RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Gm17430F6RSK3 157 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Cd24P24807 76 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Gp9O88186 177 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Snrnp40Q6PE01 358 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Atp6v0e2Q91XE7 81 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 PoleQ9WVF7 2283 aa13.03□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Gosr1O88630 250 aa13.02□□□□□ -0.32
Ctcf-201ENSMUST00000005841 Ccl8Q9Z121 97 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm29289A0A087WPY7 166 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm4064A0A087WR82 380 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ighv1-69A0A0G2JFS5 117 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm10352B2RWR6 380 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm21693J3QK27 380 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Rbmy1a1O35698 380 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Olfr1243Q8VGM7 305 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 CntrlA2AL36 2334 aa13.02□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Igkv4-71A0A0G2JEH0 117 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Myod1P10085 318 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 AW146154Q3TPQ7 468 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Fmc1Q9CR13 113 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Lamtor5Q9D1L9 91 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gsx1P31315 261 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Rpl24Q8BP67 157 aaKnown RBP13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Tmem178aQ9CZ16 297 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm28038F7BCN9 126 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Map1lc3aQ91VR7 121 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Fxyd4Q9D2W0 88 aa13.01□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ighv1-23A0A0A6YVW3 117 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Shank1D3YZU1 2167 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ccl25O35903 144 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Fosl1P48755 273 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ube2d1P61080 147 aaKnown RBP13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 P18532 116 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ube2d3P61079 147 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ube2d2P62838 147 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Hint1P70349 126 aaKnown RBP13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 D630044L22RikQ8C701 164 aa13□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ighv1-77A0A0G2JGS9 117 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Olfr553Q7TRS6 326 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Defa-rs7P50715 91 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm26920S4R2A5 56 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 P01794 123 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm94Q3V2D2 93 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Prr13Q9CQJ5 137 aa12.99□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Igkv4-59A0A0B4J1I8 117 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Defb28Q3V2L0 89 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Muc4Q8JZM8 3443 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ighv8-5A0A0A6YY60 119 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Sh3bgrl2Q8BG73 107 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Olfr976Q8VF15 326 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Atxn7l1Q9CZ05 146 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 CklfQ9DAS1 152 aa12.98□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Igkv4-90A0A075B5L3 117 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Ighv1-55A0A075B5W6 117 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Trav7n-5A0A075B604 112 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Amn1B8JKV0 258 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 CrygbP04344 175 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Rbfox3Q8BIF2 374 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm5878E9PUB3 99 aa12.97□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Cxcl13O55038 109 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 P18527 97 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Cfc1P97766 202 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Klk5Q9D140 293 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 NacaP70670 2187 aaKnown RBP12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 1700056E22RikF7CNM6 234 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Insl3O09107 122 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gm5941Q497P9 117 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 3100002H09RikQ9CXW6 140 aa12.96□□□□□ -0.33
Ctcf-201ENSMUST00000005841 Gpx7Q99LJ6 186 aa12.96□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ighv7-4A0A0A6YXL5 121 aa12.95□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ighv1-4A0A075B5T4 117 aa12.95□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm5157A0A087WRH8 301 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 P01837 106 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm10295Q8CCF3 114 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Rab1bQ9D1G1 201 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 CadB2RQC6 2225 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Cks1bP61025 79 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Defa34D3Z0J0 93 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ssbp4Q3U4B1 363 aa12.94□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Esp38A8R0X1 80 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Map6d1Q14BB9 191 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Mex3bQ69Z36 601 aaKnown RBP12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 GlrxQ9QUH0 107 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Smrp1Q2MH31 260 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 9130230L23RikQ8CC80 163 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Rab9aQ9R0M6 201 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 NdpP48744 131 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Prss41Q920S2 322 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Q9CX63 252 aa12.93□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Med12A2AGH6 2190 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Trav8-1A0A075B641 109 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Dtx1Q61010 627 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ighv1-53A0A075B5W3 117 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm44965A0A0N4SVR3 59 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Ccl11P48298 97 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 A130051J06RikQ8CAU1 227 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm16223Q8CBM3 117 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Gm26938S4R185 226 aa12.92□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Samd10Q7TST3 202 aa12.91□□□□□ -0.34
Ctcf-201ENSMUST00000005841 Q9CQM1 111 aa12.91□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 105.4 ms