RNA–Protein interactions for RNA: ENST00000637189.1

CHRNA7-225, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 2

Gene CHRNA7, Length 6,181 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-225ENST00000637189 ADGRG4Q8IZF6 3080 aa6.98□□□□□ -1.29
CHRNA7-225ENST00000637189 TACC2O95359 2948 aa6.97□□□□□ -1.29
CHRNA7-225ENST00000637189 TNP1P09430 55 aa6.97□□□□□ -1.29
CHRNA7-225ENST00000637189 FRYLO94915 3013 aa6.95□□□□□ -1.3
CHRNA7-225ENST00000637189 P0C880 135 aa6.94□□□□□ -1.3
CHRNA7-225ENST00000637189 CFAP47Q6ZTR5 3102 aa6.93□□□□□ -1.3
CHRNA7-225ENST00000637189 ITPR1Q14643 2758 aa6.93□□□□□ -1.3
CHRNA7-225ENST00000637189 COL12A1Q99715 3063 aa6.93□□□□□ -1.3
CHRNA7-225ENST00000637189 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
CHRNA7-225ENST00000637189 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
CHRNA7-225ENST00000637189 REV3LO60673 3130 aa6.9□□□□□ -1.31
CHRNA7-225ENST00000637189 KRTAP10-8P60410 259 aa6.9□□□□□ -1.31
CHRNA7-225ENST00000637189 BAHCC1Q9P281 2608 aa6.87□□□□□ -1.31
CHRNA7-225ENST00000637189 H0YAA0 97 aa6.87□□□□□ -1.31
CHRNA7-225ENST00000637189 NSD1Q96L73 2696 aaPredicted RBP6.86□□□□□ -1.31
CHRNA7-225ENST00000637189 SPEGQ15772 3267 aa6.86□□□□□ -1.31
CHRNA7-225ENST00000637189 UTP20O75691 2785 aaKnown RBP6.84□□□□□ -1.32
CHRNA7-225ENST00000637189 APCP25054 2843 aa6.83□□□□□ -1.32
CHRNA7-225ENST00000637189 FLNCQ14315 2725 aa6.81□□□□□ -1.32
CHRNA7-225ENST00000637189 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
CHRNA7-225ENST00000637189 HIVEP1P15822 2718 aa6.8□□□□□ -1.32
CHRNA7-225ENST00000637189 A0A1B0GVY2 172 aa6.8□□□□□ -1.32
CHRNA7-225ENST00000637189 SPTBN5Q9NRC6 3674 aaKnown RBP6.79□□□□□ -1.32
CHRNA7-225ENST00000637189 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
CHRNA7-225ENST00000637189 CRYBG3Q68DQ2 2970 aa6.76□□□□□ -1.33
CHRNA7-225ENST00000637189 EYSQ5T1H1 3165 aa6.73□□□□□ -1.33
CHRNA7-225ENST00000637189 USP34Q70CQ2 3546 aa6.73□□□□□ -1.33
CHRNA7-225ENST00000637189 CELSR2Q9HCU4 2923 aa6.71□□□□□ -1.34
CHRNA7-225ENST00000637189 KMT2BQ9UMN6 2715 aaPredicted RBP6.67□□□□□ -1.34
CHRNA7-225ENST00000637189 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
CHRNA7-225ENST00000637189 XP32Q5T750 250 aa6.65□□□□□ -1.34
CHRNA7-225ENST00000637189 MYO15AQ9UKN7 3530 aa6.62□□□□□ -1.35
CHRNA7-225ENST00000637189 LOC400499M0QZD8 3231 aa6.61□□□□□ -1.35
CHRNA7-225ENST00000637189 DCHS2Q6V1P9 2916 aa6.61□□□□□ -1.35
CHRNA7-225ENST00000637189 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
CHRNA7-225ENST00000637189 ZANQ9Y493 2812 aa6.59□□□□□ -1.35
CHRNA7-225ENST00000637189 TNRC18O15417 2968 aaPredicted RBP6.58□□□□□ -1.36
CHRNA7-225ENST00000637189 NIPBLQ6KC79 2804 aaeCLIP6.57□□□□□ -1.36
CHRNA7-225ENST00000637189 TENM4Q6N022 2769 aa6.55□□□□□ -1.36
CHRNA7-225ENST00000637189 KRTAP21-3Q3LHN1 58 aa6.54□□□□□ -1.36
CHRNA7-225ENST00000637189 KRTAP10-10P60014 251 aa6.52□□□□□ -1.36
CHRNA7-225ENST00000637189 HRNRQ86YZ3 2850 aaPredicted RBP6.52□□□□□ -1.37
CHRNA7-225ENST00000637189 FBN2P35556 2912 aa6.5□□□□□ -1.37
CHRNA7-225ENST00000637189 TPRXLQ17RH7 258 aa6.46□□□□□ -1.38
CHRNA7-225ENST00000637189 WDFY3Q8IZQ1 3526 aa6.44□□□□□ -1.38
CHRNA7-225ENST00000637189 NF1P21359 2839 aa6.39□□□□□ -1.39
CHRNA7-225ENST00000637189 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
CHRNA7-225ENST00000637189 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
CHRNA7-225ENST00000637189 PRO2289Q9P1D8 64 aa6.38□□□□□ -1.39
CHRNA7-225ENST00000637189 RELNP78509 3460 aa6.38□□□□□ -1.39
CHRNA7-225ENST00000637189 CELSR1Q9NYQ6 3014 aa6.35□□□□□ -1.39
CHRNA7-225ENST00000637189 ASPMQ8IZT6 3477 aa6.33□□□□□ -1.4
CHRNA7-225ENST00000637189 DCHS1Q96JQ0 3298 aa6.3□□□□□ -1.4
CHRNA7-225ENST00000637189 ZFHX4Q86UP3 3567 aa6.3□□□□□ -1.4
CHRNA7-225ENST00000637189 TENM1Q9UKZ4 2725 aa6.29□□□□□ -1.4
CHRNA7-225ENST00000637189 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
CHRNA7-225ENST00000637189 TENM2Q9NT68 2774 aa6.22□□□□□ -1.41
CHRNA7-225ENST00000637189 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
CHRNA7-225ENST00000637189 MXRA5Q9NR99 2828 aa6.22□□□□□ -1.41
CHRNA7-225ENST00000637189 TGP01266 2768 aa6.21□□□□□ -1.42
CHRNA7-225ENST00000637189 LAMA5O15230 3695 aa6.21□□□□□ -1.42
CHRNA7-225ENST00000637189 KRTAP15-1Q3LI76 137 aa6.19□□□□□ -1.42
CHRNA7-225ENST00000637189 KRTAP13-4Q3LI77 160 aa6.17□□□□□ -1.42
CHRNA7-225ENST00000637189 KRTAP12-1P59990 96 aa6.16□□□□□ -1.42
CHRNA7-225ENST00000637189 INE1O15225 51 aa6.15□□□□□ -1.42
CHRNA7-225ENST00000637189 PKD1L1Q8TDX9 2849 aa6.12□□□□□ -1.43
CHRNA7-225ENST00000637189 NBPF19A0A087WUL8 3843 aa6.1□□□□□ -1.43
CHRNA7-225ENST00000637189 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
CHRNA7-225ENST00000637189 VWFP04275 2813 aa6.05□□□□□ -1.44
CHRNA7-225ENST00000637189 DMDP11532 3685 aa6.04□□□□□ -1.44
CHRNA7-225ENST00000637189 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
CHRNA7-225ENST00000637189 PDZD2O15018 2839 aa6.02□□□□□ -1.45
CHRNA7-225ENST00000637189 SVEP1Q4LDE5 3571 aa5.98□□□□□ -1.45
CHRNA7-225ENST00000637189 FBN1P35555 2871 aaKnown RBP5.92□□□□□ -1.46
CHRNA7-225ENST00000637189 CUBNO60494 3623 aa5.91□□□□□ -1.46
CHRNA7-225ENST00000637189 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.47
CHRNA7-225ENST00000637189 MUC3AQ02505 3323 aa5.89□□□□□ -1.47
CHRNA7-225ENST00000637189 ZFHX3Q15911 3703 aa5.88□□□□□ -1.47
CHRNA7-225ENST00000637189 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
CHRNA7-225ENST00000637189 CSMD2Q7Z408 3487 aa5.83□□□□□ -1.48
CHRNA7-225ENST00000637189 ANK3Q12955 4377 aaKnown RBP5.81□□□□□ -1.48
CHRNA7-225ENST00000637189 OTOGQ6ZRI0 2925 aa5.79□□□□□ -1.48
CHRNA7-225ENST00000637189 SPENQ96T58 3664 aaKnown RBP5.79□□□□□ -1.48
CHRNA7-225ENST00000637189 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
CHRNA7-225ENST00000637189 SRRM2Q9UQ35 2752 aaKnown RBP5.73□□□□□ -1.49
CHRNA7-225ENST00000637189 TRRAPQ9Y4A5 3859 aa5.71□□□□□ -1.5
CHRNA7-225ENST00000637189 MEGF8Q7Z7M0 2845 aa5.71□□□□□ -1.5
CHRNA7-225ENST00000637189 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
CHRNA7-225ENST00000637189 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
CHRNA7-225ENST00000637189 COL7A1Q02388 2944 aa5.62□□□□□ -1.51
CHRNA7-225ENST00000637189 KRTAP3-3Q9BYR6 98 aa5.62□□□□□ -1.51
CHRNA7-225ENST00000637189 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
CHRNA7-225ENST00000637189 BSNQ9UPA5 3926 aa5.6□□□□□ -1.51
CHRNA7-225ENST00000637189 HUWE1Q7Z6Z7 4374 aaKnown RBP5.53□□□□□ -1.52
CHRNA7-225ENST00000637189 VPS13CQ709C8 3753 aa5.51□□□□□ -1.53
CHRNA7-225ENST00000637189 KRTAP4-5Q9BYR2 181 aa5.5□□□□□ -1.53
CHRNA7-225ENST00000637189 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
CHRNA7-225ENST00000637189 KRTAP12-3P60328 96 aa5.49□□□□□ -1.53
CHRNA7-225ENST00000637189 LCE3AQ5TA76 89 aa5.47□□□□□ -1.53
CHRNA7-225ENST00000637189 KRTAP10-4P60372 401 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms