RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gm28778A0A087WSK7 233 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 P01726 129 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 NpyP57774 97 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Spock3Q8BKV0 436 aa8.56□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tcrg-V6A0A075B5Y8 134 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm29423A0A087WRM1 55 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm12830F6XVH0 157 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Oosp2Q4FZG8 168 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Prima1Q810F0 153 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ramp1Q9WTJ5 148 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Igkv4-91A0A075B5L2 119 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tmem238lA0A1B0GS74 79 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Defa23Q5G866 93 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Fmc1Q9CR13 113 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Nup37Q9CWU9 326 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ash1lQ99MY8 2958 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Igkv2-137A0A0B4J1H6 120 aa8.55□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ptpn13Q64512 2453 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tns1E9Q0S6 1888 aaKnown RBP8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ighv14-2A0A075B5R7 117 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Cdx4Q07424 282 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Igkv4-90A0A075B5L3 117 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ighv3-8A0A075B5T0 131 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ighv5-12-4A0A0A6YWG4 117 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Mllt11P97783 90 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav7d-3Q5R1I1 112 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 QrfpQ8CE23 124 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Mrpl53Q9D1H8 118 aaKnown RBP8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tcf20Q9EPQ8 1987 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm15128A2ADW8 449 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 P01896 185 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 P06330 118 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Hoxb2P0C1T1 354 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Fbxl15Q91W61 300 aa8.54□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav14-3A0A075B607 120 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Znf385cA2A5E6 429 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm10118Q8C8J5 116 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 LbhQ9CX60 105 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Necap2Q9D1J1 266 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Avpi1Q9D7H4 142 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Plac1Q9JI83 173 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tomm40Q9QYA2 361 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Myo18bE9PV66 2605 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trav6-6A0A075B603 114 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm45521A0A1B0GRK0 198 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Rnf212F6TQD1 307 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Nxph4G3X9N5 304 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tdgf1P51865 171 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm9949Q8C9F4 104 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 PpdpfQ9CR37 115 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ociad2Q9D8W7 154 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Ankhd1E9PUR0 2548 aaKnown RBP8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trbv14A0A140T8L9 115 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm17455G3UW87 128 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 P01741 114 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Srsf7Q8BL97 267 aaKnown RBP8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm9944Q8C559 102 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Rnf125Q9D9R0 233 aa8.53□□□□□ -1.04
Rnf40-201ENSMUST00000033088 KalrnA2CG49 2964 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Trbv13-1A0A0B4J1P8 112 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Igkv14-111A0A140T8P9 117 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 CckP09240 115 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Olfr322Q5NCC8 327 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Olfr317Q5NCD6 327 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Muc15Q8C6Z1 331 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Bles03Q8VD62 251 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Tmem167aQ9CR64 72 aa8.52□□□□□ -1.04
Rnf40-201ENSMUST00000033088 Gm29666A0A087WQ99 126 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 2310009B15RikA0A0A6YWI4 143 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P01674 108 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Cox8bP48772 70 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 AmelxP63277 210 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Mrpl36Q99N90 102 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Crip1P63254 77 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Pygo2Q80V76 405 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Gm9961Q8BNV2 113 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Spag11Q8K4N2 71 aa8.52□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Prp2P05143 317 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 RbpjP31266 526 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Znf740Q6NZQ6 180 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Timm21Q8CCM6 249 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Oxld1Q9CR10 201 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 MtorQ9JLN9 2549 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ighv8-4A0A0A6YW26 117 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Dlx6P70397 175 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ndufa3Q9CQ91 84 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Ss18l2Q9D174 77 aa8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Prrc2aQ7TSC1 2158 aaKnown RBP8.51□□□□□ -1.05
Rnf40-201ENSMUST00000033088 3110021N24RikJ3QMN2 152 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P01801 115 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Defa7P50705 93 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Folr2Q05685 251 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 TdhQ8K3F7 373 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 AamdcQ8R0P4 122 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 PtprbB2RU80 1998 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 MycbQ6P8Z1 170 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Olfr1199Q8VF94 310 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Rab9aQ9R0M6 201 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 Wfdc11A2A5H7 82 aa8.5□□□□□ -1.05
Rnf40-201ENSMUST00000033088 P01655 112 aa8.5□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms