RNA–Protein interactions for RNA: ENST00000622140.1

DDX52-216, Transcript of DExD-box helicase 52, humanhuman

TSL 3

Gene DDX52, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52-216ENST00000622140 AEBP2Q6ZN18 517 aaPredicted RBP21.55■■□□□ 1.04
DDX52-216ENST00000622140 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
DDX52-216ENST00000622140 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
DDX52-216ENST00000622140 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
DDX52-216ENST00000622140 FOXD1Q16676 465 aa17.3■□□□□ 0.36
DDX52-216ENST00000622140 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
DDX52-216ENST00000622140 MSH5O43196 834 aa16.42■□□□□ 0.22
DDX52-216ENST00000622140 PIAS4Q8N2W9 510 aaPredicted RBP16.09■□□□□ 0.17
DDX52-216ENST00000622140 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
DDX52-216ENST00000622140 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
DDX52-216ENST00000622140 ADRA2BP18089 450 aa15.71■□□□□ 0.11
DDX52-216ENST00000622140 DMRT2Q9Y5R5 561 aa14.58□□□□□ -0.08
DDX52-216ENST00000622140 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
DDX52-216ENST00000622140 CACNB1Q02641 598 aaPredicted RBP14.43□□□□□ -0.1
DDX52-216ENST00000622140 SCAF1Q9H7N4 1312 aaKnown RBP14.41□□□□□ -0.1
DDX52-216ENST00000622140 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
DDX52-216ENST00000622140 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
DDX52-216ENST00000622140 HOXD11P31277 338 aaPredicted RBP13.82□□□□□ -0.2
DDX52-216ENST00000622140 PPP4R3CPQ6ZMV5 832 aa13.75□□□□□ -0.21
DDX52-216ENST00000622140 C1QBPQ07021 282 aaKnown RBP13.72□□□□□ -0.21
DDX52-216ENST00000622140 CNKSR2Q8WXI2 1034 aa13.61□□□□□ -0.23
DDX52-216ENST00000622140 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
DDX52-216ENST00000622140 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
DDX52-216ENST00000622140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.25□□□□□ -0.29
DDX52-216ENST00000622140 POTEHQ6S545 545 aa13.15□□□□□ -0.3
DDX52-216ENST00000622140 NCBP3Q53F19 620 aaKnown RBP13.09□□□□□ -0.31
DDX52-216ENST00000622140 CAPN15O75808 1086 aa12.89□□□□□ -0.35
DDX52-216ENST00000622140 DSG3P32926 999 aa12.87□□□□□ -0.35
DDX52-216ENST00000622140 NPM3O75607 178 aaKnown RBP12.86□□□□□ -0.35
DDX52-216ENST00000622140 U3KPZ7 1027 aaPredicted RBP12.85□□□□□ -0.35
DDX52-216ENST00000622140 SPINK5Q9NQ38 1064 aaPredicted RBP12.84□□□□□ -0.35
DDX52-216ENST00000622140 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
DDX52-216ENST00000622140 ABCB7O75027 752 aa12.54□□□□□ -0.4
DDX52-216ENST00000622140 APLP2Q06481 763 aa12.51□□□□□ -0.41
DDX52-216ENST00000622140 ZNF219Q9P2Y4 722 aaPredicted RBP12.49□□□□□ -0.41
DDX52-216ENST00000622140 SLC4A2P04920 1241 aa12.4□□□□□ -0.42
DDX52-216ENST00000622140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.35□□□□□ -0.43
DDX52-216ENST00000622140 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
DDX52-216ENST00000622140 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
DDX52-216ENST00000622140 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
DDX52-216ENST00000622140 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
DDX52-216ENST00000622140 KCNA4P22459 653 aa12.16□□□□□ -0.46
DDX52-216ENST00000622140 POLA2Q14181 598 aa12.08□□□□□ -0.48
DDX52-216ENST00000622140 SP7Q8TDD2 431 aaPredicted RBP12.08□□□□□ -0.48
DDX52-216ENST00000622140 MYCNP04198 464 aaPredicted RBP11.94□□□□□ -0.5
DDX52-216ENST00000622140 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
DDX52-216ENST00000622140 PIP4P2Q8N4L2 257 aa11.85□□□□□ -0.51
DDX52-216ENST00000622140 HAX1O00165 279 aa11.82□□□□□ -0.52
DDX52-216ENST00000622140 REM2Q8IYK8 340 aaPredicted RBP11.81□□□□□ -0.52
DDX52-216ENST00000622140 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
DDX52-216ENST00000622140 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
DDX52-216ENST00000622140 PITPNM1O00562 1244 aa11.71□□□□□ -0.53
DDX52-216ENST00000622140 FXR2P51116 673 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDX52-216ENST00000622140 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
DDX52-216ENST00000622140 EVX2Q03828 476 aa11.56□□□□□ -0.56
DDX52-216ENST00000622140 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
DDX52-216ENST00000622140 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
DDX52-216ENST00000622140 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
DDX52-216ENST00000622140 SPDYE2BA6NHP3 402 aa11.38□□□□□ -0.59
DDX52-216ENST00000622140 SPDYE6P0CI01 402 aa11.38□□□□□ -0.59
DDX52-216ENST00000622140 SPDYE2Q495Y8 402 aa11.38□□□□□ -0.59
DDX52-216ENST00000622140 CLEC11AQ9Y240 323 aa11.36□□□□□ -0.59
DDX52-216ENST00000622140 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
DDX52-216ENST00000622140 LHX8Q68G74 356 aa11.33□□□□□ -0.6
DDX52-216ENST00000622140 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
DDX52-216ENST00000622140 FBLN2P98095 1184 aa11.31□□□□□ -0.6
DDX52-216ENST00000622140 GABBR2O75899 941 aa11.29□□□□□ -0.6
DDX52-216ENST00000622140 ATXN8OSP0DMR3 200 aa11.2□□□□□ -0.62
DDX52-216ENST00000622140 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
DDX52-216ENST00000622140 CHADLQ6NUI6 762 aa11.16□□□□□ -0.62
DDX52-216ENST00000622140 ZBTB22O15209 634 aa11.15□□□□□ -0.62
DDX52-216ENST00000622140 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
DDX52-216ENST00000622140 MKRN4PQ13434 485 aaPredicted RBP11.1□□□□□ -0.63
DDX52-216ENST00000622140 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
DDX52-216ENST00000622140 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
DDX52-216ENST00000622140 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
DDX52-216ENST00000622140 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
DDX52-216ENST00000622140 PABPN1Q86U42 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
DDX52-216ENST00000622140 CLCN6P51797 869 aa10.94□□□□□ -0.66
DDX52-216ENST00000622140 DCBLD2Q96PD2 775 aa10.94□□□□□ -0.66
DDX52-216ENST00000622140 FARP1Q9Y4F1 1045 aaPredicted RBP10.94□□□□□ -0.66
DDX52-216ENST00000622140 ZNF579Q8NAF0 562 aaKnown RBP10.8□□□□□ -0.68
DDX52-216ENST00000622140 ZRANB1Q9UGI0 708 aa10.79□□□□□ -0.68
DDX52-216ENST00000622140 OTUD5Q96G74 571 aa10.74□□□□□ -0.69
DDX52-216ENST00000622140 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
DDX52-216ENST00000622140 POTEMA6NI47 508 aa10.7□□□□□ -0.7
DDX52-216ENST00000622140 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
DDX52-216ENST00000622140 POTEGQ6S5H5 508 aa10.65□□□□□ -0.7
DDX52-216ENST00000622140 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
DDX52-216ENST00000622140 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
DDX52-216ENST00000622140 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
DDX52-216ENST00000622140 PHF12Q96QT6 1004 aa10.58□□□□□ -0.72
DDX52-216ENST00000622140 PCDH10Q9P2E7 1040 aa10.54□□□□□ -0.72
DDX52-216ENST00000622140 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
DDX52-216ENST00000622140 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
DDX52-216ENST00000622140 NPM1P06748 294 aaKnown RBP eCLIP10.48□□□□□ -0.73
DDX52-216ENST00000622140 MAMSTRQ6ZN01 415 aa10.45□□□□□ -0.74
DDX52-216ENST00000622140 SLC39A7Q92504 469 aa10.45□□□□□ -0.74
DDX52-216ENST00000622140 C7P10643 843 aa10.44□□□□□ -0.74
DDX52-216ENST00000622140 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms