RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 MYT1Q01538 1121 aa4.88□□□□□ -1.63
SYNGAP1-221ENST00000637490 PELP1Q8IZL8 1130 aaKnown RBP4.83□□□□□ -1.64
SYNGAP1-221ENST00000637490 TTBK1Q5TCY1 1321 aaPredicted RBP4.78□□□□□ -1.64
SYNGAP1-221ENST00000637490 SLC24A1O60721 1099 aa4.74□□□□□ -1.65
SYNGAP1-221ENST00000637490 ERICH6Q7L0X2 663 aa4.53□□□□□ -1.68
SYNGAP1-221ENST00000637490 APLP2Q06481 763 aa4.48□□□□□ -1.69
SYNGAP1-221ENST00000637490 DAXXQ9UER7 740 aaPredicted RBP4.48□□□□□ -1.69
SYNGAP1-221ENST00000637490 PRKCSHP14314 528 aaPredicted RBP4.43□□□□□ -1.7
SYNGAP1-221ENST00000637490 NCBP3Q53F19 620 aaKnown RBP4.25□□□□□ -1.73
SYNGAP1-221ENST00000637490 EIF5BO60841 1220 aaKnown RBP4.2□□□□□ -1.74
SYNGAP1-221ENST00000637490 BCL11AQ9H165 835 aa4.2□□□□□ -1.74
SYNGAP1-221ENST00000637490 ARXQ96QS3 562 aa4.18□□□□□ -1.74
SYNGAP1-221ENST00000637490 RANGAP1P46060 587 aaPredicted RBP4.15□□□□□ -1.75
SYNGAP1-221ENST00000637490 FAM9AQ8IZU1 332 aaPredicted RBP4.08□□□□□ -1.76
SYNGAP1-221ENST00000637490 CENPBP07199 599 aaPredicted RBP4.06□□□□□ -1.76
SYNGAP1-221ENST00000637490 HRCP23327 699 aa4.04□□□□□ -1.76
SYNGAP1-221ENST00000637490 RTN4Q9NQC3 1192 aaKnown RBP4.04□□□□□ -1.76
SYNGAP1-221ENST00000637490 AMER1Q5JTC6 1135 aaPredicted RBP4.03□□□□□ -1.76
SYNGAP1-221ENST00000637490 EHMT2Q96KQ7 1210 aa4.03□□□□□ -1.76
SYNGAP1-221ENST00000637490 HOMEZQ8IX15 550 aa4.01□□□□□ -1.77
SYNGAP1-221ENST00000637490 UBE2Q2Q8WVN8 375 aa4.01□□□□□ -1.77
SYNGAP1-221ENST00000637490 PLPPR3Q6T4P5 718 aa4□□□□□ -1.77
SYNGAP1-221ENST00000637490 SCAF1Q9H7N4 1312 aaKnown RBP3.99□□□□□ -1.77
SYNGAP1-221ENST00000637490 PODXL2Q9NZ53 605 aa3.97□□□□□ -1.77
SYNGAP1-221ENST00000637490 TIMELESSQ9UNS1 1208 aa3.97□□□□□ -1.77
SYNGAP1-221ENST00000637490 PLEKHG5O94827 1062 aa3.95□□□□□ -1.78
SYNGAP1-221ENST00000637490 KLHL34Q8N239 644 aa3.94□□□□□ -1.78
SYNGAP1-221ENST00000637490 NEFLP07196 543 aa3.92□□□□□ -1.78
SYNGAP1-221ENST00000637490 ANP32EQ9BTT0 268 aa3.92□□□□□ -1.78
SYNGAP1-221ENST00000637490 TULP1O00294 542 aaPredicted RBP3.91□□□□□ -1.78
SYNGAP1-221ENST00000637490 PKNOX2Q96KN3 472 aa3.9□□□□□ -1.79
SYNGAP1-221ENST00000637490 PDIA4P13667 645 aaKnown RBP3.89□□□□□ -1.79
SYNGAP1-221ENST00000637490 ERICH6BQ5W0A0 696 aa3.87□□□□□ -1.79
SYNGAP1-221ENST00000637490 FBXO3Q9UK99 471 aa3.87□□□□□ -1.79
SYNGAP1-221ENST00000637490 TAOK2Q9UL54 1235 aa3.87□□□□□ -1.79
SYNGAP1-221ENST00000637490 NPM2Q86SE8 214 aaKnown RBP3.86□□□□□ -1.79
SYNGAP1-221ENST00000637490 DCAF8L2P0C7V8 631 aa3.84□□□□□ -1.79
SYNGAP1-221ENST00000637490 PDE4CQ08493 712 aa3.84□□□□□ -1.79
SYNGAP1-221ENST00000637490 BCANQ96GW7 911 aa3.84□□□□□ -1.79
SYNGAP1-221ENST00000637490 MYT1LQ9UL68 1186 aa3.84□□□□□ -1.79
SYNGAP1-221ENST00000637490 ACIN1Q9UKV3 1341 aaKnown RBP3.84□□□□□ -1.79
SYNGAP1-221ENST00000637490 TAF7LQ5H9L4 462 aa3.83□□□□□ -1.8
SYNGAP1-221ENST00000637490 GTF3C3Q9Y5Q9 886 aa3.81□□□□□ -1.8
SYNGAP1-221ENST00000637490 ZEB1P37275 1124 aaPredicted RBP3.8□□□□□ -1.8
SYNGAP1-221ENST00000637490 CDK11AQ9UQ88 783 aaPredicted RBP3.8□□□□□ -1.8
SYNGAP1-221ENST00000637490 KCNA4P22459 653 aa3.79□□□□□ -1.8
SYNGAP1-221ENST00000637490 BRD2P25440 801 aaKnown RBP3.79□□□□□ -1.8
SYNGAP1-221ENST00000637490 C14orf37Q86TY3 774 aa3.79□□□□□ -1.8
SYNGAP1-221ENST00000637490 CSRNP3Q8WYN3 585 aa3.79□□□□□ -1.8
SYNGAP1-221ENST00000637490 ANO8Q9HCE9 1232 aaPredicted RBP3.79□□□□□ -1.8
SYNGAP1-221ENST00000637490 FGD1P98174 961 aa3.78□□□□□ -1.8
SYNGAP1-221ENST00000637490 TPRNQ4KMQ1 711 aa3.78□□□□□ -1.8
SYNGAP1-221ENST00000637490 ZNF326Q5BKZ1 582 aaKnown RBP3.78□□□□□ -1.8
SYNGAP1-221ENST00000637490 CLSPNQ9HAW4 1339 aa3.76□□□□□ -1.81
SYNGAP1-221ENST00000637490 GLIPR1L2Q4G1C9 344 aa3.76□□□□□ -1.81
SYNGAP1-221ENST00000637490 HMGB1P09429 215 aaKnown RBP3.74□□□□□ -1.81
SYNGAP1-221ENST00000637490 CNKSR2Q8WXI2 1034 aa3.74□□□□□ -1.81
SYNGAP1-221ENST00000637490 HSP90B1P14625 803 aaKnown RBP3.73□□□□□ -1.81
SYNGAP1-221ENST00000637490 CDK11BP21127 795 aaKnown RBP3.73□□□□□ -1.81
SYNGAP1-221ENST00000637490 CHMP4AQ9BY43 222 aa3.73□□□□□ -1.81
SYNGAP1-221ENST00000637490 RSPH4AQ5TD94 716 aa3.72□□□□□ -1.81
SYNGAP1-221ENST00000637490 PPARGC1BQ86YN6 1023 aaKnown RBP3.72□□□□□ -1.81
SYNGAP1-221ENST00000637490 LOC105371045A0A1W2PR82 267 aa3.71□□□□□ -1.82
SYNGAP1-221ENST00000637490 NEUROD1Q13562 356 aa3.71□□□□□ -1.82
SYNGAP1-221ENST00000637490 BCL11BQ9C0K0 894 aaPredicted RBP3.71□□□□□ -1.82
SYNGAP1-221ENST00000637490 RSPH6AQ9H0K4 717 aa3.71□□□□□ -1.82
SYNGAP1-221ENST00000637490 BCCIPQ9P287 314 aaKnown RBP eCLIP3.71□□□□□ -1.82
SYNGAP1-221ENST00000637490 AAMPQ13685 434 aa3.7□□□□□ -1.82
SYNGAP1-221ENST00000637490 TMEM132AQ24JP5 1023 aa3.7□□□□□ -1.82
SYNGAP1-221ENST00000637490 CHIC1Q5VXU3 224 aa3.7□□□□□ -1.82
SYNGAP1-221ENST00000637490 SAMD1Q6SPF0 538 aaPredicted RBP3.7□□□□□ -1.82
SYNGAP1-221ENST00000637490 SALL2Q9Y467 1007 aaPredicted RBP3.69□□□□□ -1.82
SYNGAP1-221ENST00000637490 SHROOM4Q9ULL8 1493 aa3.68□□□□□ -1.82
SYNGAP1-221ENST00000637490 HAP1P54257 671 aaPredicted RBP3.68□□□□□ -1.82
SYNGAP1-221ENST00000637490 PLCB2Q00722 1185 aa3.67□□□□□ -1.82
SYNGAP1-221ENST00000637490 TRIM26Q12899 539 aaPredicted RBP3.67□□□□□ -1.82
SYNGAP1-221ENST00000637490 DHX37Q8IY37 1157 aaKnown RBP3.66□□□□□ -1.82
SYNGAP1-221ENST00000637490 NAP1L5Q96NT1 182 aaPredicted RBP3.66□□□□□ -1.82
SYNGAP1-221ENST00000637490 ARID3AQ99856 593 aa3.65□□□□□ -1.83
SYNGAP1-221ENST00000637490 RBM10P98175 930 aaKnown RBP3.64□□□□□ -1.83
SYNGAP1-221ENST00000637490 AEBP2Q6ZN18 517 aaPredicted RBP3.63□□□□□ -1.83
SYNGAP1-221ENST00000637490 CCDC136Q96JN2 1154 aa3.63□□□□□ -1.83
SYNGAP1-221ENST00000637490 ZMYND15Q9H091 742 aa3.63□□□□□ -1.83
SYNGAP1-221ENST00000637490 DCAF1Q9Y4B6 1507 aa3.63□□□□□ -1.83
SYNGAP1-221ENST00000637490 A0A0U1RQG5 324 aaPredicted RBP3.62□□□□□ -1.83
SYNGAP1-221ENST00000637490 DEKP35659 375 aaKnown RBP3.62□□□□□ -1.83
SYNGAP1-221ENST00000637490 YTHDC1Q96MU7 727 aaKnown RBP3.62□□□□□ -1.83
SYNGAP1-221ENST00000637490 CCDC180Q9P1Z9 1646 aa3.62□□□□□ -1.83
SYNGAP1-221ENST00000637490 TSHZ2Q9NRE2 1034 aa3.61□□□□□ -1.83
SYNGAP1-221ENST00000637490 PAXIP1Q6ZW49 1069 aaPredicted RBP3.6□□□□□ -1.83
SYNGAP1-221ENST00000637490 PUS7Q96PZ0 661 aaKnown RBP3.6□□□□□ -1.83
SYNGAP1-221ENST00000637490 CCDC9Q9Y3X0 531 aaKnown RBP3.6□□□□□ -1.83
SYNGAP1-221ENST00000637490 CLSTN1O94985 981 aa3.59□□□□□ -1.83
SYNGAP1-221ENST00000637490 TEX2Q8IWB9 1127 aa3.59□□□□□ -1.83
SYNGAP1-221ENST00000637490 VSIG10Q8N0Z9 540 aa3.59□□□□□ -1.83
SYNGAP1-221ENST00000637490 POLR3GLQ9BT43 218 aa3.59□□□□□ -1.83
SYNGAP1-221ENST00000637490 PCGF6Q9BYE7 350 aa3.59□□□□□ -1.83
SYNGAP1-221ENST00000637490 SUPT5HO00267 1087 aaKnown RBP3.58□□□□□ -1.84
SYNGAP1-221ENST00000637490 NCLP19338 710 aaKnown RBP3.58□□□□□ -1.84
SYNGAP1-221ENST00000637490 TICAM2Q86XR7 235 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms