RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 C9orf92A6NGG3 77 aa5.52□□□□□ -1.53
RTCB-201ENST00000216038 LRP2P98164 4655 aa5.51□□□□□ -1.53
RTCB-201ENST00000216038 A0A1B0GVX0 72 aa5.51□□□□□ -1.53
RTCB-201ENST00000216038 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
RTCB-201ENST00000216038 NOTCH2NLQ7Z3S9 236 aa5.5□□□□□ -1.53
RTCB-201ENST00000216038 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
RTCB-201ENST00000216038 DMAC1Q96GE9 116 aa5.49□□□□□ -1.53
RTCB-201ENST00000216038 KRTAP13-3Q3SY46 172 aa5.46□□□□□ -1.54
RTCB-201ENST00000216038 CSAG1Q6PB30 78 aa5.46□□□□□ -1.54
RTCB-201ENST00000216038 TPRXLQ17RH7 258 aa5.43□□□□□ -1.54
RTCB-201ENST00000216038 XP32Q5T750 250 aa5.4□□□□□ -1.54
RTCB-201ENST00000216038 KRTAP16-1A8MUX0 517 aa5.4□□□□□ -1.55
RTCB-201ENST00000216038 UBR4Q5T4S7 5183 aa5.39□□□□□ -1.55
RTCB-201ENST00000216038 Q5W150 140 aa5.38□□□□□ -1.55
RTCB-201ENST00000216038 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
RTCB-201ENST00000216038 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
RTCB-201ENST00000216038 ROMO1P60602 79 aa5.36□□□□□ -1.55
RTCB-201ENST00000216038 MUC2Q02817 5179 aa5.35□□□□□ -1.55
RTCB-201ENST00000216038 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
RTCB-201ENST00000216038 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
RTCB-201ENST00000216038 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
RTCB-201ENST00000216038 A8MUU9 505 aa5.33□□□□□ -1.56
RTCB-201ENST00000216038 RPL37P61927 97 aaKnown RBP5.31□□□□□ -1.56
RTCB-201ENST00000216038 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
RTCB-201ENST00000216038 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
RTCB-201ENST00000216038 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
RTCB-201ENST00000216038 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
RTCB-201ENST00000216038 KRTAP4-1Q9BYQ7 146 aa5.21□□□□□ -1.58
RTCB-201ENST00000216038 H0YAA0 97 aa5.16□□□□□ -1.58
RTCB-201ENST00000216038 K7ERS5 55 aa5.14□□□□□ -1.59
RTCB-201ENST00000216038 P0C880 135 aa5.13□□□□□ -1.59
RTCB-201ENST00000216038 A0A1B0GU33 70 aa5.11□□□□□ -1.59
RTCB-201ENST00000216038 FAT4Q6V0I7 4981 aa5.11□□□□□ -1.59
RTCB-201ENST00000216038 H1FX-AS1Q4G0G2 97 aa5.07□□□□□ -1.6
RTCB-201ENST00000216038 KRTAP19-2Q3LHN2 52 aa5.01□□□□□ -1.61
RTCB-201ENST00000216038 COX6B2Q6YFQ2 88 aa5.01□□□□□ -1.61
RTCB-201ENST00000216038 SPINT4Q6UDR6 99 aa4.99□□□□□ -1.61
RTCB-201ENST00000216038 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
RTCB-201ENST00000216038 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
RTCB-201ENST00000216038 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
RTCB-201ENST00000216038 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
RTCB-201ENST00000216038 CRIPTQ9P021 101 aa4.94□□□□□ -1.62
RTCB-201ENST00000216038 NDUFAF8A1L188 74 aa4.92□□□□□ -1.62
RTCB-201ENST00000216038 A0A0A0MQY5 61 aa4.88□□□□□ -1.63
RTCB-201ENST00000216038 MT1HP80294 61 aa4.88□□□□□ -1.63
RTCB-201ENST00000216038 M0R2T5 61 aa4.85□□□□□ -1.63
RTCB-201ENST00000216038 S4R3F8 94 aa4.85□□□□□ -1.63
RTCB-201ENST00000216038 LCE2AQ5TA79 106 aaPredicted RBP4.8□□□□□ -1.64
RTCB-201ENST00000216038 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
RTCB-201ENST00000216038 C10orf95Q9H7T3 257 aa4.73□□□□□ -1.65
RTCB-201ENST00000216038 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
RTCB-201ENST00000216038 A0A0D9SG42 100 aa4.7□□□□□ -1.66
RTCB-201ENST00000216038 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
RTCB-201ENST00000216038 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
RTCB-201ENST00000216038 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
RTCB-201ENST00000216038 MT2AP02795 61 aa4.65□□□□□ -1.67
RTCB-201ENST00000216038 LCE2BO14633 110 aa4.63□□□□□ -1.67
RTCB-201ENST00000216038 MT1FP04733 61 aa4.62□□□□□ -1.67
RTCB-201ENST00000216038 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
RTCB-201ENST00000216038 KRTAP12-2P59991 146 aa4.62□□□□□ -1.67
RTCB-201ENST00000216038 KRTAP12-1P59990 96 aa4.6□□□□□ -1.67
RTCB-201ENST00000216038 M0QZ58 72 aa4.56□□□□□ -1.68
RTCB-201ENST00000216038 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
RTCB-201ENST00000216038 FSIP2Q5CZC0 6907 aa4.5□□□□□ -1.69
RTCB-201ENST00000216038 KRTAP9-3Q9BYQ3 159 aa4.5□□□□□ -1.69
RTCB-201ENST00000216038 USH2AO75445 5202 aa4.48□□□□□ -1.69
RTCB-201ENST00000216038 R4GN34 69 aa4.48□□□□□ -1.69
RTCB-201ENST00000216038 KRTAP19-1Q8IUB9 90 aa4.46□□□□□ -1.69
RTCB-201ENST00000216038 SPRR2GQ9BYE4 73 aa4.43□□□□□ -1.7
RTCB-201ENST00000216038 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
RTCB-201ENST00000216038 KRTAP9-2Q9BYQ4 174 aa4.38□□□□□ -1.71
RTCB-201ENST00000216038 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
RTCB-201ENST00000216038 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
RTCB-201ENST00000216038 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
RTCB-201ENST00000216038 MT1BP07438 61 aa4.32□□□□□ -1.72
RTCB-201ENST00000216038 SPRR5A0A1B0GTR4 108 aa4.22□□□□□ -1.73
RTCB-201ENST00000216038 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
RTCB-201ENST00000216038 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
RTCB-201ENST00000216038 CRCT1Q9UGL9 99 aa4.19□□□□□ -1.74
RTCB-201ENST00000216038 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
RTCB-201ENST00000216038 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
RTCB-201ENST00000216038 MT1XP80297 61 aa4.14□□□□□ -1.75
RTCB-201ENST00000216038 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
RTCB-201ENST00000216038 INE1O15225 51 aa4.11□□□□□ -1.75
RTCB-201ENST00000216038 KRTAP9-6A0A140TA67 174 aa4.09□□□□□ -1.75
RTCB-201ENST00000216038 KMT2DO14686 5537 aa4.05□□□□□ -1.76
RTCB-201ENST00000216038 TNP1P09430 55 aa4.05□□□□□ -1.76
RTCB-201ENST00000216038 MACF1Q9UPN3 7388 aaKnown RBP4.02□□□□□ -1.77
RTCB-201ENST00000216038 KRTAP10-7P60409 375 aaPredicted RBP3.99□□□□□ -1.77
RTCB-201ENST00000216038 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
RTCB-201ENST00000216038 KRTAP10-12P60413 245 aa3.91□□□□□ -1.78
RTCB-201ENST00000216038 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
RTCB-201ENST00000216038 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
RTCB-201ENST00000216038 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
RTCB-201ENST00000216038 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
RTCB-201ENST00000216038 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
RTCB-201ENST00000216038 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
RTCB-201ENST00000216038 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
RTCB-201ENST00000216038 KRTAP9-7A8MTY7 169 aa3.73□□□□□ -1.81
RTCB-201ENST00000216038 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms