RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pkd1l2Q7TN88 2461 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm29289A0A087WPY7 166 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm4064A0A087WR82 380 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Trav7-5A0A0G2JFX6 112 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm10352B2RWR6 380 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm17430F6RSK3 157 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Gm21693J3QK27 380 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Fam240aJ3QNP9 97 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Rbmy1a1O35698 380 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Olfr553Q7TRS6 326 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Fam24aQ8CF27 98 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Shisal2aA2A9G7 189 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 9230109A22RikQ8BHE6 111 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Rasl11bQ922H7 247 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Q9D727 114 aa7.65□□□□□ -1.18
Pcdh1-201ENSMUST00000057185 Tstd1E9PY03 133 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Hoxb4P10284 250 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm12689Q8BQU9 117 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Pygo1Q9D0P5 417 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 AY761184Q9D848 116 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 CompQ9R0G6 755 aa7.65□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm6871L7N248 545 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr745Q7TRL9 328 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Fam216bQ8CC14 138 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr477Q8VGI6 310 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cnn3Q9DAW9 330 aaKnown RBP7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm2174F6ZVF2 133 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr810Q8VFH9 312 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Josd1Q9DBJ6 202 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Slc25a20Q9Z2Z6 301 aaKnown RBP7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav6-6A0A075B603 114 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav6n-6A0A075B6B2 114 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Nxph4G3X9N5 304 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr498Q8VEW2 330 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr976Q8VF15 326 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Atxn7l1Q9CZ05 146 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 IcosQ9WVS0 200 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Rs1Q9Z1L4 224 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Wnk1P83741 2377 aa7.64□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav14n-2A0A0G2JDF5 121 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tmem8bB1AWJ5 472 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 PspnO70300 156 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ins2P01326 110 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Vmn1r197Q8R265 298 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Q9DAZ5 108 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm884A2A9H6 3643 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Rpl13aP19253 203 aaKnown RBP7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Atp6v0e1Q9CQD8 81 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cd27P41272 250 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Mrps21P58059 87 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr904Q7TRC9 310 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm9958Q8C9U4 106 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cysrt1Q9D1E4 142 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm15294V9GXA7 121 aa7.63□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav19A0A0B4J1K4 119 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Csn3P06796 181 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Defb30Q30KN4 75 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Lce6aD3YV94 81 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Omt2bD3YX29 119 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gpx1P11352 201 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cox8bP48772 70 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ang2Q64438 145 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gkn1Q9CR36 201 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Igkv4-81A0A0G2JEY5 119 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Cdx4Q07424 282 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tmem40Q4FJU9 225 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Q4KKZ1 196 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gpx7Q99LJ6 186 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Plekhb2Q9QZC7 221 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ttc28Q80XJ3 2450 aa7.62□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav16d-dv11A0A075B617 117 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Smad7O35253 426 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 P01801 115 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Spata46Q4FZF2 204 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ccl12Q62401 104 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Pxt1Q8K459 51 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Bhlha15Q9QYC3 197 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Muc5acE9QAQ8 3455 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Bahcc1Q3UHR0 2643 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Amn1B8JKV0 258 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 P01794 123 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 NdpP48744 131 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Q5BN45 167 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trav7-2Q5R1I3 112 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Spock3Q8BKV0 436 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 TctaQ8VEA7 122 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Fbxl15Q91W61 300 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Sec11aQ9R0P6 179 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 TrrapQ80YV3 2565 aaKnown RBP7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Usp9xP70398 2559 aaKnown RBP7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Trbv17A0A140T8P8 114 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tmem238lA0A1B0GS74 79 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Tex48Q9DA81 110 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Zfhx4Q9JJN2 3550 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Hivep2Q3UHF7 2430 aa7.61□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ighv5-6A0A075B5Q0 117 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Ighv1-62-2A0A0A6YXZ4 119 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Gm15217A2CG07 155 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Esp4A8R0T8 117 aa7.6□□□□□ -1.19
Pcdh1-201ENSMUST00000057185 Olfr975Q8VG91 310 aa7.6□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms