RNA–Protein interactions for RNA: ENST00000640460.1

PAX6-272, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-272ENST00000640460 Q96NJ1 140 aa7.15□□□□□ -1.26
PAX6-272ENST00000640460 IGKV4-1P06312 121 aa7.15□□□□□ -1.27
PAX6-272ENST00000640460 RETNLBQ9BQ08 111 aa7.15□□□□□ -1.27
PAX6-272ENST00000640460 CD164Q04900 197 aa7.14□□□□□ -1.27
PAX6-272ENST00000640460 K7EQZ3 153 aa7.12□□□□□ -1.27
PAX6-272ENST00000640460 RPS29P62273 56 aaKnown RBP7.12□□□□□ -1.27
PAX6-272ENST00000640460 RNF213Q63HN8 5207 aa7.11□□□□□ -1.27
PAX6-272ENST00000640460 SS18L2Q9UHA2 77 aa7.09□□□□□ -1.27
PAX6-272ENST00000640460 Q5XG85 94 aa7.07□□□□□ -1.28
PAX6-272ENST00000640460 A8MWP4 228 aa7.06□□□□□ -1.28
PAX6-272ENST00000640460 PRR15Q8IV56 129 aa7.06□□□□□ -1.28
PAX6-272ENST00000640460 ASB16-AS1Q495Z4 193 aa7.05□□□□□ -1.28
PAX6-272ENST00000640460 ANAPC13Q9BS18 74 aa7.05□□□□□ -1.28
PAX6-272ENST00000640460 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
PAX6-272ENST00000640460 J3KT08 172 aa7.04□□□□□ -1.28
PAX6-272ENST00000640460 LIMD2Q9BT23 127 aa7.04□□□□□ -1.28
PAX6-272ENST00000640460 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
PAX6-272ENST00000640460 ATOX1O00244 68 aa7.02□□□□□ -1.29
PAX6-272ENST00000640460 C1orf195Q5TG92 126 aa7.02□□□□□ -1.29
PAX6-272ENST00000640460 TPRXLQ17RH7 258 aa7.01□□□□□ -1.29
PAX6-272ENST00000640460 HCG22E2RYF7 251 aa7□□□□□ -1.29
PAX6-272ENST00000640460 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
PAX6-272ENST00000640460 MMP24-AS1A0A0U1RRL7 71 aa6.98□□□□□ -1.29
PAX6-272ENST00000640460 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
PAX6-272ENST00000640460 NDUFB1O75438 58 aa6.98□□□□□ -1.29
PAX6-272ENST00000640460 WFDC13Q8IUB5 93 aa6.98□□□□□ -1.29
PAX6-272ENST00000640460 CCDC179H3BU77 68 aa6.97□□□□□ -1.29
PAX6-272ENST00000640460 IGHV6-1A0A0B4J1U7 121 aa6.96□□□□□ -1.29
PAX6-272ENST00000640460 KRTAP13-3Q3SY46 172 aa6.96□□□□□ -1.29
PAX6-272ENST00000640460 SERP2Q8N6R1 65 aa6.96□□□□□ -1.29
PAX6-272ENST00000640460 OCR1Q9BZK8 76 aa6.96□□□□□ -1.3
PAX6-272ENST00000640460 COX7CP15954 63 aa6.95□□□□□ -1.3
PAX6-272ENST00000640460 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
PAX6-272ENST00000640460 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
PAX6-272ENST00000640460 CASC2Q6XLA1 102 aa6.93□□□□□ -1.3
PAX6-272ENST00000640460 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
PAX6-272ENST00000640460 hDV103S1A0JD37 113 aa6.92□□□□□ -1.3
PAX6-272ENST00000640460 MUC2Q02817 5179 aa6.92□□□□□ -1.3
PAX6-272ENST00000640460 UQCRQO14949 82 aa6.91□□□□□ -1.3
PAX6-272ENST00000640460 SMIM20Q8N5G0 67 aa6.91□□□□□ -1.3
PAX6-272ENST00000640460 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
PAX6-272ENST00000640460 LINC00313P59037 77 aa6.86□□□□□ -1.31
PAX6-272ENST00000640460 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
PAX6-272ENST00000640460 C8orf87E5RJ46 101 aa6.85□□□□□ -1.31
PAX6-272ENST00000640460 XP32Q5T750 250 aa6.85□□□□□ -1.31
PAX6-272ENST00000640460 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
PAX6-272ENST00000640460 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
PAX6-272ENST00000640460 KRTAP16-1A8MUX0 517 aa6.84□□□□□ -1.31
PAX6-272ENST00000640460 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
PAX6-272ENST00000640460 A0A0U1RQV1 116 aa6.81□□□□□ -1.32
PAX6-272ENST00000640460 SNURFQ9Y675 71 aa6.81□□□□□ -1.32
PAX6-272ENST00000640460 C5orf47Q569G3 176 aa6.79□□□□□ -1.32
PAX6-272ENST00000640460 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
PAX6-272ENST00000640460 NDUFS5O43920 106 aa6.79□□□□□ -1.32
PAX6-272ENST00000640460 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
PAX6-272ENST00000640460 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
PAX6-272ENST00000640460 KRTAP4-1Q9BYQ7 146 aa6.77□□□□□ -1.33
PAX6-272ENST00000640460 SEC61BP60468 96 aaKnown RBP6.76□□□□□ -1.33
PAX6-272ENST00000640460 Q5W150 140 aa6.76□□□□□ -1.33
PAX6-272ENST00000640460 FAT4Q6V0I7 4981 aa6.76□□□□□ -1.33
PAX6-272ENST00000640460 ZCCHC13Q8WW36 166 aaKnown RBP6.76□□□□□ -1.33
PAX6-272ENST00000640460 H0Y9P7 68 aa6.74□□□□□ -1.33
PAX6-272ENST00000640460 LCE2AQ5TA79 106 aaPredicted RBP6.74□□□□□ -1.33
PAX6-272ENST00000640460 TRAV22A0A0B4J277 110 aa6.73□□□□□ -1.33
PAX6-272ENST00000640460 H7BZZ5 65 aa6.73□□□□□ -1.33
PAX6-272ENST00000640460 RPL37P61927 97 aaKnown RBP6.72□□□□□ -1.33
PAX6-272ENST00000640460 MP68P56378 58 aa6.71□□□□□ -1.34
PAX6-272ENST00000640460 LINC00208Q96KT6 92 aa6.71□□□□□ -1.34
PAX6-272ENST00000640460 PCOTHQ58A44 107 aa6.7□□□□□ -1.34
PAX6-272ENST00000640460 C1orf64Q8NEQ6 169 aa6.68□□□□□ -1.34
PAX6-272ENST00000640460 A8MUU9 505 aa6.67□□□□□ -1.34
PAX6-272ENST00000640460 H3BPC8 53 aa6.67□□□□□ -1.34
PAX6-272ENST00000640460 Q75L30 129 aa6.67□□□□□ -1.34
PAX6-272ENST00000640460 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
PAX6-272ENST00000640460 NDUFC1O43677 76 aa6.65□□□□□ -1.34
PAX6-272ENST00000640460 TMEM258P61165 79 aa6.63□□□□□ -1.35
PAX6-272ENST00000640460 ATP11AUNQ6ZP68 121 aa6.61□□□□□ -1.35
PAX6-272ENST00000640460 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
PAX6-272ENST00000640460 LOC101927531A0A1B0GV80 90 aa6.59□□□□□ -1.35
PAX6-272ENST00000640460 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.36
PAX6-272ENST00000640460 IGKV2-30P06310 120 aa6.58□□□□□ -1.36
PAX6-272ENST00000640460 LCE2CQ5TA81 110 aa6.58□□□□□ -1.36
PAX6-272ENST00000640460 FAM236DA0A1B0GTK5 79 aa6.56□□□□□ -1.36
PAX6-272ENST00000640460 FAM236CP0DP71 79 aa6.56□□□□□ -1.36
PAX6-272ENST00000640460 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
PAX6-272ENST00000640460 KRTAP9-2Q9BYQ4 174 aa6.53□□□□□ -1.36
PAX6-272ENST00000640460 SPANXA2-OT1Q8N9U9 137 aa6.52□□□□□ -1.37
PAX6-272ENST00000640460 HRES1P13985 223 aa6.49□□□□□ -1.37
PAX6-272ENST00000640460 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
PAX6-272ENST00000640460 MT1HP80294 61 aa6.48□□□□□ -1.37
PAX6-272ENST00000640460 C7orf65Q6ZTY9 151 aa6.47□□□□□ -1.37
PAX6-272ENST00000640460 SPINK7P58062 85 aa6.46□□□□□ -1.38
PAX6-272ENST00000640460 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
PAX6-272ENST00000640460 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
PAX6-272ENST00000640460 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
PAX6-272ENST00000640460 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
PAX6-272ENST00000640460 COX6B2Q6YFQ2 88 aa6.39□□□□□ -1.39
PAX6-272ENST00000640460 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
PAX6-272ENST00000640460 DMAC1Q96GE9 116 aa6.38□□□□□ -1.39
PAX6-272ENST00000640460 KRTAP3-1Q9BYR8 98 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms