RNA–Protein interactions for RNA: ENSMUST00000058579.6

Ddx28-201, Transcript of Probable ATP-dependent RNA helicase DDX28, mousemouse

APPRIS P1 BASIC

Gene Ddx28, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28-201ENSMUST00000058579 Tmem141A2AJB2 108 aa13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Zfand3Q497H0 227 aa13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Srsf2Q62093 221 aaKnown RBP13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Olfr1437Q7TQR7 312 aa13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Fmc1Q9CR13 113 aa13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Hspb8Q9JK92 196 aa13.35□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Tcrg-V6A0A075B5Y8 134 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Emp2O88662 172 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 NpsP0C0P8 89 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Klk15Q8CGR4 254 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Q9CX25 107 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 ManfQ9CXI5 179 aaKnown RBP13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Ighv3-1A0A075B5S6 116 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Gm15293D3YX02 93 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 BC107364E9Q5A2 140 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Smad7O35253 426 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Psmg4P0C7N9 123 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Defb33Q30KN3 62 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 7420426K07RikQ3UX66 186 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Gm5941Q497P9 117 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Wfdc21Q8BTE6 63 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Gm5105Q8C6Y9 112 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Map1lc3aQ91VR7 121 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Pgpep1lQ9CWB5 130 aa13.34□□□□□ -0.27
Ddx28-201ENSMUST00000058579 Igkv4-90A0A075B5L3 117 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ighv6-7A0A0A6YWU3 119 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Cd24P24807 76 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm5150Q1AN92 299 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Josd1Q9DBJ6 202 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ighv8-8A0A0A6YXQ0 119 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 H2-DMb1P35737 261 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ndufa4l2Q4FZG9 87 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Vwc2lQ505H4 222 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 FshbQ60687 130 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 G0s2Q61585 103 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Hoxc12Q8K5B8 280 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Vmn1r197Q8R265 298 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Atp6v0e1Q9CQD8 81 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Dkk2Q9QYZ8 259 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Bub3Q9WVA3 326 aa13.33□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Cep250Q60952 2414 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Zfp493E9Q1L8 384 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 AW146154Q3TPQ7 468 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 MycbQ6P8Z1 170 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ndufc2Q9CQ54 120 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Cmya5Q70KF4 3739 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Pla2g2cP48076 150 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm10604Q3V0X7 143 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Slc35d2Q762D5 326 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Prr23a3Q9CWP9 254 aa13.32□□□□□ -0.28
Ddx28-201ENSMUST00000058579 AcacbE9Q4Z2 2448 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Trav14-2A0A075B694 121 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm17359A0A0G2JEB7 487 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Defb30Q30KN4 75 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Q3UNZ8 350 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Crip3Q6Q6R3 243 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 PpdpfQ9CR37 115 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Lrrk2Q5S006 2527 aa13.31□□□□□ -0.28
Ddx28-201ENSMUST00000058579 1520401A03RikA0A0J9YVH6 598 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Smim13E9Q942 88 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm9970F6ZED4 185 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Khdc1aQ3UWR2 166 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Pkd1l2Q7TN88 2461 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 SstP60041 116 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Tmem136Q3TYE7 245 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Tmem88bQ3TYP4 173 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ndufa11Q9D8B4 141 aa13.3□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Trav21-dv12A0A075B6C4 109 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Trav7-5A0A0G2JFX6 112 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gosr1O88630 250 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Defa9P50707 93 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Foxc2Q61850 494 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ighv1-23A0A0A6YVW3 117 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Igkv4-59A0A0B4J1I8 117 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Tnfrsf9P20334 256 aa13.29□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm17727E9Q4V7 109 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm26727M0QWT1 121 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ins1P01325 108 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Olfr1209Q3SXJ3 310 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Spint3Q3UW09 88 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Hspe1Q64433 102 aaKnown RBP13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Il22ra1Q80XZ4 581 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Wfdc2Q9DAU7 174 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Slc25a20Q9Z2Z6 301 aaKnown RBP13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Trav19A0A0B4J1K4 119 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Igkv4-81A0A0G2JEY5 119 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Sertad4A7DTG3 377 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm5878E9PUB3 99 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm28038F7BCN9 126 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ly6lH3BJG9 140 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 PlnP61014 52 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Rbfox3Q8BIF2 374 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 F930015N05RikQ8C3A3 210 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ube2tQ9CQ37 204 aa13.28□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ash1lQ99MY8 2958 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ighv1-4A0A075B5T4 117 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Ighv1-53A0A075B5W3 117 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Gm10036E9PYL9 178 aaKnown RBP13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 Vsig4F6TUL9 280 aa13.27□□□□□ -0.28
Ddx28-201ENSMUST00000058579 A130051J06RikQ8CAU1 227 aa13.27□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms