RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 SPATA8Q6RVD6 105 aa8.1□□□□□ -1.11
CBX6-201ENST00000216083 UQCR11O14957 56 aa8.09□□□□□ -1.11
CBX6-201ENST00000216083 MT1HL1P0DM35 61 aa8.08□□□□□ -1.12
CBX6-201ENST00000216083 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
CBX6-201ENST00000216083 KRTAP16-1A8MUX0 517 aa8.08□□□□□ -1.12
CBX6-201ENST00000216083 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
CBX6-201ENST00000216083 HERC2O95714 4834 aa8.06□□□□□ -1.12
CBX6-201ENST00000216083 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
CBX6-201ENST00000216083 LPAP08519 4548 aa7.9□□□□□ -1.15
CBX6-201ENST00000216083 PCLOQ9Y6V0 5065 aa7.85□□□□□ -1.15
CBX6-201ENST00000216083 A8MUU9 505 aa7.85□□□□□ -1.15
CBX6-201ENST00000216083 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
CBX6-201ENST00000216083 LRP2P98164 4655 aa7.84□□□□□ -1.15
CBX6-201ENST00000216083 J3QL48 77 aa7.82□□□□□ -1.16
CBX6-201ENST00000216083 H0YAA0 97 aa7.81□□□□□ -1.16
CBX6-201ENST00000216083 XP32Q5T750 250 aa7.79□□□□□ -1.16
CBX6-201ENST00000216083 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.16
CBX6-201ENST00000216083 ROMO1P60602 79 aa7.77□□□□□ -1.17
CBX6-201ENST00000216083 HERC1Q15751 4861 aa7.76□□□□□ -1.17
CBX6-201ENST00000216083 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.18
CBX6-201ENST00000216083 A0A1B0GU33 70 aa7.67□□□□□ -1.18
CBX6-201ENST00000216083 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
CBX6-201ENST00000216083 P0C880 135 aa7.65□□□□□ -1.18
CBX6-201ENST00000216083 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
CBX6-201ENST00000216083 A0A0D9SG42 100 aa7.55□□□□□ -1.2
CBX6-201ENST00000216083 SPINT4Q6UDR6 99 aa7.55□□□□□ -1.2
CBX6-201ENST00000216083 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
CBX6-201ENST00000216083 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
CBX6-201ENST00000216083 C10orf95Q9H7T3 257 aa7.52□□□□□ -1.21
CBX6-201ENST00000216083 MUC2Q02817 5179 aa7.5□□□□□ -1.21
CBX6-201ENST00000216083 SEC61BP60468 96 aaKnown RBP7.49□□□□□ -1.21
CBX6-201ENST00000216083 K7ERS5 55 aa7.49□□□□□ -1.21
CBX6-201ENST00000216083 COX6B2Q6YFQ2 88 aa7.48□□□□□ -1.21
CBX6-201ENST00000216083 LUZP6Q538Z0 58 aa7.45□□□□□ -1.22
CBX6-201ENST00000216083 NDUFAF8A1L188 74 aa7.44□□□□□ -1.22
CBX6-201ENST00000216083 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
CBX6-201ENST00000216083 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
CBX6-201ENST00000216083 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
CBX6-201ENST00000216083 UBR4Q5T4S7 5183 aa7.32□□□□□ -1.24
CBX6-201ENST00000216083 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
CBX6-201ENST00000216083 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
CBX6-201ENST00000216083 S4R3F8 94 aa7.23□□□□□ -1.25
CBX6-201ENST00000216083 KRTAP10-6P60371 365 aaPredicted RBP7.22□□□□□ -1.25
CBX6-201ENST00000216083 FAT4Q6V0I7 4981 aa7.18□□□□□ -1.26
CBX6-201ENST00000216083 KRTAP15-1Q3LI76 137 aa7.17□□□□□ -1.26
CBX6-201ENST00000216083 KRTAP12-2P59991 146 aa7.14□□□□□ -1.27
CBX6-201ENST00000216083 KRTAP19-2Q3LHN2 52 aa7.14□□□□□ -1.27
CBX6-201ENST00000216083 KRTAP3-2Q9BYR7 98 aa7.11□□□□□ -1.27
CBX6-201ENST00000216083 FLGP20930 4061 aaPredicted RBP7.05□□□□□ -1.28
CBX6-201ENST00000216083 KRTAP12-1P59990 96 aa6.96□□□□□ -1.3
CBX6-201ENST00000216083 LCE2CQ5TA81 110 aa6.96□□□□□ -1.3
CBX6-201ENST00000216083 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
CBX6-201ENST00000216083 M0R2T5 61 aa6.81□□□□□ -1.32
CBX6-201ENST00000216083 MT1HP80294 61 aa6.81□□□□□ -1.32
CBX6-201ENST00000216083 M0QZ58 72 aa6.72□□□□□ -1.33
CBX6-201ENST00000216083 PLAC4Q8WY50 150 aa6.71□□□□□ -1.33
CBX6-201ENST00000216083 R4GN34 69 aa6.69□□□□□ -1.34
CBX6-201ENST00000216083 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
CBX6-201ENST00000216083 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
CBX6-201ENST00000216083 MT2AP02795 61 aa6.56□□□□□ -1.36
CBX6-201ENST00000216083 MT1FP04733 61 aa6.56□□□□□ -1.36
CBX6-201ENST00000216083 KRTAP10-10P60014 251 aa6.53□□□□□ -1.36
CBX6-201ENST00000216083 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
CBX6-201ENST00000216083 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
CBX6-201ENST00000216083 SPRR2GQ9BYE4 73 aa6.39□□□□□ -1.39
CBX6-201ENST00000216083 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
CBX6-201ENST00000216083 USH2AO75445 5202 aa6.28□□□□□ -1.4
CBX6-201ENST00000216083 MT1BP07438 61 aa6.2□□□□□ -1.42
CBX6-201ENST00000216083 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
CBX6-201ENST00000216083 LCE2BO14633 110 aa6.18□□□□□ -1.42
CBX6-201ENST00000216083 PP632Q6XCG6 107 aa6.17□□□□□ -1.42
CBX6-201ENST00000216083 PRO2289Q9P1D8 64 aa6.16□□□□□ -1.42
CBX6-201ENST00000216083 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
CBX6-201ENST00000216083 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
CBX6-201ENST00000216083 TNP1P09430 55 aa6.06□□□□□ -1.44
CBX6-201ENST00000216083 MT1XP80297 61 aa6.02□□□□□ -1.45
CBX6-201ENST00000216083 KRTAP10-5P60370 271 aa6□□□□□ -1.45
CBX6-201ENST00000216083 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
CBX6-201ENST00000216083 SPRR5A0A1B0GTR4 108 aa5.92□□□□□ -1.46
CBX6-201ENST00000216083 KMT2DO14686 5537 aa5.86□□□□□ -1.47
CBX6-201ENST00000216083 KRTAP10-7P60409 375 aaPredicted RBP5.84□□□□□ -1.47
CBX6-201ENST00000216083 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
CBX6-201ENST00000216083 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.49
CBX6-201ENST00000216083 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
CBX6-201ENST00000216083 INE1O15225 51 aa5.67□□□□□ -1.5
CBX6-201ENST00000216083 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
CBX6-201ENST00000216083 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
CBX6-201ENST00000216083 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
CBX6-201ENST00000216083 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
CBX6-201ENST00000216083 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
CBX6-201ENST00000216083 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
CBX6-201ENST00000216083 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
CBX6-201ENST00000216083 KRTAP19-5Q3LI72 72 aa5.48□□□□□ -1.53
CBX6-201ENST00000216083 MACF1Q9UPN3 7388 aaKnown RBP5.45□□□□□ -1.54
CBX6-201ENST00000216083 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
CBX6-201ENST00000216083 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
CBX6-201ENST00000216083 SYNE2Q8WXH0 6885 aaKnown RBP5.36□□□□□ -1.55
CBX6-201ENST00000216083 MUC12Q9UKN1 5478 aa5.35□□□□□ -1.55
CBX6-201ENST00000216083 MT1EP04732 61 aa5.24□□□□□ -1.57
CBX6-201ENST00000216083 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms