RNA–Protein interactions for RNA: ENST00000640141.1

KCNMA1-278, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-278ENST00000640141 APCP25054 2843 aa10.09□□□□□ -0.79
KCNMA1-278ENST00000640141 LAMA1P25391 3075 aa10.07□□□□□ -0.8
KCNMA1-278ENST00000640141 CDH23Q9H251 3354 aa10.06□□□□□ -0.8
KCNMA1-278ENST00000640141 FREM2Q5SZK8 3169 aa10.05□□□□□ -0.8
KCNMA1-278ENST00000640141 ADGRG4Q8IZF6 3080 aa10.05□□□□□ -0.8
KCNMA1-278ENST00000640141 LRBAP50851 2863 aa10.04□□□□□ -0.8
KCNMA1-278ENST00000640141 ASH1LQ9NR48 2969 aaKnown RBP10.04□□□□□ -0.8
KCNMA1-278ENST00000640141 CELSR2Q9HCU4 2923 aa10.01□□□□□ -0.81
KCNMA1-278ENST00000640141 CELSR3Q9NYQ7 3312 aa10□□□□□ -0.81
KCNMA1-278ENST00000640141 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
KCNMA1-278ENST00000640141 TNP1P09430 55 aa9.97□□□□□ -0.81
KCNMA1-278ENST00000640141 BOD1L1Q8NFC6 3051 aa9.96□□□□□ -0.81
KCNMA1-278ENST00000640141 CRYBG3Q68DQ2 2970 aa9.95□□□□□ -0.82
KCNMA1-278ENST00000640141 NBEAQ8NFP9 2946 aa9.93□□□□□ -0.82
KCNMA1-278ENST00000640141 DCHS2Q6V1P9 2916 aa9.9□□□□□ -0.83
KCNMA1-278ENST00000640141 KRTAP1-4P0C5Y4 121 aa9.88□□□□□ -0.83
KCNMA1-278ENST00000640141 SZT2Q5T011 3432 aa9.87□□□□□ -0.83
KCNMA1-278ENST00000640141 KRTAP16-1A8MUX0 517 aa9.87□□□□□ -0.83
KCNMA1-278ENST00000640141 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
KCNMA1-278ENST00000640141 EYSQ5T1H1 3165 aa9.85□□□□□ -0.83
KCNMA1-278ENST00000640141 XP32Q5T750 250 aa9.83□□□□□ -0.84
KCNMA1-278ENST00000640141 VCANP13611 3396 aa9.83□□□□□ -0.84
KCNMA1-278ENST00000640141 TENM3Q9P273 2699 aa9.81□□□□□ -0.84
KCNMA1-278ENST00000640141 NDUFAF8A1L188 74 aa9.73□□□□□ -0.85
KCNMA1-278ENST00000640141 PP632Q6XCG6 107 aa9.69□□□□□ -0.86
KCNMA1-278ENST00000640141 TPRXLQ17RH7 258 aa9.69□□□□□ -0.86
KCNMA1-278ENST00000640141 C10orf95Q9H7T3 257 aa9.68□□□□□ -0.86
KCNMA1-278ENST00000640141 COL6A3P12111 3177 aa9.67□□□□□ -0.86
KCNMA1-278ENST00000640141 NF1P21359 2839 aa9.66□□□□□ -0.86
KCNMA1-278ENST00000640141 TENM1Q9UKZ4 2725 aa9.66□□□□□ -0.86
KCNMA1-278ENST00000640141 KRTAP10-8P60410 259 aa9.66□□□□□ -0.86
KCNMA1-278ENST00000640141 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
KCNMA1-278ENST00000640141 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
KCNMA1-278ENST00000640141 TNRC18O15417 2968 aaPredicted RBP9.55□□□□□ -0.88
KCNMA1-278ENST00000640141 HRNRQ86YZ3 2850 aaPredicted RBP9.52□□□□□ -0.88
KCNMA1-278ENST00000640141 H0YAA0 97 aa9.52□□□□□ -0.89
KCNMA1-278ENST00000640141 FBN2P35556 2912 aa9.52□□□□□ -0.89
KCNMA1-278ENST00000640141 DMXL1Q9Y485 3027 aa9.51□□□□□ -0.89
KCNMA1-278ENST00000640141 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
KCNMA1-278ENST00000640141 DNAH14Q0VDD8 3507 aa9.5□□□□□ -0.89
KCNMA1-278ENST00000640141 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
KCNMA1-278ENST00000640141 KRTAP10-10P60014 251 aa9.47□□□□□ -0.89
KCNMA1-278ENST00000640141 MXRA5Q9NR99 2828 aa9.42□□□□□ -0.9
KCNMA1-278ENST00000640141 PRO2289Q9P1D8 64 aa9.39□□□□□ -0.91
KCNMA1-278ENST00000640141 USP34Q70CQ2 3546 aa9.39□□□□□ -0.91
KCNMA1-278ENST00000640141 P0C880 135 aa9.39□□□□□ -0.91
KCNMA1-278ENST00000640141 SPEGQ15772 3267 aa9.34□□□□□ -0.91
KCNMA1-278ENST00000640141 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
KCNMA1-278ENST00000640141 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
KCNMA1-278ENST00000640141 LOC400499M0QZD8 3231 aa9.21□□□□□ -0.94
KCNMA1-278ENST00000640141 TGP01266 2768 aa9.2□□□□□ -0.94
KCNMA1-278ENST00000640141 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
KCNMA1-278ENST00000640141 VWFP04275 2813 aa9.12□□□□□ -0.95
KCNMA1-278ENST00000640141 PDZD2O15018 2839 aa9.1□□□□□ -0.95
KCNMA1-278ENST00000640141 MYO15AQ9UKN7 3530 aa9.06□□□□□ -0.96
KCNMA1-278ENST00000640141 DCHS1Q96JQ0 3298 aa9.02□□□□□ -0.97
KCNMA1-278ENST00000640141 KRTAP12-2P59991 146 aa8.96□□□□□ -0.97
KCNMA1-278ENST00000640141 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
KCNMA1-278ENST00000640141 SRRM2Q9UQ35 2752 aaKnown RBP8.86□□□□□ -0.99
KCNMA1-278ENST00000640141 FBN1P35555 2871 aaKnown RBP8.85□□□□□ -0.99
KCNMA1-278ENST00000640141 KRTAP12-1P59990 96 aa8.84□□□□□ -0.99
KCNMA1-278ENST00000640141 RELNP78509 3460 aa8.81□□□□□ -1
KCNMA1-278ENST00000640141 KRTAP3-1Q9BYR8 98 aa8.8□□□□□ -1
KCNMA1-278ENST00000640141 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
KCNMA1-278ENST00000640141 WDFY3Q8IZQ1 3526 aa8.73□□□□□ -1.01
KCNMA1-278ENST00000640141 FBN3Q75N90 2809 aa8.58□□□□□ -1.04
KCNMA1-278ENST00000640141 KRTAP10-6P60371 365 aaPredicted RBP8.57□□□□□ -1.04
KCNMA1-278ENST00000640141 KRTAP15-1Q3LI76 137 aa8.54□□□□□ -1.04
KCNMA1-278ENST00000640141 NBPF19A0A087WUL8 3843 aa8.53□□□□□ -1.04
KCNMA1-278ENST00000640141 ZFHX3Q15911 3703 aa8.52□□□□□ -1.05
KCNMA1-278ENST00000640141 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
KCNMA1-278ENST00000640141 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
KCNMA1-278ENST00000640141 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
KCNMA1-278ENST00000640141 LAMA5O15230 3695 aa8.4□□□□□ -1.07
KCNMA1-278ENST00000640141 ZFHX4Q86UP3 3567 aa8.32□□□□□ -1.08
KCNMA1-278ENST00000640141 ASPMQ8IZT6 3477 aa8.32□□□□□ -1.08
KCNMA1-278ENST00000640141 ANK3Q12955 4377 aaKnown RBP8.28□□□□□ -1.08
KCNMA1-278ENST00000640141 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
KCNMA1-278ENST00000640141 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
KCNMA1-278ENST00000640141 KRTAP10-4P60372 401 aaPredicted RBP8.19□□□□□ -1.1
KCNMA1-278ENST00000640141 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
KCNMA1-278ENST00000640141 KRTAP4-5Q9BYR2 181 aa8.11□□□□□ -1.11
KCNMA1-278ENST00000640141 MUC3AQ02505 3323 aa8.08□□□□□ -1.12
KCNMA1-278ENST00000640141 TRRAPQ9Y4A5 3859 aa8.08□□□□□ -1.12
KCNMA1-278ENST00000640141 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
KCNMA1-278ENST00000640141 CSMD2Q7Z408 3487 aa8.05□□□□□ -1.12
KCNMA1-278ENST00000640141 INE1O15225 51 aa8.01□□□□□ -1.13
KCNMA1-278ENST00000640141 SMG1Q96Q15 3661 aaKnown RBP7.98□□□□□ -1.13
KCNMA1-278ENST00000640141 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
KCNMA1-278ENST00000640141 DMDP11532 3685 aa7.96□□□□□ -1.14
KCNMA1-278ENST00000640141 KRTAP12-3P60328 96 aa7.96□□□□□ -1.14
KCNMA1-278ENST00000640141 KRTAP23-1A1A580 65 aa7.92□□□□□ -1.14
KCNMA1-278ENST00000640141 SVEP1Q4LDE5 3571 aa7.83□□□□□ -1.16
KCNMA1-278ENST00000640141 HUWE1Q7Z6Z7 4374 aaKnown RBP7.82□□□□□ -1.16
KCNMA1-278ENST00000640141 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
KCNMA1-278ENST00000640141 CUBNO60494 3623 aa7.8□□□□□ -1.16
KCNMA1-278ENST00000640141 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
KCNMA1-278ENST00000640141 SPENQ96T58 3664 aaKnown RBP7.74□□□□□ -1.17
KCNMA1-278ENST00000640141 ALMS1Q8TCU4 4167 aa7.65□□□□□ -1.18
KCNMA1-278ENST00000640141 KRTAP8-1Q8IUC2 63 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms