RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cep250Q60952 2414 aa14.47□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm5157A0A087WRH8 301 aa14.47□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Vwc2lQ505H4 222 aa14.47□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Igkv4-59A0A0B4J1I8 117 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 1520401A03RikA0A0J9YVH6 598 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Gm45521A0A1B0GRK0 198 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 H2-DMb1P35737 261 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Ndufa4l2Q4FZG9 87 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Vsig8Q6P3A4 417 aa14.46□□□□□ -0.09
Shkbp1-201ENSMUST00000003857 Zfp493E9Q1L8 384 aa14.46□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm45213A0A0U1RNZ6 101 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Psmg4P0C7N9 123 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm5150Q1AN92 299 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Map1lc3aQ91VR7 121 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 NpsP0C0P8 89 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 F930015N05RikQ8C3A3 210 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Hoxc12Q8K5B8 280 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Tex48Q9DA81 110 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Sec11aQ9R0P6 179 aa14.45□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv9-1A0A0B4J1P3 117 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Foxc2Q61850 494 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Spink2Q8BMY7 86 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Hspb8Q9JK92 196 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Trav14-2A0A075B694 121 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Defa30E9QPZ2 93 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Smad7O35253 426 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Cd24P24807 76 aa14.44□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv1-53A0A075B5W3 117 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Lce6aD3YV94 81 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm5878E9PUB3 99 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 1700056E22RikF7CNM6 234 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ube2e1P52482 193 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 MycbQ6P8Z1 170 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 A130051J06RikQ8CAU1 227 aa14.43□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv1-4A0A075B5T4 117 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv8-8A0A0A6YXQ0 119 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Defa6P50704 93 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Klk15Q8CGR4 254 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Klk10Q99M20 278 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv1-23A0A0A6YVW3 117 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Olfr1209Q3SXJ3 310 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ndufc2Q9CQ54 120 aa14.42□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Trav21-dv12A0A075B6C4 109 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Spint3Q3UW09 88 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Nbl1Q61477 178 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Odf3l1Q810P2 275 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Josd1Q9DBJ6 202 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Dkk2Q9QYZ8 259 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 ApomQ9Z1R3 190 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 BC107364E9Q5A2 140 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ly6lH3BJG9 140 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Khdc1aQ3UWR2 166 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm10604Q3V0X7 143 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Hspe1Q64433 102 aaKnown RBP14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 PpdpfQ9CR37 115 aa14.41□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ighv6-7A0A0A6YWU3 119 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gosr1O88630 250 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Q3UNZ8 350 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Vmn1r197Q8R265 298 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm17359A0A0G2JEB7 487 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Igkv4-81A0A0G2JEY5 119 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm17727E9Q4V7 109 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Gm28038F7BCN9 126 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 Ndufa11Q9D8B4 141 aa14.4□□□□□ -0.1
Shkbp1-201ENSMUST00000003857 CenpeQ6RT24 2474 aaKnown RBP14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Trav19A0A0B4J1K4 119 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Trav7-5A0A0G2JFX6 112 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tnfrsf9P20334 256 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tmem136Q3TYE7 245 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Vsig4F6TUL9 280 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Emp2O88662 172 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 PlnP61014 52 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Defb33Q30KN3 62 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Slc35d2Q762D5 326 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Prr23a3Q9CWP9 254 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tmem219Q9D123 240 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Wfdc15bQ9JHY4 80 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ptprz1B9EKR1 2312 aa14.39□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tmem88bQ3TYP4 173 aa14.38□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ang2Q64438 145 aa14.38□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Cxcl14Q9WUQ5 99 aa14.38□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Adgrg4B7ZCC9 3073 aa14.38□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Socs3O35718 225 aa14.38□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ighv5-8A0A075B676 92 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Il22ra1Q80XZ4 581 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Olfr498Q8VEW2 330 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 OtorQ9JIE3 128 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ighv1-74A0A0G2JGK2 117 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 G0s2Q61585 103 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Rbfox3Q8BIF2 374 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tmem11Q8BK08 190 aa14.37□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Trav16d-dv11A0A075B617 117 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Ighv3-4A0A0A6YXF1 117 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Olfr311Q5NC59 308 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Psmb11Q8BG41 302 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Wfdc21Q8BTE6 63 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Wfdc2Q9DAU7 174 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Slc25a20Q9Z2Z6 301 aaKnown RBP14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Tmem238lA0A1B0GS74 79 aa14.36□□□□□ -0.11
Shkbp1-201ENSMUST00000003857 Gm10036E9PYL9 178 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 66.4 ms