa9.46□□□□□ -0.89
CCDC130-201ENST00000221554 CAMK2N1Q7Z7J9 78 aa9.45□□□□□ -0.9
CCDC130-201ENST00000221554 FLGP20930 4061 aaPredicted RBP9.4□□□□□ -0.9
CCDC130-201ENST00000221554 KRTAP15-1Q3LI76 137 aa9.38□□□□□ -0.91
CCDC130-201ENST00000221554 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
CCDC130-201ENST00000221554 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
CCDC130-201ENST00000221554 H3BS24 57 aa9.23□□□□□ -0.93
CCDC130-201ENST00000221554 LCE2AQ5TA79 106 aaPredicted RBP9.17□□□□□ -0.94
CCDC130-201ENST00000221554 KRTAP23-1A1A580 65 aa9.16□□□□□ -0.94
CCDC130-201ENST00000221554 SPRR2GQ9BYE4 73 aa9.15□□□□□ -0.94
CCDC130-201ENST00000221554 TNP1P09430 55 aa9.14□□□□□ -0.95
CCDC130-201ENST00000221554 MT1HP80294 61 aa9.12□□□□□ -0.95
CCDC130-201ENST00000221554 PLAC4Q8WY50 150 aa9.12□□□□□ -0.95
CCDC130-201ENST00000221554 M0R2T5 61 aa9.1□□□□□ -0.95
CCDC130-201ENST00000221554 NDUFAF8A1L188 74 aa9.01□□□□□ -0.97
CCDC130-201ENST00000221554 KRTAP19-1Q8IUB9 90 aa8.99□□□□□ -0.97
CCDC130-201ENST00000221554 KRTAP10-10P60014 251 aa8.89□□□□□ -0.99
CCDC130-201ENST00000221554 MT2AP02795 61 aa8.88□□□□□ -0.99
CCDC130-201ENST00000221554 MT1FP04733 61 aa8.84□□□□□ -1
CCDC130-201ENST00000221554 KRTAP9-8Q9BYQ0 159 aa8.84□□□□□ -1
CCDC130-201ENST00000221554 KRTAP19-8Q3LI54 63 aa8.78□□□□□ -1
CCDC130-201ENST00000221554 LUZP6Q538Z0 58 aa8.73□□□□□ -1.01
CCDC130-201ENST00000221554 SPRR5A0A1B0GTR4 108 aa8.55□□□□□ -1.04
CCDC130-201ENST00000221554 MT1BP07438 61 aa8.55□□□□□ -1.04
CCDC130-201ENST00000221554 LCE3AQ5TA76 89 aa8.52□□□□□ -1.05
CCDC130-201ENST00000221554 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
CCDC130-201ENST00000221554 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
CCDC130-201ENST00000221554 KRTAP10-5P60370 271 aa8.48□□□□□ -1.05
CCDC130-201ENST00000221554 LCE2DQ5TA82 110 aaPredicted RBP8.46□□□□□ -1.05
CCDC130-201ENST00000221554 MT1XP80297 61 aa8.45□□□□□ -1.06
CCDC130-201ENST00000221554 KRTAP8-1Q8IUC2 63 aa8.44□□□□□ -1.06
CCDC130-201ENST00000221554 FSIP2Q5CZC0 6907 aa8.41□□□□□ -1.06
CCDC130-201ENST00000221554 PRO2289Q9P1D8 64 aa8.38□□□□□ -1.07
CCDC130-201ENST00000221554 USH2AO75445 5202 aa8.32□□□□□ -1.08
CCDC130-201ENST00000221554 LCE2BO14633 110 aa8.31□□□□□ -1.08
CCDC130-201ENST00000221554 KRTAP10-12P60413 245 aa8.31□□□□□ -1.08
CCDC130-201ENST00000221554 A0A0A0MQY5 61 aa8.2□□□□□ -1.1
CCDC130-201ENST00000221554 KRTAP12-3P60328 96 aa8.2□□□□□ -1.1
CCDC130-201ENST00000221554 SSPOA2VEC9 5147 aa8.16□□□□□ -1.1
CCDC130-201ENST00000221554 KRTAP10-7P60409 375 aaPredicted RBP8.15□□□□□ -1.11
CCDC130-201ENST00000221554 CRCT1Q9UGL9 99 aa8.09□□□□□ -1.11
CCDC130-201ENST00000221554 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
CCDC130-201ENST00000221554 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
CCDC130-201ENST00000221554 KRTAP19-6Q3LI70 58 aa7.87□□□□□ -1.15
CCDC130-201ENST00000221554 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
CCDC130-201ENST00000221554 LCE3CQ5T5A8 94 aa7.72□□□□□ -1.17
CCDC130-201ENST00000221554 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.17
CCDC130-201ENST00000221554 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
CCDC130-201ENST00000221554 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
CCDC130-201ENST00000221554 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
CCDC130-201ENST00000221554 INE1O15225 51 aa7.53□□□□□ -1.2
CCDC130-201ENST00000221554 KRTAP19-7Q3SYF9 63 aa7.53□□□□□ -1.2
CCDC130-201ENST00000221554 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
CCDC130-201ENST00000221554 SYNE2Q8WXH0 6885 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms