RNA–Protein interactions for RNA: ENST00000622140.1

DDX52-216, Transcript of DExD-box helicase 52, humanhuman

TSL 3

Gene DDX52, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-216ENST00000622140 NOTCH1P46531 2555 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 SPTA1P02549 2419 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 EP300Q09472 2414 aaPredicted RBP0.67□□□□□ -2.3
DDX52-216ENST00000622140 DEFB136Q30KP8 78 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 CHD6Q8TD26 2715 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 FBN2P35556 2912 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 NCOR2Q9Y618 2525 aa0.67□□□□□ -2.3
DDX52-216ENST00000622140 H3BNG1 76 aa0.66□□□□□ -2.3
DDX52-216ENST00000622140 DEFB110Q30KQ9 67 aa0.66□□□□□ -2.3
DDX52-216ENST00000622140 UBR5O95071 2799 aaPredicted RBP0.66□□□□□ -2.3
DDX52-216ENST00000622140 NBASA2RRP1 2371 aa0.65□□□□□ -2.3
DDX52-216ENST00000622140 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.3
DDX52-216ENST00000622140 SPTBN4Q9H254 2564 aa0.65□□□□□ -2.3
DDX52-216ENST00000622140 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 KRTAP2-3P0C7H8 128 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 DEFB124Q8NES8 71 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 DEFB108BQ8NET1 73 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 KRTAP2-4Q9BYR9 128 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 KRTAP2-1Q9BYU5 128 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 TENM2Q9NT68 2774 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 TNRC18O15417 2968 aaPredicted RBP0.65□□□□□ -2.31
DDX52-216ENST00000622140 SPG11Q96JI7 2443 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 USP24Q9UPU5 2620 aa0.65□□□□□ -2.31
DDX52-216ENST00000622140 SMR3AQ99954 134 aa0.64□□□□□ -2.31
DDX52-216ENST00000622140 USP9YO00507 2555 aaPredicted RBP0.64□□□□□ -2.31
DDX52-216ENST00000622140 SPTAN1Q13813 2472 aaKnown RBP0.63□□□□□ -2.31
DDX52-216ENST00000622140 RIF1Q5UIP0 2472 aaKnown RBP0.63□□□□□ -2.31
DDX52-216ENST00000622140 Q9Y3F1 56 aa0.63□□□□□ -2.31
DDX52-216ENST00000622140 NAV2Q8IVL1 2488 aa0.63□□□□□ -2.31
DDX52-216ENST00000622140 CCDC168Q8NDH2 2452 aa0.63□□□□□ -2.31
DDX52-216ENST00000622140 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
DDX52-216ENST00000622140 COL6A5A8TX70 2615 aa0.62□□□□□ -2.31
DDX52-216ENST00000622140 HIVEP3Q5T1R4 2406 aa0.62□□□□□ -2.31
DDX52-216ENST00000622140 GCN1Q92616 2671 aaKnown RBP0.62□□□□□ -2.31
DDX52-216ENST00000622140 APCP25054 2843 aa0.62□□□□□ -2.31
DDX52-216ENST00000622140 MGAQ8IWI9 3026 aa0.62□□□□□ -2.31
DDX52-216ENST00000622140 ITPR3Q14573 2671 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 EPG5Q9HCE0 2579 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 PDZD2O15018 2839 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 DEFB133Q30KQ1 61 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 U3KQA8 63 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 FRAS1Q86XX4 4008 aa0.61□□□□□ -2.31
DDX52-216ENST00000622140 SONP18583 2426 aaKnown RBP0.6□□□□□ -2.31
DDX52-216ENST00000622140 CELSR1Q9NYQ6 3014 aa0.6□□□□□ -2.31
DDX52-216ENST00000622140 A0A096LPF7 62 aa0.6□□□□□ -2.31
DDX52-216ENST00000622140 FLNCQ14315 2725 aa0.6□□□□□ -2.31
DDX52-216ENST00000622140 UTP20O75691 2785 aaKnown RBP0.59□□□□□ -2.31
DDX52-216ENST00000622140 PTPN13Q12923 2485 aa0.59□□□□□ -2.31
DDX52-216ENST00000622140 NSD1Q96L73 2696 aaPredicted RBP0.59□□□□□ -2.31
DDX52-216ENST00000622140 CACNA1AO00555 2505 aa0.59□□□□□ -2.31
DDX52-216ENST00000622140 PRM1P04553 51 aa0.59□□□□□ -2.31
DDX52-216ENST00000622140 NF1P21359 2839 aa0.59□□□□□ -2.32
DDX52-216ENST00000622140 CHD8Q9HCK8 2581 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 NIPBLQ6KC79 2804 aaeCLIP0.58□□□□□ -2.32
DDX52-216ENST00000622140 ZFYVE26Q68DK2 2539 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 LINC01556Q5JQF7 62 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 TNXBP22105 4242 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 CSMD3Q7Z407 3707 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 WDR87Q6ZQQ6 2873 aa0.58□□□□□ -2.32
DDX52-216ENST00000622140 TLN1Q9Y490 2541 aaKnown RBP0.58□□□□□ -2.32
DDX52-216ENST00000622140 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
DDX52-216ENST00000622140 TENM3Q9P273 2699 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 KRTAP8-1Q8IUC2 63 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 ITPR1Q14643 2758 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 HIVEP1P15822 2718 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 LRRK2Q5S007 2527 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 TLN2Q9Y4G6 2542 aa0.57□□□□□ -2.32
DDX52-216ENST00000622140 STAB1Q9NY15 2570 aa0.56□□□□□ -2.32
DDX52-216ENST00000622140 SETXQ7Z333 2677 aaKnown RBP0.56□□□□□ -2.32
DDX52-216ENST00000622140 DOPEY1Q5JWR5 2465 aa0.56□□□□□ -2.32
DDX52-216ENST00000622140 TACC2O95359 2948 aa0.56□□□□□ -2.32
DDX52-216ENST00000622140 ANKRD11Q6UB99 2663 aaPredicted RBP0.56□□□□□ -2.32
DDX52-216ENST00000622140 RANBP2P49792 3224 aaKnown RBP0.56□□□□□ -2.32
DDX52-216ENST00000622140 ACACBO00763 2458 aa0.56□□□□□ -2.32
DDX52-216ENST00000622140 MTORP42345 2549 aa0.56□□□□□ -2.32
DDX52-216ENST00000622140 ANKHD1Q8IWZ3 2542 aaKnown RBP0.56□□□□□ -2.32
DDX52-216ENST00000622140 ACANP16112 2415 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 RPS29P62273 56 aaKnown RBP0.55□□□□□ -2.32
DDX52-216ENST00000622140 USP9XQ93008 2570 aaPredicted RBP0.55□□□□□ -2.32
DDX52-216ENST00000622140 COL7A1Q02388 2944 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 NBEAQ8NFP9 2946 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 FRYLO94915 3013 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 FRYQ5TBA9 3013 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 MYO9AB2RTY4 2548 aa0.55□□□□□ -2.32
DDX52-216ENST00000622140 CFAP54Q96N23 3096 aa0.54□□□□□ -2.32
DDX52-216ENST00000622140 KRTAP19-3Q7Z4W3 81 aa0.54□□□□□ -2.32
DDX52-216ENST00000622140 UNC79Q9P2D8 2635 aa0.53□□□□□ -2.32
DDX52-216ENST00000622140 DMXL1Q9Y485 3027 aa0.53□□□□□ -2.32
DDX52-216ENST00000622140 COL12A1Q99715 3063 aa0.53□□□□□ -2.32
DDX52-216ENST00000622140 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.32
DDX52-216ENST00000622140 FLNBO75369 2602 aaKnown RBP0.53□□□□□ -2.32
DDX52-216ENST00000622140 MAP1AP78559 2803 aaPredicted RBP0.53□□□□□ -2.32
DDX52-216ENST00000622140 LRBAP50851 2863 aa0.53□□□□□ -2.32
DDX52-216ENST00000622140 PRUNE2Q8WUY3 3088 aa0.53□□□□□ -2.33
DDX52-216ENST00000622140 ANK2Q01484 3957 aa0.53□□□□□ -2.33
DDX52-216ENST00000622140 MYO18BQ8IUG5 2567 aa0.52□□□□□ -2.33
DDX52-216ENST00000622140 TEX15Q9BXT5 2789 aa0.52□□□□□ -2.33
DDX52-216ENST00000622140 ZZEF1O43149 2961 aa0.52□□□□□ -2.33
DDX52-216ENST00000622140 CENPFP49454 3210 aa0.52□□□□□ -2.33
DDX52-216ENST00000622140 TEP1Q99973 2627 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms