RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 COL12A1Q99715 3063 aa7□□□□□ -1.29
SCN8A-209ENST00000627620 ASH1LQ9NR48 2969 aaKnown RBP6.97□□□□□ -1.29
SCN8A-209ENST00000627620 TENM4Q6N022 2769 aa6.97□□□□□ -1.29
SCN8A-209ENST00000627620 FRYLO94915 3013 aa6.94□□□□□ -1.3
SCN8A-209ENST00000627620 LRBAP50851 2863 aa6.93□□□□□ -1.3
SCN8A-209ENST00000627620 TNP1P09430 55 aa6.93□□□□□ -1.3
SCN8A-209ENST00000627620 CRYBG3Q68DQ2 2970 aa6.91□□□□□ -1.3
SCN8A-209ENST00000627620 KRTAP16-1A8MUX0 517 aa6.9□□□□□ -1.3
SCN8A-209ENST00000627620 LAMA1P25391 3075 aa6.9□□□□□ -1.3
SCN8A-209ENST00000627620 ADGRG4Q8IZF6 3080 aa6.9□□□□□ -1.31
SCN8A-209ENST00000627620 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
SCN8A-209ENST00000627620 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
SCN8A-209ENST00000627620 NBEAQ8NFP9 2946 aa6.88□□□□□ -1.31
SCN8A-209ENST00000627620 BOD1L1Q8NFC6 3051 aa6.87□□□□□ -1.31
SCN8A-209ENST00000627620 VCANP13611 3396 aa6.86□□□□□ -1.31
SCN8A-209ENST00000627620 XP32Q5T750 250 aa6.86□□□□□ -1.31
SCN8A-209ENST00000627620 SZT2Q5T011 3432 aa6.86□□□□□ -1.31
SCN8A-209ENST00000627620 CELSR2Q9HCU4 2923 aa6.85□□□□□ -1.31
SCN8A-209ENST00000627620 NDUFAF8A1L188 74 aa6.84□□□□□ -1.31
SCN8A-209ENST00000627620 COL6A3P12111 3177 aa6.8□□□□□ -1.32
SCN8A-209ENST00000627620 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
SCN8A-209ENST00000627620 ZZEF1O43149 2961 aa6.8□□□□□ -1.32
SCN8A-209ENST00000627620 DNAH14Q0VDD8 3507 aa6.78□□□□□ -1.32
SCN8A-209ENST00000627620 A0A1B0GVY2 172 aa6.77□□□□□ -1.33
SCN8A-209ENST00000627620 DCHS2Q6V1P9 2916 aa6.77□□□□□ -1.33
SCN8A-209ENST00000627620 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
SCN8A-209ENST00000627620 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
SCN8A-209ENST00000627620 EYSQ5T1H1 3165 aa6.75□□□□□ -1.33
SCN8A-209ENST00000627620 TPRXLQ17RH7 258 aa6.71□□□□□ -1.33
SCN8A-209ENST00000627620 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
SCN8A-209ENST00000627620 ZANQ9Y493 2812 aa6.69□□□□□ -1.34
SCN8A-209ENST00000627620 H0YAA0 97 aa6.67□□□□□ -1.34
SCN8A-209ENST00000627620 TENM3Q9P273 2699 aa6.63□□□□□ -1.35
SCN8A-209ENST00000627620 KRTAP10-10P60014 251 aa6.62□□□□□ -1.35
SCN8A-209ENST00000627620 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
SCN8A-209ENST00000627620 TENM1Q9UKZ4 2725 aa6.6□□□□□ -1.35
SCN8A-209ENST00000627620 NF1P21359 2839 aa6.58□□□□□ -1.36
SCN8A-209ENST00000627620 USP34Q70CQ2 3546 aa6.57□□□□□ -1.36
SCN8A-209ENST00000627620 HRNRQ86YZ3 2850 aaPredicted RBP6.56□□□□□ -1.36
SCN8A-209ENST00000627620 P0C880 135 aa6.55□□□□□ -1.36
SCN8A-209ENST00000627620 SPEGQ15772 3267 aa6.55□□□□□ -1.36
SCN8A-209ENST00000627620 TENM2Q9NT68 2774 aa6.54□□□□□ -1.36
SCN8A-209ENST00000627620 FBN2P35556 2912 aa6.54□□□□□ -1.36
SCN8A-209ENST00000627620 TNRC18O15417 2968 aaPredicted RBP6.53□□□□□ -1.36
SCN8A-209ENST00000627620 PRO2289Q9P1D8 64 aa6.51□□□□□ -1.37
SCN8A-209ENST00000627620 DMXL1Q9Y485 3027 aa6.5□□□□□ -1.37
SCN8A-209ENST00000627620 SPTBN5Q9NRC6 3674 aaKnown RBP6.49□□□□□ -1.37
SCN8A-209ENST00000627620 TGP01266 2768 aa6.43□□□□□ -1.38
SCN8A-209ENST00000627620 CELSR1Q9NYQ6 3014 aa6.41□□□□□ -1.38
SCN8A-209ENST00000627620 PKD1L1Q8TDX9 2849 aa6.36□□□□□ -1.39
SCN8A-209ENST00000627620 MXRA5Q9NR99 2828 aa6.36□□□□□ -1.39
SCN8A-209ENST00000627620 LOC400499M0QZD8 3231 aa6.35□□□□□ -1.39
SCN8A-209ENST00000627620 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
SCN8A-209ENST00000627620 MYO15AQ9UKN7 3530 aa6.29□□□□□ -1.4
SCN8A-209ENST00000627620 VWFP04275 2813 aa6.27□□□□□ -1.41
SCN8A-209ENST00000627620 PDZD2O15018 2839 aa6.23□□□□□ -1.41
SCN8A-209ENST00000627620 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
SCN8A-209ENST00000627620 WDFY3Q8IZQ1 3526 aa6.18□□□□□ -1.42
SCN8A-209ENST00000627620 KRTAP12-1P59990 96 aa6.17□□□□□ -1.42
SCN8A-209ENST00000627620 DCHS1Q96JQ0 3298 aa6.16□□□□□ -1.42
SCN8A-209ENST00000627620 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
SCN8A-209ENST00000627620 RELNP78509 3460 aa6.15□□□□□ -1.43
SCN8A-209ENST00000627620 FBN1P35555 2871 aaKnown RBP6.02□□□□□ -1.45
SCN8A-209ENST00000627620 SRRM2Q9UQ35 2752 aaKnown RBP6□□□□□ -1.45
SCN8A-209ENST00000627620 NBPF19A0A087WUL8 3843 aa6□□□□□ -1.45
SCN8A-209ENST00000627620 ASPMQ8IZT6 3477 aa5.98□□□□□ -1.45
SCN8A-209ENST00000627620 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
SCN8A-209ENST00000627620 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
SCN8A-209ENST00000627620 OTOGQ6ZRI0 2925 aa5.95□□□□□ -1.46
SCN8A-209ENST00000627620 ZFHX4Q86UP3 3567 aa5.91□□□□□ -1.46
SCN8A-209ENST00000627620 FBN3Q75N90 2809 aa5.91□□□□□ -1.46
SCN8A-209ENST00000627620 LAMA5O15230 3695 aa5.9□□□□□ -1.47
SCN8A-209ENST00000627620 MT1HL1P0DM35 61 aa5.88□□□□□ -1.47
SCN8A-209ENST00000627620 ZFHX3Q15911 3703 aa5.88□□□□□ -1.47
SCN8A-209ENST00000627620 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
SCN8A-209ENST00000627620 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.47
SCN8A-209ENST00000627620 CSMD1Q96PZ7 3565 aa5.82□□□□□ -1.48
SCN8A-209ENST00000627620 COL7A1Q02388 2944 aa5.77□□□□□ -1.49
SCN8A-209ENST00000627620 KRTAP3-3Q9BYR6 98 aa5.75□□□□□ -1.49
SCN8A-209ENST00000627620 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
SCN8A-209ENST00000627620 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
SCN8A-209ENST00000627620 KRTAP4-5Q9BYR2 181 aa5.7□□□□□ -1.5
SCN8A-209ENST00000627620 SMG1Q96Q15 3661 aaKnown RBP5.69□□□□□ -1.5
SCN8A-209ENST00000627620 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
SCN8A-209ENST00000627620 DMDP11532 3685 aa5.68□□□□□ -1.5
SCN8A-209ENST00000627620 CRCT1Q9UGL9 99 aa5.65□□□□□ -1.5
SCN8A-209ENST00000627620 TRRAPQ9Y4A5 3859 aa5.64□□□□□ -1.51
SCN8A-209ENST00000627620 CSMD2Q7Z408 3487 aa5.64□□□□□ -1.51
SCN8A-209ENST00000627620 SVEP1Q4LDE5 3571 aa5.61□□□□□ -1.51
SCN8A-209ENST00000627620 MUC3AQ02505 3323 aa5.58□□□□□ -1.52
SCN8A-209ENST00000627620 HUWE1Q7Z6Z7 4374 aaKnown RBP5.57□□□□□ -1.52
SCN8A-209ENST00000627620 SPENQ96T58 3664 aaKnown RBP5.56□□□□□ -1.52
SCN8A-209ENST00000627620 INE1O15225 51 aa5.55□□□□□ -1.52
SCN8A-209ENST00000627620 KRTAP12-3P60328 96 aa5.55□□□□□ -1.52
SCN8A-209ENST00000627620 CUBNO60494 3623 aa5.53□□□□□ -1.52
SCN8A-209ENST00000627620 LCE3AQ5TA76 89 aa5.48□□□□□ -1.53
SCN8A-209ENST00000627620 LORP23490 312 aaPredicted RBP5.46□□□□□ -1.54
SCN8A-209ENST00000627620 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
SCN8A-209ENST00000627620 ALMS1Q8TCU4 4167 aa5.44□□□□□ -1.54
SCN8A-209ENST00000627620 BSNQ9UPA5 3926 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms