RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 A8MWP4 228 aa6.46□□□□□ -1.38
CDKL1-201ENST00000216378 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
CDKL1-201ENST00000216378 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
CDKL1-201ENST00000216378 KRTAP4-6Q9BYQ5 205 aa6.44□□□□□ -1.38
CDKL1-201ENST00000216378 MMP24-AS1A0A0U1RRL7 71 aa6.42□□□□□ -1.38
CDKL1-201ENST00000216378 UQCR11O14957 56 aa6.42□□□□□ -1.38
CDKL1-201ENST00000216378 TYMSOSQ8TAI1 123 aa6.41□□□□□ -1.38
CDKL1-201ENST00000216378 A0A1B0GU69 56 aa6.4□□□□□ -1.38
CDKL1-201ENST00000216378 SSBP3-AS1Q7Z2R9 100 aa6.4□□□□□ -1.39
CDKL1-201ENST00000216378 TP53AIP1Q9HCN2 124 aa6.38□□□□□ -1.39
CDKL1-201ENST00000216378 A0A1B0GVX0 72 aa6.38□□□□□ -1.39
CDKL1-201ENST00000216378 C8orf17Q9NRJ1 99 aa6.38□□□□□ -1.39
CDKL1-201ENST00000216378 RNF213Q63HN8 5207 aa6.37□□□□□ -1.39
CDKL1-201ENST00000216378 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
CDKL1-201ENST00000216378 A8MUU9 505 aa6.35□□□□□ -1.39
CDKL1-201ENST00000216378 MUC2Q02817 5179 aa6.33□□□□□ -1.4
CDKL1-201ENST00000216378 LINC00304Q8N9R0 145 aa6.33□□□□□ -1.4
CDKL1-201ENST00000216378 ACYP2P14621 99 aa6.31□□□□□ -1.4
CDKL1-201ENST00000216378 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
CDKL1-201ENST00000216378 C20orf166-AS1Q96NR2 134 aa6.28□□□□□ -1.4
CDKL1-201ENST00000216378 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
CDKL1-201ENST00000216378 Q5W150 140 aa6.27□□□□□ -1.4
CDKL1-201ENST00000216378 NDUFAF8A1L188 74 aa6.24□□□□□ -1.41
CDKL1-201ENST00000216378 C9orf92A6NGG3 77 aa6.23□□□□□ -1.41
CDKL1-201ENST00000216378 SPINK1P00995 79 aa6.23□□□□□ -1.41
CDKL1-201ENST00000216378 KRTAP13-3Q3SY46 172 aa6.15□□□□□ -1.42
CDKL1-201ENST00000216378 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.43
CDKL1-201ENST00000216378 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
CDKL1-201ENST00000216378 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
CDKL1-201ENST00000216378 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
CDKL1-201ENST00000216378 IGKV2D-30A0A075B6S6 120 aa6.1□□□□□ -1.43
CDKL1-201ENST00000216378 IGKV2-30P06310 120 aa6.1□□□□□ -1.43
CDKL1-201ENST00000216378 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
CDKL1-201ENST00000216378 MUC17Q685J3 4493 aa6.06□□□□□ -1.44
CDKL1-201ENST00000216378 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
CDKL1-201ENST00000216378 FAT4Q6V0I7 4981 aa6.06□□□□□ -1.44
CDKL1-201ENST00000216378 H0YAA0 97 aa6.06□□□□□ -1.44
CDKL1-201ENST00000216378 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
CDKL1-201ENST00000216378 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CDKL1-201ENST00000216378 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
CDKL1-201ENST00000216378 K7ERS5 55 aa6.02□□□□□ -1.45
CDKL1-201ENST00000216378 XP32Q5T750 250 aa6.02□□□□□ -1.45
CDKL1-201ENST00000216378 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
CDKL1-201ENST00000216378 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
CDKL1-201ENST00000216378 A0A1B0GU33 70 aa5.84□□□□□ -1.47
CDKL1-201ENST00000216378 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
CDKL1-201ENST00000216378 H1FX-AS1Q4G0G2 97 aa5.82□□□□□ -1.48
CDKL1-201ENST00000216378 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
CDKL1-201ENST00000216378 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
CDKL1-201ENST00000216378 FLGP20930 4061 aaPredicted RBP5.75□□□□□ -1.49
CDKL1-201ENST00000216378 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
CDKL1-201ENST00000216378 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.69□□□□□ -1.5
CDKL1-201ENST00000216378 KRTAP9-2Q9BYQ4 174 aa5.68□□□□□ -1.5
CDKL1-201ENST00000216378 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
CDKL1-201ENST00000216378 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.5
CDKL1-201ENST00000216378 MT1HP80294 61 aa5.6□□□□□ -1.51
CDKL1-201ENST00000216378 CAMK2N1Q7Z7J9 78 aa5.54□□□□□ -1.52
CDKL1-201ENST00000216378 S4R3F8 94 aa5.54□□□□□ -1.52
CDKL1-201ENST00000216378 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
CDKL1-201ENST00000216378 FSIP2Q5CZC0 6907 aa5.47□□□□□ -1.53
CDKL1-201ENST00000216378 KRTAP4-12Q9BQ66 201 aa5.46□□□□□ -1.54
CDKL1-201ENST00000216378 M0R2T5 61 aa5.44□□□□□ -1.54
CDKL1-201ENST00000216378 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
CDKL1-201ENST00000216378 KRTAP10-6P60371 365 aaPredicted RBP5.43□□□□□ -1.54
CDKL1-201ENST00000216378 PLAC4Q8WY50 150 aa5.4□□□□□ -1.54
CDKL1-201ENST00000216378 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
CDKL1-201ENST00000216378 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
CDKL1-201ENST00000216378 A0A0D9SG42 100 aa5.4□□□□□ -1.55
CDKL1-201ENST00000216378 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
CDKL1-201ENST00000216378 KRTAP9-8Q9BYQ0 159 aa5.36□□□□□ -1.55
CDKL1-201ENST00000216378 USH2AO75445 5202 aa5.34□□□□□ -1.55
CDKL1-201ENST00000216378 KRTAP12-2P59991 146 aa5.32□□□□□ -1.56
CDKL1-201ENST00000216378 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
CDKL1-201ENST00000216378 MT2AP02795 61 aa5.29□□□□□ -1.56
CDKL1-201ENST00000216378 MT1FP04733 61 aa5.28□□□□□ -1.56
CDKL1-201ENST00000216378 KRTAP19-1Q8IUB9 90 aa5.27□□□□□ -1.57
CDKL1-201ENST00000216378 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CDKL1-201ENST00000216378 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.57
CDKL1-201ENST00000216378 SSPOA2VEC9 5147 aa5.19□□□□□ -1.58
CDKL1-201ENST00000216378 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
CDKL1-201ENST00000216378 M0QZ58 72 aa5.17□□□□□ -1.58
CDKL1-201ENST00000216378 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
CDKL1-201ENST00000216378 LCE1DQ5T752 114 aa5.15□□□□□ -1.58
CDKL1-201ENST00000216378 R4GN34 69 aa5.13□□□□□ -1.59
CDKL1-201ENST00000216378 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
CDKL1-201ENST00000216378 INE1O15225 51 aa5.03□□□□□ -1.6
CDKL1-201ENST00000216378 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
CDKL1-201ENST00000216378 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
CDKL1-201ENST00000216378 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CDKL1-201ENST00000216378 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
CDKL1-201ENST00000216378 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
CDKL1-201ENST00000216378 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
CDKL1-201ENST00000216378 MT1BP07438 61 aa4.89□□□□□ -1.63
CDKL1-201ENST00000216378 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
CDKL1-201ENST00000216378 MACF1Q9UPN3 7388 aaKnown RBP4.84□□□□□ -1.64
CDKL1-201ENST00000216378 KRTAP19-8Q3LI54 63 aa4.84□□□□□ -1.64
CDKL1-201ENST00000216378 KRTAP4-11Q9BYQ6 195 aa4.81□□□□□ -1.64
CDKL1-201ENST00000216378 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
CDKL1-201ENST00000216378 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
CDKL1-201ENST00000216378 KMT2DO14686 5537 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms