RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 HIST1H4AP62805 103 aaKnown RBP11.13□□□□□ -0.63
PHGDH-210ENST00000641115 FP248Q71RG6 208 aaPredicted RBP11.12□□□□□ -0.63
PHGDH-210ENST00000641115 A0A1B0GVX0 72 aa11.11□□□□□ -0.63
PHGDH-210ENST00000641115 PRR15Q8IV56 129 aa11.11□□□□□ -0.63
PHGDH-210ENST00000641115 IGHV6-1A0A0B4J1U7 121 aa11.09□□□□□ -0.63
PHGDH-210ENST00000641115 IMUPQ9GZP8 106 aa11.07□□□□□ -0.64
PHGDH-210ENST00000641115 PRR4Q16378 134 aa11.05□□□□□ -0.64
PHGDH-210ENST00000641115 IGLV7-46A0A075B6I9 117 aa11.03□□□□□ -0.64
PHGDH-210ENST00000641115 C8orf87E5RJ46 101 aa11.02□□□□□ -0.64
PHGDH-210ENST00000641115 A0A087WVE0 104 aa11.02□□□□□ -0.65
PHGDH-210ENST00000641115 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
PHGDH-210ENST00000641115 HERC1Q15751 4861 aa11.01□□□□□ -0.65
PHGDH-210ENST00000641115 LINC00313P59037 77 aa11□□□□□ -0.65
PHGDH-210ENST00000641115 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
PHGDH-210ENST00000641115 HCG22E2RYF7 251 aa10.98□□□□□ -0.65
PHGDH-210ENST00000641115 NOTCH2NLQ7Z3S9 236 aa10.98□□□□□ -0.65
PHGDH-210ENST00000641115 WFDC13Q8IUB5 93 aa10.96□□□□□ -0.65
PHGDH-210ENST00000641115 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
PHGDH-210ENST00000641115 CASC2Q6XLA1 102 aa10.95□□□□□ -0.66
PHGDH-210ENST00000641115 hDV103S1A0JD37 113 aa10.95□□□□□ -0.66
PHGDH-210ENST00000641115 KRTAP13-3Q3SY46 172 aa10.91□□□□□ -0.66
PHGDH-210ENST00000641115 TMEM254Q8TBM7 123 aa10.9□□□□□ -0.66
PHGDH-210ENST00000641115 TPRXLQ17RH7 258 aa10.89□□□□□ -0.67
PHGDH-210ENST00000641115 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
PHGDH-210ENST00000641115 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
PHGDH-210ENST00000641115 MRPL34Q9BQ48 92 aaKnown RBP10.87□□□□□ -0.67
PHGDH-210ENST00000641115 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
PHGDH-210ENST00000641115 SCGB1A1P11684 91 aa10.84□□□□□ -0.67
PHGDH-210ENST00000641115 NDUFS5O43920 106 aa10.8□□□□□ -0.68
PHGDH-210ENST00000641115 Q8N9P0 234 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-210ENST00000641115 XP32Q5T750 250 aa10.79□□□□□ -0.68
PHGDH-210ENST00000641115 C20orf166-AS1Q96NR2 134 aa10.76□□□□□ -0.69
PHGDH-210ENST00000641115 A8MUU9 505 aa10.74□□□□□ -0.69
PHGDH-210ENST00000641115 ATOX1O00244 68 aa10.74□□□□□ -0.69
PHGDH-210ENST00000641115 Q75L30 129 aa10.73□□□□□ -0.69
PHGDH-210ENST00000641115 TP53AIP1Q9HCN2 124 aa10.72□□□□□ -0.69
PHGDH-210ENST00000641115 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
PHGDH-210ENST00000641115 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
PHGDH-210ENST00000641115 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
PHGDH-210ENST00000641115 HMCN2Q8NDA2 5059 aa10.67□□□□□ -0.7
PHGDH-210ENST00000641115 UQCRQO14949 82 aa10.66□□□□□ -0.7
PHGDH-210ENST00000641115 TRAV7A0A075B6U4 112 aa10.63□□□□□ -0.71
PHGDH-210ENST00000641115 ATP11AUNQ6ZP68 121 aa10.63□□□□□ -0.71
PHGDH-210ENST00000641115 LPAP08519 4548 aa10.63□□□□□ -0.71
PHGDH-210ENST00000641115 ZCCHC13Q8WW36 166 aaKnown RBP10.62□□□□□ -0.71
PHGDH-210ENST00000641115 TRAV22A0A0B4J277 110 aa10.59□□□□□ -0.71
PHGDH-210ENST00000641115 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
PHGDH-210ENST00000641115 SERP2Q8N6R1 65 aa10.58□□□□□ -0.72
PHGDH-210ENST00000641115 Q5W150 140 aa10.58□□□□□ -0.72
PHGDH-210ENST00000641115 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
PHGDH-210ENST00000641115 H0Y9P7 68 aa10.55□□□□□ -0.72
PHGDH-210ENST00000641115 SEC61BP60468 96 aaKnown RBP10.55□□□□□ -0.72
PHGDH-210ENST00000641115 MP68P56378 58 aa10.54□□□□□ -0.72
PHGDH-210ENST00000641115 PCOTHQ58A44 107 aa10.52□□□□□ -0.73
PHGDH-210ENST00000641115 LRP2P98164 4655 aa10.51□□□□□ -0.73
PHGDH-210ENST00000641115 COX7CP15954 63 aa10.49□□□□□ -0.73
PHGDH-210ENST00000641115 H3BPC8 53 aa10.46□□□□□ -0.74
PHGDH-210ENST00000641115 LINC00208Q96KT6 92 aa10.45□□□□□ -0.74
PHGDH-210ENST00000641115 LOC101927531A0A1B0GV80 90 aa10.44□□□□□ -0.74
PHGDH-210ENST00000641115 C1orf64Q8NEQ6 169 aa10.44□□□□□ -0.74
PHGDH-210ENST00000641115 IGKV2D-30A0A075B6S6 120 aa10.42□□□□□ -0.74
PHGDH-210ENST00000641115 IGKV2-30P06310 120 aa10.42□□□□□ -0.74
PHGDH-210ENST00000641115 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
PHGDH-210ENST00000641115 C7orf65Q6ZTY9 151 aa10.4□□□□□ -0.74
PHGDH-210ENST00000641115 A0A0U1RQV1 116 aa10.38□□□□□ -0.75
PHGDH-210ENST00000641115 SPINK7P58062 85 aa10.37□□□□□ -0.75
PHGDH-210ENST00000641115 SNURFQ9Y675 71 aa10.36□□□□□ -0.75
PHGDH-210ENST00000641115 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
PHGDH-210ENST00000641115 UBR4Q5T4S7 5183 aa10.35□□□□□ -0.75
PHGDH-210ENST00000641115 KLKP1Q107X0 134 aa10.33□□□□□ -0.76
PHGDH-210ENST00000641115 CCDC179H3BU77 68 aa10.32□□□□□ -0.76
PHGDH-210ENST00000641115 PCP4P48539 62 aa10.29□□□□□ -0.76
PHGDH-210ENST00000641115 MUC17Q685J3 4493 aa10.25□□□□□ -0.77
PHGDH-210ENST00000641115 KRTAP4-1Q9BYQ7 146 aa10.24□□□□□ -0.77
PHGDH-210ENST00000641115 NDUFC1O43677 76 aa10.22□□□□□ -0.77
PHGDH-210ENST00000641115 HRES1P13985 223 aa10.19□□□□□ -0.78
PHGDH-210ENST00000641115 CYSTM1Q9H1C7 97 aa10.19□□□□□ -0.78
PHGDH-210ENST00000641115 C4orf26Q17RF5 130 aa10.15□□□□□ -0.78
PHGDH-210ENST00000641115 H7BZZ5 65 aa10.14□□□□□ -0.79
PHGDH-210ENST00000641115 RBM12B-AS1Q9P1G2 102 aa10.13□□□□□ -0.79
PHGDH-210ENST00000641115 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
PHGDH-210ENST00000641115 RNF213Q63HN8 5207 aa10.09□□□□□ -0.79
PHGDH-210ENST00000641115 SPANXA2-OT1Q8N9U9 137 aa10.07□□□□□ -0.8
PHGDH-210ENST00000641115 COX6B2Q6YFQ2 88 aa10.07□□□□□ -0.8
PHGDH-210ENST00000641115 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
PHGDH-210ENST00000641115 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
PHGDH-210ENST00000641115 MUC2Q02817 5179 aa10.01□□□□□ -0.81
PHGDH-210ENST00000641115 A8MUN3 132 aa9.99□□□□□ -0.81
PHGDH-210ENST00000641115 TMEM258P61165 79 aa9.99□□□□□ -0.81
PHGDH-210ENST00000641115 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
PHGDH-210ENST00000641115 KRTAP3-1Q9BYR8 98 aa9.96□□□□□ -0.82
PHGDH-210ENST00000641115 ATP5EP56381 51 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-210ENST00000641115 H1FX-AS1Q4G0G2 97 aa9.91□□□□□ -0.82
PHGDH-210ENST00000641115 ACYP2P14621 99 aa9.9□□□□□ -0.82
PHGDH-210ENST00000641115 KRTAP19-2Q3LHN2 52 aa9.9□□□□□ -0.82
PHGDH-210ENST00000641115 LCE2CQ5TA81 110 aa9.8□□□□□ -0.84
PHGDH-210ENST00000641115 S4R3F8 94 aa9.79□□□□□ -0.84
PHGDH-210ENST00000641115 CHKB-CPT1BH3BT56 60 aa9.76□□□□□ -0.85
PHGDH-210ENST00000641115 COA5Q86WW8 74 aa9.76□□□□□ -0.85
PHGDH-210ENST00000641115 LCA10Q71F78 164 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms