RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 ASH1LQ9NR48 2969 aaKnown RBP5.77□□□□□ -1.49
KCNQ3-208ENST00000639496 USP34Q70CQ2 3546 aa5.76□□□□□ -1.49
KCNQ3-208ENST00000639496 LAMA1P25391 3075 aa5.76□□□□□ -1.49
KCNQ3-208ENST00000639496 CDH23Q9H251 3354 aa5.75□□□□□ -1.49
KCNQ3-208ENST00000639496 TENM1Q9UKZ4 2725 aa5.74□□□□□ -1.49
KCNQ3-208ENST00000639496 LRBAP50851 2863 aa5.73□□□□□ -1.49
KCNQ3-208ENST00000639496 DCHS2Q6V1P9 2916 aa5.71□□□□□ -1.49
KCNQ3-208ENST00000639496 KALRNO60229 2985 aa5.71□□□□□ -1.5
KCNQ3-208ENST00000639496 DNAH14Q0VDD8 3507 aa5.69□□□□□ -1.5
KCNQ3-208ENST00000639496 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
KCNQ3-208ENST00000639496 NF1P21359 2839 aa5.69□□□□□ -1.5
KCNQ3-208ENST00000639496 TENM2Q9NT68 2774 aa5.68□□□□□ -1.5
KCNQ3-208ENST00000639496 VCANP13611 3396 aa5.67□□□□□ -1.5
KCNQ3-208ENST00000639496 CELSR3Q9NYQ7 3312 aa5.66□□□□□ -1.5
KCNQ3-208ENST00000639496 BOD1L1Q8NFC6 3051 aa5.65□□□□□ -1.5
KCNQ3-208ENST00000639496 NBEAQ8NFP9 2946 aa5.63□□□□□ -1.51
KCNQ3-208ENST00000639496 TNP1P09430 55 aa5.63□□□□□ -1.51
KCNQ3-208ENST00000639496 FREM2Q5SZK8 3169 aa5.62□□□□□ -1.51
KCNQ3-208ENST00000639496 ZANQ9Y493 2812 aa5.6□□□□□ -1.51
KCNQ3-208ENST00000639496 SZT2Q5T011 3432 aa5.6□□□□□ -1.51
KCNQ3-208ENST00000639496 ADGRG4Q8IZF6 3080 aa5.59□□□□□ -1.51
KCNQ3-208ENST00000639496 A8MU10 97 aa5.59□□□□□ -1.51
KCNQ3-208ENST00000639496 XP32Q5T750 250 aa5.56□□□□□ -1.52
KCNQ3-208ENST00000639496 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
KCNQ3-208ENST00000639496 TPRXLQ17RH7 258 aa5.55□□□□□ -1.52
KCNQ3-208ENST00000639496 PKD1L1Q8TDX9 2849 aa5.54□□□□□ -1.52
KCNQ3-208ENST00000639496 EYSQ5T1H1 3165 aa5.5□□□□□ -1.53
KCNQ3-208ENST00000639496 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
KCNQ3-208ENST00000639496 TNRC18O15417 2968 aaPredicted RBP5.49□□□□□ -1.53
KCNQ3-208ENST00000639496 KRTAP25-1Q3LHN0 102 aa5.49□□□□□ -1.53
KCNQ3-208ENST00000639496 SPEGQ15772 3267 aa5.49□□□□□ -1.53
KCNQ3-208ENST00000639496 H3BS24 57 aa5.47□□□□□ -1.53
KCNQ3-208ENST00000639496 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
KCNQ3-208ENST00000639496 PDZD2O15018 2839 aa5.44□□□□□ -1.54
KCNQ3-208ENST00000639496 MXRA5Q9NR99 2828 aa5.44□□□□□ -1.54
KCNQ3-208ENST00000639496 A0A1B0GVY2 172 aa5.44□□□□□ -1.54
KCNQ3-208ENST00000639496 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
KCNQ3-208ENST00000639496 PRO2289Q9P1D8 64 aa5.42□□□□□ -1.54
KCNQ3-208ENST00000639496 A6NN06 94 aa5.41□□□□□ -1.54
KCNQ3-208ENST00000639496 COL6A3P12111 3177 aa5.39□□□□□ -1.55
KCNQ3-208ENST00000639496 KRTAP13-3Q3SY46 172 aa5.39□□□□□ -1.55
KCNQ3-208ENST00000639496 FBN2P35556 2912 aa5.38□□□□□ -1.55
KCNQ3-208ENST00000639496 VWFP04275 2813 aa5.37□□□□□ -1.55
KCNQ3-208ENST00000639496 DMXL1Q9Y485 3027 aa5.37□□□□□ -1.55
KCNQ3-208ENST00000639496 SRRM2Q9UQ35 2752 aaKnown RBP5.36□□□□□ -1.55
KCNQ3-208ENST00000639496 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
KCNQ3-208ENST00000639496 CFAP47Q6ZTR5 3102 aa5.35□□□□□ -1.55
KCNQ3-208ENST00000639496 KRTAP16-1A8MUX0 517 aa5.34□□□□□ -1.55
KCNQ3-208ENST00000639496 SPTBN5Q9NRC6 3674 aaKnown RBP5.34□□□□□ -1.55
KCNQ3-208ENST00000639496 TGP01266 2768 aa5.33□□□□□ -1.56
KCNQ3-208ENST00000639496 MYO15AQ9UKN7 3530 aa5.3□□□□□ -1.56
KCNQ3-208ENST00000639496 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
KCNQ3-208ENST00000639496 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
KCNQ3-208ENST00000639496 HRNRQ86YZ3 2850 aaPredicted RBP5.25□□□□□ -1.57
KCNQ3-208ENST00000639496 LOC400499M0QZD8 3231 aa5.25□□□□□ -1.57
KCNQ3-208ENST00000639496 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
KCNQ3-208ENST00000639496 P0C880 135 aa5.19□□□□□ -1.58
KCNQ3-208ENST00000639496 H0YAA0 97 aa5.19□□□□□ -1.58
KCNQ3-208ENST00000639496 MUC3AQ02505 3323 aa5.15□□□□□ -1.58
KCNQ3-208ENST00000639496 WDFY3Q8IZQ1 3526 aa5.1□□□□□ -1.59
KCNQ3-208ENST00000639496 DCHS1Q96JQ0 3298 aa5.08□□□□□ -1.6
KCNQ3-208ENST00000639496 FBN1P35555 2871 aaKnown RBP5.08□□□□□ -1.6
KCNQ3-208ENST00000639496 ZFHX4Q86UP3 3567 aa4.98□□□□□ -1.61
KCNQ3-208ENST00000639496 RELNP78509 3460 aa4.97□□□□□ -1.61
KCNQ3-208ENST00000639496 ASPMQ8IZT6 3477 aa4.97□□□□□ -1.61
KCNQ3-208ENST00000639496 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
KCNQ3-208ENST00000639496 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
KCNQ3-208ENST00000639496 COL7A1Q02388 2944 aa4.94□□□□□ -1.62
KCNQ3-208ENST00000639496 LAMA5O15230 3695 aa4.92□□□□□ -1.62
KCNQ3-208ENST00000639496 KRTAP12-2P59991 146 aa4.9□□□□□ -1.63
KCNQ3-208ENST00000639496 DMDP11532 3685 aa4.88□□□□□ -1.63
KCNQ3-208ENST00000639496 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
KCNQ3-208ENST00000639496 CSMD1Q96PZ7 3565 aa4.87□□□□□ -1.63
KCNQ3-208ENST00000639496 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
KCNQ3-208ENST00000639496 SMG1Q96Q15 3661 aaKnown RBP4.85□□□□□ -1.63
KCNQ3-208ENST00000639496 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
KCNQ3-208ENST00000639496 KRTAP3-1Q9BYR8 98 aa4.83□□□□□ -1.64
KCNQ3-208ENST00000639496 ZFHX3Q15911 3703 aa4.8□□□□□ -1.64
KCNQ3-208ENST00000639496 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
KCNQ3-208ENST00000639496 SVEP1Q4LDE5 3571 aa4.75□□□□□ -1.65
KCNQ3-208ENST00000639496 KRTAP10-6P60371 365 aaPredicted RBP4.71□□□□□ -1.66
KCNQ3-208ENST00000639496 CUBNO60494 3623 aa4.68□□□□□ -1.66
KCNQ3-208ENST00000639496 NBPF19A0A087WUL8 3843 aa4.66□□□□□ -1.66
KCNQ3-208ENST00000639496 KRTAP4-5Q9BYR2 181 aa4.65□□□□□ -1.67
KCNQ3-208ENST00000639496 KRTAP10-4P60372 401 aaPredicted RBP4.62□□□□□ -1.67
KCNQ3-208ENST00000639496 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
KCNQ3-208ENST00000639496 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
KCNQ3-208ENST00000639496 KRTAP3-3Q9BYR6 98 aa4.52□□□□□ -1.69
KCNQ3-208ENST00000639496 KRTAP3-2Q9BYR7 98 aa4.52□□□□□ -1.69
KCNQ3-208ENST00000639496 CRCT1Q9UGL9 99 aa4.5□□□□□ -1.69
KCNQ3-208ENST00000639496 CSMD2Q7Z408 3487 aa4.48□□□□□ -1.69
KCNQ3-208ENST00000639496 BSNQ9UPA5 3926 aa4.48□□□□□ -1.69
KCNQ3-208ENST00000639496 KRTAP12-3P60328 96 aa4.47□□□□□ -1.69
KCNQ3-208ENST00000639496 ANK3Q12955 4377 aaKnown RBP4.43□□□□□ -1.7
KCNQ3-208ENST00000639496 KRTAP23-1A1A580 65 aa4.41□□□□□ -1.7
KCNQ3-208ENST00000639496 TRRAPQ9Y4A5 3859 aa4.4□□□□□ -1.7
KCNQ3-208ENST00000639496 INE1O15225 51 aa4.37□□□□□ -1.71
KCNQ3-208ENST00000639496 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
KCNQ3-208ENST00000639496 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
KCNQ3-208ENST00000639496 LCE3AQ5TA76 89 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms