RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 COL6A5A8TX70 2615 aa5.17□□□□□ -1.58
SPTAN1-228ENST00000635853 KRTAP15-1Q3LI76 137 aa5.17□□□□□ -1.58
SPTAN1-228ENST00000635853 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
SPTAN1-228ENST00000635853 CENPEQ02224 2701 aa5.15□□□□□ -1.58
SPTAN1-228ENST00000635853 NOTCH1P46531 2555 aa5.12□□□□□ -1.59
SPTAN1-228ENST00000635853 FRYQ5TBA9 3013 aa5.12□□□□□ -1.59
SPTAN1-228ENST00000635853 LAMA1P25391 3075 aa5.12□□□□□ -1.59
SPTAN1-228ENST00000635853 ZFHX4Q86UP3 3567 aa5.11□□□□□ -1.59
SPTAN1-228ENST00000635853 ZFHX3Q15911 3703 aa5.11□□□□□ -1.59
SPTAN1-228ENST00000635853 ZNF292O60281 2723 aa5.11□□□□□ -1.59
SPTAN1-228ENST00000635853 DMXL1Q9Y485 3027 aa5.11□□□□□ -1.59
SPTAN1-228ENST00000635853 LOC400499M0QZD8 3231 aa5.09□□□□□ -1.59
SPTAN1-228ENST00000635853 CELSR3Q9NYQ7 3312 aa5.08□□□□□ -1.6
SPTAN1-228ENST00000635853 DSPP15924 2871 aaKnown RBP5.07□□□□□ -1.6
SPTAN1-228ENST00000635853 MGAQ8IWI9 3026 aa5.07□□□□□ -1.6
SPTAN1-228ENST00000635853 KALRNO60229 2985 aa5.07□□□□□ -1.6
SPTAN1-228ENST00000635853 LAMA5O15230 3695 aa5.07□□□□□ -1.6
SPTAN1-228ENST00000635853 DMBT1Q9UGM3 2413 aaPredicted RBP5.06□□□□□ -1.6
SPTAN1-228ENST00000635853 CFAP47Q6ZTR5 3102 aa5.06□□□□□ -1.6
SPTAN1-228ENST00000635853 AKAP13Q12802 2813 aa5.06□□□□□ -1.6
SPTAN1-228ENST00000635853 FREM2Q5SZK8 3169 aa5.05□□□□□ -1.6
SPTAN1-228ENST00000635853 UNC79Q9P2D8 2635 aa5.05□□□□□ -1.6
SPTAN1-228ENST00000635853 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
SPTAN1-228ENST00000635853 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
SPTAN1-228ENST00000635853 IGSF10Q6WRI0 2623 aa5.02□□□□□ -1.61
SPTAN1-228ENST00000635853 KRTAP12-2P59991 146 aa5.02□□□□□ -1.61
SPTAN1-228ENST00000635853 GCN1Q92616 2671 aaKnown RBP5.01□□□□□ -1.61
SPTAN1-228ENST00000635853 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
SPTAN1-228ENST00000635853 MAP1AP78559 2803 aaPredicted RBP5.01□□□□□ -1.61
SPTAN1-228ENST00000635853 ITPR1Q14643 2758 aa4.98□□□□□ -1.61
SPTAN1-228ENST00000635853 SMG1Q96Q15 3661 aaKnown RBP4.98□□□□□ -1.61
SPTAN1-228ENST00000635853 STAB2Q8WWQ8 2551 aa4.98□□□□□ -1.61
SPTAN1-228ENST00000635853 LRBAP50851 2863 aa4.96□□□□□ -1.62
SPTAN1-228ENST00000635853 NBEAL2Q6ZNJ1 2754 aa4.93□□□□□ -1.62
SPTAN1-228ENST00000635853 KRTAP12-1P59990 96 aa4.92□□□□□ -1.62
SPTAN1-228ENST00000635853 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
SPTAN1-228ENST00000635853 TACC2O95359 2948 aa4.89□□□□□ -1.63
SPTAN1-228ENST00000635853 ITPR2Q14571 2701 aa4.88□□□□□ -1.63
SPTAN1-228ENST00000635853 COL12A1Q99715 3063 aa4.87□□□□□ -1.63
SPTAN1-228ENST00000635853 UBR5O95071 2799 aaPredicted RBP4.86□□□□□ -1.63
SPTAN1-228ENST00000635853 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
SPTAN1-228ENST00000635853 DMXL2Q8TDJ6 3036 aa4.84□□□□□ -1.63
SPTAN1-228ENST00000635853 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.63
SPTAN1-228ENST00000635853 KMT2BQ9UMN6 2715 aaPredicted RBP4.84□□□□□ -1.64
SPTAN1-228ENST00000635853 KRTAP10-6P60371 365 aaPredicted RBP4.84□□□□□ -1.64
SPTAN1-228ENST00000635853 HRNRQ86YZ3 2850 aaPredicted RBP4.83□□□□□ -1.64
SPTAN1-228ENST00000635853 ADGRG4Q8IZF6 3080 aa4.82□□□□□ -1.64
SPTAN1-228ENST00000635853 SPENQ96T58 3664 aaKnown RBP4.81□□□□□ -1.64
SPTAN1-228ENST00000635853 ALMS1Q8TCU4 4167 aa4.8□□□□□ -1.64
SPTAN1-228ENST00000635853 TENM4Q6N022 2769 aa4.8□□□□□ -1.64
SPTAN1-228ENST00000635853 INE1O15225 51 aa4.79□□□□□ -1.64
SPTAN1-228ENST00000635853 ATMQ13315 3056 aa4.78□□□□□ -1.64
SPTAN1-228ENST00000635853 APCP25054 2843 aa4.78□□□□□ -1.64
SPTAN1-228ENST00000635853 CSMD1Q96PZ7 3565 aa4.78□□□□□ -1.64
SPTAN1-228ENST00000635853 BOD1L1Q8NFC6 3051 aa4.76□□□□□ -1.65
SPTAN1-228ENST00000635853 UTP20O75691 2785 aaKnown RBP4.75□□□□□ -1.65
SPTAN1-228ENST00000635853 RELNP78509 3460 aa4.75□□□□□ -1.65
SPTAN1-228ENST00000635853 FLNCQ14315 2725 aa4.73□□□□□ -1.65
SPTAN1-228ENST00000635853 HIVEP1P15822 2718 aa4.72□□□□□ -1.65
SPTAN1-228ENST00000635853 KRTAP3-2Q9BYR7 98 aa4.69□□□□□ -1.66
SPTAN1-228ENST00000635853 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
SPTAN1-228ENST00000635853 CRYBG3Q68DQ2 2970 aa4.63□□□□□ -1.67
SPTAN1-228ENST00000635853 BSNQ9UPA5 3926 aa4.63□□□□□ -1.67
SPTAN1-228ENST00000635853 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
SPTAN1-228ENST00000635853 ASH1LQ9NR48 2969 aaKnown RBP4.61□□□□□ -1.67
SPTAN1-228ENST00000635853 CSMD2Q7Z408 3487 aa4.6□□□□□ -1.67
SPTAN1-228ENST00000635853 TGP01266 2768 aa4.57□□□□□ -1.68
SPTAN1-228ENST00000635853 NIPBLQ6KC79 2804 aaeCLIP4.52□□□□□ -1.69
SPTAN1-228ENST00000635853 NBPF19A0A087WUL8 3843 aa4.52□□□□□ -1.69
SPTAN1-228ENST00000635853 DCHS2Q6V1P9 2916 aa4.52□□□□□ -1.69
SPTAN1-228ENST00000635853 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
SPTAN1-228ENST00000635853 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
SPTAN1-228ENST00000635853 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
SPTAN1-228ENST00000635853 TENM3Q9P273 2699 aa4.45□□□□□ -1.7
SPTAN1-228ENST00000635853 CELSR2Q9HCU4 2923 aa4.44□□□□□ -1.7
SPTAN1-228ENST00000635853 VPS13CQ709C8 3753 aa4.44□□□□□ -1.7
SPTAN1-228ENST00000635853 TENM2Q9NT68 2774 aa4.43□□□□□ -1.7
SPTAN1-228ENST00000635853 FBN2P35556 2912 aa4.43□□□□□ -1.7
SPTAN1-228ENST00000635853 TENM1Q9UKZ4 2725 aa4.43□□□□□ -1.7
SPTAN1-228ENST00000635853 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
SPTAN1-228ENST00000635853 ZANQ9Y493 2812 aa4.4□□□□□ -1.7
SPTAN1-228ENST00000635853 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
SPTAN1-228ENST00000635853 NF1P21359 2839 aa4.39□□□□□ -1.71
SPTAN1-228ENST00000635853 MXRA5Q9NR99 2828 aa4.38□□□□□ -1.71
SPTAN1-228ENST00000635853 AKAP9Q99996 3911 aa4.36□□□□□ -1.71
SPTAN1-228ENST00000635853 ZNF469Q96JG9 3925 aaPredicted RBP4.34□□□□□ -1.72
SPTAN1-228ENST00000635853 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
SPTAN1-228ENST00000635853 PKD1L1Q8TDX9 2849 aa4.26□□□□□ -1.73
SPTAN1-228ENST00000635853 OTOGQ6ZRI0 2925 aa4.26□□□□□ -1.73
SPTAN1-228ENST00000635853 HUWE1Q7Z6Z7 4374 aaKnown RBP4.25□□□□□ -1.73
SPTAN1-228ENST00000635853 KRTAP8-1Q8IUC2 63 aa4.24□□□□□ -1.73
SPTAN1-228ENST00000635853 CUBNO60494 3623 aa4.23□□□□□ -1.73
SPTAN1-228ENST00000635853 PDZD2O15018 2839 aa4.23□□□□□ -1.73
SPTAN1-228ENST00000635853 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
SPTAN1-228ENST00000635853 KRTAP10-5P60370 271 aa4.23□□□□□ -1.73
SPTAN1-228ENST00000635853 LORP23490 312 aaPredicted RBP4.21□□□□□ -1.74
SPTAN1-228ENST00000635853 SRRM2Q9UQ35 2752 aaKnown RBP4.21□□□□□ -1.74
SPTAN1-228ENST00000635853 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
SPTAN1-228ENST00000635853 KRTAP4-5Q9BYR2 181 aa4.16□□□□□ -1.74
SPTAN1-228ENST00000635853 VWFP04275 2813 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms