RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 PpbpQ9EQI5 113 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Ighv1-23A0A0A6YVW3 117 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Adrb3P25962 400 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Timm8bP62077 83 aaKnown RBP18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Olfr1209Q3SXJ3 310 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Gm94Q3V2D2 93 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Tctex1d1Q9D5I4 173 aa18.46■□□□□ 0.55
Ubp1-203ENSMUST00000116492 Scgb1b11A0A087WQJ0 93 aa18.45■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Q24JP4 165 aa18.45■□□□□ 0.54
Ubp1-203ENSMUST00000116492 SNORCQ9CXL7 121 aa18.45■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Esp38A8R0X1 80 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Zfp493E9Q1L8 384 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 P01820 115 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Fmc1Q9CR13 113 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Igkv4-81A0A0G2JEY5 119 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Kmt2bO08550 2713 aa18.44■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Arl3Q9WUL7 182 aa18.43■□□□□ 0.54
Ubp1-203ENSMUST00000116492 P01756 117 aa18.43■□□□□ 0.54
Ubp1-203ENSMUST00000116492 P01757 117 aa18.43■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Card19Q9D1I2 183 aa18.43■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Trav19A0A0B4J1K4 119 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Ighv9-1A0A0B4J1P3 117 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Ins2P01326 110 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Znf787Q8BIF9 381 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Hyls1Q9CXX0 307 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Klf13Q9JJZ6 289 aa18.42■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Omt2bD3YX29 119 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 NrgnP60761 78 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Cox7a2lQ61387 111 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Isg15Q64339 161 aaKnown RBP18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Samd10Q7TST3 202 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Tcte2E9PY37 120 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Pla2g2aP31482 146 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Rnf185Q91YT2 192 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Dpm3Q9D1Q4 92 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 RhohQ9D3G9 191 aa18.41■□□□□ 0.54
Ubp1-203ENSMUST00000116492 1700067P10RikG3X8U2 183 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Psmg4P0C7N9 123 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Khdc1aQ3UWR2 166 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Zfp248Q640N4 576 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Taf15Q8BQ46 557 aaKnown RBP18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 D630044L22RikQ8C701 164 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 5730522E02RikQ5SP45 163 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Psmb11Q8BG41 302 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 NpbQ8K4P1 119 aa18.4■□□□□ 0.54
Ubp1-203ENSMUST00000116492 Sptbn1Q62261 2363 aaKnown RBP18.39■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Tnfrsf9P20334 256 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 PdpnQ62011 172 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Spink2Q8BMY7 86 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Q9DAA3 117 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Trav6n-6A0A075B6B2 114 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 1520401A03RikA0A0J9YVH6 598 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Zfp109A0A0U1RPC5 652 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 H2-DMb1P35737 261 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Cited1P97769 203 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Olfr1437Q7TQR7 312 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Klk15Q8CGR4 254 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Znf580Q9DB38 172 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Tax1bp3Q9DBG9 124 aa18.38■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Gm17455G3UW87 128 aa18.37■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Cox8bP48772 70 aa18.37■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Med13lQ6JPI3 2207 aa18.37■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Q9D131 166 aa18.37■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Csmd2V9GX34 3611 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Edn2P22389 175 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Map1lc3aQ91VR7 121 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Tomm6Q9CQN3 74 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Q9DAB9 146 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Rabac1Q9Z0S9 185 aa18.36■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Gm5157A0A087WRH8 301 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Gm28305F6U473 122 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Gm28038F7BCN9 126 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Tppp3Q9CRB6 176 aaKnown RBP18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Svep1A2AVA0 3567 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Itpr3P70227 2670 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Ighv1-80A0A075B5Y3 117 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Sprr3O09116 238 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Smad7O35253 426 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Gm1968Q3T9I3 115 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Odf1Q61999 247 aa18.35■□□□□ 0.53
Ubp1-203ENSMUST00000116492 AcacbE9Q4Z2 2448 aa18.34■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Igkv4-57-1A0A075B5M4 119 aa18.34■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Tmem8bB1AWJ5 472 aa18.34■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Nit2Q9JHW2 276 aa18.34■□□□□ 0.53
Ubp1-203ENSMUST00000116492 Ighv8-4A0A0A6YW26 117 aa18.33■□□□□ 0.52
Ubp1-203ENSMUST00000116492 P01643 108 aa18.33■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Usmg5Q78IK2 58 aa18.33■□□□□ 0.52
Ubp1-203ENSMUST00000116492 PdfS4R2K0 231 aa18.33■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Fhl1P97447 280 aaKnown RBP18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ang6Q5GAN0 147 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Lelp1Q9DAE3 120 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Gm26938S4R185 226 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Igkv4-70A0A0B4J1I5 116 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 BlcapP62951 87 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 TctaQ8VEA7 122 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Mrpl20Q9CQL4 149 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Lamtor2Q9JHS3 125 aa18.32■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Ighv1-82A0A0G2JEU7 117 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 A0A1Y7VMQ4 148 aa18.31■□□□□ 0.52
Ubp1-203ENSMUST00000116492 Nat8f4G5E8L3 226 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 107.7 ms