RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 DMBT1Q9UGM3 2413 aaPredicted RBP1.02□□□□□ -2.25
SYNGAP1-221ENST00000637490 DCHS2Q6V1P9 2916 aa1.02□□□□□ -2.25
SYNGAP1-221ENST00000637490 USP34Q70CQ2 3546 aa1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 NIPBLQ6KC79 2804 aaeCLIP1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 TTC28Q96AY4 2481 aa1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 APCP25054 2843 aa1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 ZFHX4Q86UP3 3567 aa1.01□□□□□ -2.25
SYNGAP1-221ENST00000637490 TLN1Q9Y490 2541 aaKnown RBP1□□□□□ -2.25
SYNGAP1-221ENST00000637490 DNAH14Q0VDD8 3507 aa1□□□□□ -2.25
SYNGAP1-221ENST00000637490 SETD2Q9BYW2 2564 aaPredicted RBP1□□□□□ -2.25
SYNGAP1-221ENST00000637490 SPTAN1Q13813 2472 aaKnown RBP1□□□□□ -2.25
SYNGAP1-221ENST00000637490 LAMA3Q16787 3333 aa1□□□□□ -2.25
SYNGAP1-221ENST00000637490 CSMD1Q96PZ7 3565 aa1□□□□□ -2.25
SYNGAP1-221ENST00000637490 VCANP13611 3396 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 TEX15Q9BXT5 2789 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 CENPEQ02224 2701 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 NBPF19A0A087WUL8 3843 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 LCE5AQ5TCM9 118 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 DOPEY1Q5JWR5 2465 aa0.99□□□□□ -2.25
SYNGAP1-221ENST00000637490 TGP01266 2768 aa0.98□□□□□ -2.25
SYNGAP1-221ENST00000637490 TENM4Q6N022 2769 aa0.98□□□□□ -2.25
SYNGAP1-221ENST00000637490 TLN2Q9Y4G6 2542 aa0.98□□□□□ -2.25
SYNGAP1-221ENST00000637490 RELNP78509 3460 aa0.98□□□□□ -2.25
SYNGAP1-221ENST00000637490 USP9XQ93008 2570 aaPredicted RBP0.98□□□□□ -2.25
SYNGAP1-221ENST00000637490 LRRK2Q5S007 2527 aa0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 WDFY3Q8IZQ1 3526 aa0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 ITPR3Q14573 2671 aa0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 MT3P25713 68 aa0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 UTP20O75691 2785 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 SETXQ7Z333 2677 aaKnown RBP0.97□□□□□ -2.25
SYNGAP1-221ENST00000637490 CACNA1AO00555 2505 aa0.96□□□□□ -2.26
SYNGAP1-221ENST00000637490 ABCA12Q86UK0 2595 aa0.96□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP10-2P60368 255 aa0.96□□□□□ -2.26
SYNGAP1-221ENST00000637490 HRNRQ86YZ3 2850 aaPredicted RBP0.96□□□□□ -2.26
SYNGAP1-221ENST00000637490 VPS13DQ5THJ4 4388 aa0.96□□□□□ -2.26
SYNGAP1-221ENST00000637490 PDZD2O15018 2839 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 SPENQ96T58 3664 aaKnown RBP0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 M0R2T5 61 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP10-12P60413 245 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP6-3Q3LI67 103 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP8-1Q8IUC2 63 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 CFAP46Q8IYW2 2715 aa0.95□□□□□ -2.26
SYNGAP1-221ENST00000637490 MTORP42345 2549 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 ADGRG4Q8IZF6 3080 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 CHD8Q9HCK8 2581 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 LAMA5O15230 3695 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP12-4P60329 112 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 LCE1AQ5T7P2 110 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 MYO9AB2RTY4 2548 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 FRAS1Q86XX4 4008 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 HECTD1Q9ULT8 2610 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 ACANP16112 2415 aa0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 USP9YO00507 2555 aaPredicted RBP0.94□□□□□ -2.26
SYNGAP1-221ENST00000637490 BRCA2P51587 3418 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 PIEZO1Q92508 2521 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 CDH23Q9H251 3354 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP9-6A0A140TA67 174 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP1-3Q8IUG1 177 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 HELZ2Q9BYK8 2649 aaKnown RBP0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
SYNGAP1-221ENST00000637490 ZFYVE26Q68DK2 2539 aa0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 UNC79Q9P2D8 2635 aa0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 NBEAL2Q6ZNJ1 2754 aa0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 USP24Q9UPU5 2620 aa0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 STAB2Q8WWQ8 2551 aa0.92□□□□□ -2.26
SYNGAP1-221ENST00000637490 MUC3AQ02505 3323 aa0.91□□□□□ -2.26
SYNGAP1-221ENST00000637490 GCN1Q92616 2671 aaKnown RBP0.91□□□□□ -2.26
SYNGAP1-221ENST00000637490 KRTAP1-1Q07627 177 aa0.91□□□□□ -2.26
SYNGAP1-221ENST00000637490 LCE3AQ5TA76 89 aa0.91□□□□□ -2.26
SYNGAP1-221ENST00000637490 FBN3Q75N90 2809 aa0.91□□□□□ -2.26
SYNGAP1-221ENST00000637490 ZNF292O60281 2723 aa0.9□□□□□ -2.26
SYNGAP1-221ENST00000637490 DNAH11Q96DT5 4516 aa0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 KRTAP10-5P60370 271 aa0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 KRTAP10-4P60372 401 aaPredicted RBP0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 LCE1FQ5T754 118 aa0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 BSNQ9UPA5 3926 aa0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 ASPMQ8IZT6 3477 aa0.9□□□□□ -2.27
SYNGAP1-221ENST00000637490 CSMD3Q7Z407 3707 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 TRRAPQ9Y4A5 3859 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 SMG1Q96Q15 3661 aaKnown RBP0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 NBEAL1Q6ZS30 2694 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 KRTAP12-3P60328 96 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 TEP1Q99973 2627 aaKnown RBP0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 MYCBP2O75592 4640 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 EYSQ5T1H1 3165 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
SYNGAP1-221ENST00000637490 FBN2P35556 2912 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 MXRA5Q9NR99 2828 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 ITPR2Q14571 2701 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 ZANQ9Y493 2812 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 LCE1EQ5T753 118 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 PKD1L1Q8TDX9 2849 aa0.88□□□□□ -2.27
SYNGAP1-221ENST00000637490 J3QKU1 62 aa0.87□□□□□ -2.27
SYNGAP1-221ENST00000637490 KRTAP9-4Q9BYQ2 154 aa0.87□□□□□ -2.27
SYNGAP1-221ENST00000637490 BDP1A6H8Y1 2624 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms