RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 COX6B2Q6YFQ2 88 aa7.84□□□□□ -1.15
TRMT1-201ENST00000221504 PRAC1Q96KF2 57 aa7.84□□□□□ -1.15
TRMT1-201ENST00000221504 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
TRMT1-201ENST00000221504 DMBT1Q9UGM3 2413 aaPredicted RBP7.83□□□□□ -1.16
TRMT1-201ENST00000221504 ABCA13Q86UQ4 5058 aa7.82□□□□□ -1.16
TRMT1-201ENST00000221504 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
TRMT1-201ENST00000221504 RPL37P61927 97 aaKnown RBP7.8□□□□□ -1.16
TRMT1-201ENST00000221504 XP32Q5T750 250 aa7.77□□□□□ -1.17
TRMT1-201ENST00000221504 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
TRMT1-201ENST00000221504 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
TRMT1-201ENST00000221504 H0YAA0 97 aa7.7□□□□□ -1.18
TRMT1-201ENST00000221504 A0A1B0GU33 70 aa7.69□□□□□ -1.18
TRMT1-201ENST00000221504 H1FX-AS1Q4G0G2 97 aa7.67□□□□□ -1.18
TRMT1-201ENST00000221504 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
TRMT1-201ENST00000221504 LINC01554Q52M75 96 aa7.59□□□□□ -1.19
TRMT1-201ENST00000221504 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
TRMT1-201ENST00000221504 S4R3F8 94 aa7.57□□□□□ -1.2
TRMT1-201ENST00000221504 TPRXLQ17RH7 258 aa7.55□□□□□ -1.2
TRMT1-201ENST00000221504 HERC1Q15751 4861 aa7.53□□□□□ -1.2
TRMT1-201ENST00000221504 KRTAP10-6P60371 365 aaPredicted RBP7.52□□□□□ -1.21
TRMT1-201ENST00000221504 LRP2P98164 4655 aa7.49□□□□□ -1.21
TRMT1-201ENST00000221504 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
TRMT1-201ENST00000221504 LPAP08519 4548 aa7.47□□□□□ -1.21
TRMT1-201ENST00000221504 K7ERS5 55 aa7.41□□□□□ -1.22
TRMT1-201ENST00000221504 KRTAP13-4Q3LI77 160 aa7.4□□□□□ -1.22
TRMT1-201ENST00000221504 J3QL48 77 aa7.37□□□□□ -1.23
TRMT1-201ENST00000221504 P0C880 135 aa7.37□□□□□ -1.23
TRMT1-201ENST00000221504 KRTAP25-1Q3LHN0 102 aa7.35□□□□□ -1.23
TRMT1-201ENST00000221504 A0A0D9SG42 100 aa7.32□□□□□ -1.24
TRMT1-201ENST00000221504 SEC61BP60468 96 aaKnown RBP7.26□□□□□ -1.25
TRMT1-201ENST00000221504 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
TRMT1-201ENST00000221504 ROMO1P60602 79 aa7.22□□□□□ -1.25
TRMT1-201ENST00000221504 HMCN2Q8NDA2 5059 aa7.19□□□□□ -1.26
TRMT1-201ENST00000221504 MUC17Q685J3 4493 aa7.19□□□□□ -1.26
TRMT1-201ENST00000221504 M0QZ58 72 aa7.16□□□□□ -1.26
TRMT1-201ENST00000221504 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
TRMT1-201ENST00000221504 KRTAP4-1Q9BYQ7 146 aa7.15□□□□□ -1.27
TRMT1-201ENST00000221504 KRTAP12-1P59990 96 aa7.13□□□□□ -1.27
TRMT1-201ENST00000221504 UBR4Q5T4S7 5183 aa7.12□□□□□ -1.27
TRMT1-201ENST00000221504 H3BS24 57 aa7.1□□□□□ -1.27
TRMT1-201ENST00000221504 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
TRMT1-201ENST00000221504 KRTAP19-2Q3LHN2 52 aa7.02□□□□□ -1.29
TRMT1-201ENST00000221504 R4GN34 69 aa7.01□□□□□ -1.29
TRMT1-201ENST00000221504 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.29
TRMT1-201ENST00000221504 LORP23490 312 aaPredicted RBP6.94□□□□□ -1.3
TRMT1-201ENST00000221504 MUC2Q02817 5179 aa6.87□□□□□ -1.31
TRMT1-201ENST00000221504 RNF213Q63HN8 5207 aa6.86□□□□□ -1.31
TRMT1-201ENST00000221504 FLGP20930 4061 aaPredicted RBP6.85□□□□□ -1.31
TRMT1-201ENST00000221504 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
TRMT1-201ENST00000221504 LCE2CQ5TA81 110 aa6.65□□□□□ -1.35
TRMT1-201ENST00000221504 CAMK2N1Q7Z7J9 78 aa6.64□□□□□ -1.35
TRMT1-201ENST00000221504 NDUFAF8A1L188 74 aa6.61□□□□□ -1.35
TRMT1-201ENST00000221504 KRTAP9-2Q9BYQ4 174 aa6.57□□□□□ -1.36
TRMT1-201ENST00000221504 FAT4Q6V0I7 4981 aa6.57□□□□□ -1.36
TRMT1-201ENST00000221504 MT1HP80294 61 aa6.47□□□□□ -1.37
TRMT1-201ENST00000221504 M0R2T5 61 aa6.47□□□□□ -1.37
TRMT1-201ENST00000221504 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
TRMT1-201ENST00000221504 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
TRMT1-201ENST00000221504 SPRR2GQ9BYE4 73 aa6.46□□□□□ -1.38
TRMT1-201ENST00000221504 KRTAP9-6A0A140TA67 174 aa6.44□□□□□ -1.38
TRMT1-201ENST00000221504 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
TRMT1-201ENST00000221504 TNP1P09430 55 aa6.38□□□□□ -1.39
TRMT1-201ENST00000221504 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
TRMT1-201ENST00000221504 MT2AP02795 61 aa6.34□□□□□ -1.39
TRMT1-201ENST00000221504 MT1FP04733 61 aa6.34□□□□□ -1.4
TRMT1-201ENST00000221504 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
TRMT1-201ENST00000221504 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
TRMT1-201ENST00000221504 KRTAP23-1A1A580 65 aa6.3□□□□□ -1.4
TRMT1-201ENST00000221504 LCE2DQ5TA82 110 aaPredicted RBP6.22□□□□□ -1.41
TRMT1-201ENST00000221504 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
TRMT1-201ENST00000221504 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
TRMT1-201ENST00000221504 MT1BP07438 61 aa6.11□□□□□ -1.43
TRMT1-201ENST00000221504 LUZP6Q538Z0 58 aa6.07□□□□□ -1.44
TRMT1-201ENST00000221504 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
TRMT1-201ENST00000221504 KRTAP9-3Q9BYQ3 159 aa6.06□□□□□ -1.44
TRMT1-201ENST00000221504 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
TRMT1-201ENST00000221504 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
TRMT1-201ENST00000221504 MT1XP80297 61 aa6.03□□□□□ -1.44
TRMT1-201ENST00000221504 SPRR5A0A1B0GTR4 108 aa5.97□□□□□ -1.45
TRMT1-201ENST00000221504 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
TRMT1-201ENST00000221504 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
TRMT1-201ENST00000221504 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
TRMT1-201ENST00000221504 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
TRMT1-201ENST00000221504 KRTAP10-7P60409 375 aaPredicted RBP5.84□□□□□ -1.47
TRMT1-201ENST00000221504 LCE2BO14633 110 aa5.82□□□□□ -1.48
TRMT1-201ENST00000221504 KRTAP12-3P60328 96 aa5.78□□□□□ -1.48
TRMT1-201ENST00000221504 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
TRMT1-201ENST00000221504 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.75□□□□□ -1.49
TRMT1-201ENST00000221504 USH2AO75445 5202 aa5.66□□□□□ -1.5
TRMT1-201ENST00000221504 SSPOA2VEC9 5147 aa5.63□□□□□ -1.51
TRMT1-201ENST00000221504 KRTAP19-5Q3LI72 72 aa5.57□□□□□ -1.52
TRMT1-201ENST00000221504 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
TRMT1-201ENST00000221504 KMT2DO14686 5537 aa5.5□□□□□ -1.53
TRMT1-201ENST00000221504 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
TRMT1-201ENST00000221504 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
TRMT1-201ENST00000221504 LCE3CQ5T5A8 94 aa5.43□□□□□ -1.54
TRMT1-201ENST00000221504 MACF1Q9UPN3 7388 aaKnown RBP5.41□□□□□ -1.54
TRMT1-201ENST00000221504 KRTAP19-7Q3SYF9 63 aa5.38□□□□□ -1.55
TRMT1-201ENST00000221504 SYNE2Q8WXH0 6885 aaKnown RBP5.37□□□□□ -1.55
TRMT1-201ENST00000221504 KRTAP19-6Q3LI70 58 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms