RNA–Protein interactions for RNA: ENST00000621161.4

RAB11FIP4-211, Transcript of RAB11 family interacting protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB11FIP4, Length 8,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-211ENST00000621161 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
RAB11FIP4-211ENST00000621161 UNC80Q8N2C7 3258 aa11.15□□□□□ -0.62
RAB11FIP4-211ENST00000621161 DNAH14Q0VDD8 3507 aa11.14□□□□□ -0.63
RAB11FIP4-211ENST00000621161 ADGRG4Q8IZF6 3080 aa11.13□□□□□ -0.63
RAB11FIP4-211ENST00000621161 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
RAB11FIP4-211ENST00000621161 KRTAP10-8P60410 259 aa11.1□□□□□ -0.63
RAB11FIP4-211ENST00000621161 BOD1L1Q8NFC6 3051 aa11.09□□□□□ -0.63
RAB11FIP4-211ENST00000621161 VCANP13611 3396 aa11.08□□□□□ -0.64
RAB11FIP4-211ENST00000621161 FREM2Q5SZK8 3169 aa11.07□□□□□ -0.64
RAB11FIP4-211ENST00000621161 CELSR2Q9HCU4 2923 aa11.04□□□□□ -0.64
RAB11FIP4-211ENST00000621161 ZANQ9Y493 2812 aa11.04□□□□□ -0.64
RAB11FIP4-211ENST00000621161 USP34Q70CQ2 3546 aa11.03□□□□□ -0.64
RAB11FIP4-211ENST00000621161 DMXL2Q8TDJ6 3036 aa11.02□□□□□ -0.64
RAB11FIP4-211ENST00000621161 HIVEP1P15822 2718 aa11.01□□□□□ -0.65
RAB11FIP4-211ENST00000621161 COL12A1Q99715 3063 aa10.98□□□□□ -0.65
RAB11FIP4-211ENST00000621161 ATMQ13315 3056 aa10.98□□□□□ -0.65
RAB11FIP4-211ENST00000621161 NF1P21359 2839 aa10.96□□□□□ -0.66
RAB11FIP4-211ENST00000621161 Q6ZRN7 208 aaPredicted RBP10.91□□□□□ -0.66
RAB11FIP4-211ENST00000621161 PRO2289Q9P1D8 64 aa10.91□□□□□ -0.66
RAB11FIP4-211ENST00000621161 COL6A3P12111 3177 aa10.88□□□□□ -0.67
RAB11FIP4-211ENST00000621161 HRNRQ86YZ3 2850 aaPredicted RBP10.85□□□□□ -0.67
RAB11FIP4-211ENST00000621161 SZT2Q5T011 3432 aa10.83□□□□□ -0.68
RAB11FIP4-211ENST00000621161 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
RAB11FIP4-211ENST00000621161 DCHS2Q6V1P9 2916 aa10.81□□□□□ -0.68
RAB11FIP4-211ENST00000621161 REV3LO60673 3130 aa10.75□□□□□ -0.69
RAB11FIP4-211ENST00000621161 FBN2P35556 2912 aa10.74□□□□□ -0.69
RAB11FIP4-211ENST00000621161 SPTBN5Q9NRC6 3674 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP4-211ENST00000621161 KRTAP13-2Q52LG2 175 aa10.7□□□□□ -0.7
RAB11FIP4-211ENST00000621161 TENM3Q9P273 2699 aa10.67□□□□□ -0.7
RAB11FIP4-211ENST00000621161 H0YAA0 97 aa10.67□□□□□ -0.7
RAB11FIP4-211ENST00000621161 MXRA5Q9NR99 2828 aa10.65□□□□□ -0.7
RAB11FIP4-211ENST00000621161 DMXL1Q9Y485 3027 aa10.63□□□□□ -0.71
RAB11FIP4-211ENST00000621161 TENM1Q9UKZ4 2725 aa10.63□□□□□ -0.71
RAB11FIP4-211ENST00000621161 CFAP47Q6ZTR5 3102 aa10.63□□□□□ -0.71
RAB11FIP4-211ENST00000621161 CRYBG3Q68DQ2 2970 aa10.62□□□□□ -0.71
RAB11FIP4-211ENST00000621161 KRTAP13-1Q8IUC0 172 aa10.54□□□□□ -0.72
RAB11FIP4-211ENST00000621161 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
RAB11FIP4-211ENST00000621161 INE1O15225 51 aa10.52□□□□□ -0.72
RAB11FIP4-211ENST00000621161 EYSQ5T1H1 3165 aa10.52□□□□□ -0.73
RAB11FIP4-211ENST00000621161 KRTAP10-10P60014 251 aa10.51□□□□□ -0.73
RAB11FIP4-211ENST00000621161 TENM4Q6N022 2769 aa10.5□□□□□ -0.73
RAB11FIP4-211ENST00000621161 KRTAP7-1Q8IUC3 87 aa10.41□□□□□ -0.74
RAB11FIP4-211ENST00000621161 CELSR1Q9NYQ6 3014 aa10.4□□□□□ -0.74
RAB11FIP4-211ENST00000621161 LOC400499M0QZD8 3231 aa10.37□□□□□ -0.75
RAB11FIP4-211ENST00000621161 XP32Q5T750 250 aa10.37□□□□□ -0.75
RAB11FIP4-211ENST00000621161 TGP01266 2768 aa10.36□□□□□ -0.75
RAB11FIP4-211ENST00000621161 PDZD2O15018 2839 aa10.35□□□□□ -0.75
RAB11FIP4-211ENST00000621161 SPEGQ15772 3267 aa10.34□□□□□ -0.75
RAB11FIP4-211ENST00000621161 KRTAP12-2P59991 146 aa10.27□□□□□ -0.77
RAB11FIP4-211ENST00000621161 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
RAB11FIP4-211ENST00000621161 MYO15AQ9UKN7 3530 aa10.17□□□□□ -0.78
RAB11FIP4-211ENST00000621161 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
RAB11FIP4-211ENST00000621161 KRTAP13-4Q3LI77 160 aa10.07□□□□□ -0.8
RAB11FIP4-211ENST00000621161 KRTAP21-3Q3LHN1 58 aa10.04□□□□□ -0.8
RAB11FIP4-211ENST00000621161 VWFP04275 2813 aa10.04□□□□□ -0.8
RAB11FIP4-211ENST00000621161 PKD1L1Q8TDX9 2849 aa10.01□□□□□ -0.81
RAB11FIP4-211ENST00000621161 KRTAP15-1Q3LI76 137 aa9.94□□□□□ -0.82
RAB11FIP4-211ENST00000621161 KRTAP1-4P0C5Y4 121 aa9.92□□□□□ -0.82
RAB11FIP4-211ENST00000621161 SRRM2Q9UQ35 2752 aaKnown RBP9.88□□□□□ -0.83
RAB11FIP4-211ENST00000621161 KRTAP23-1A1A580 65 aa9.86□□□□□ -0.83
RAB11FIP4-211ENST00000621161 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
RAB11FIP4-211ENST00000621161 LAMA5O15230 3695 aa9.81□□□□□ -0.84
RAB11FIP4-211ENST00000621161 TENM2Q9NT68 2774 aa9.76□□□□□ -0.85
RAB11FIP4-211ENST00000621161 NBPF19A0A087WUL8 3843 aa9.76□□□□□ -0.85
RAB11FIP4-211ENST00000621161 FBN1P35555 2871 aaKnown RBP9.75□□□□□ -0.85
RAB11FIP4-211ENST00000621161 RELNP78509 3460 aa9.7□□□□□ -0.86
RAB11FIP4-211ENST00000621161 ASPMQ8IZT6 3477 aa9.69□□□□□ -0.86
RAB11FIP4-211ENST00000621161 KRTAP12-1P59990 96 aa9.68□□□□□ -0.86
RAB11FIP4-211ENST00000621161 DCHS1Q96JQ0 3298 aa9.65□□□□□ -0.87
RAB11FIP4-211ENST00000621161 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
RAB11FIP4-211ENST00000621161 COL7A1Q02388 2944 aa9.57□□□□□ -0.88
RAB11FIP4-211ENST00000621161 ZFHX4Q86UP3 3567 aa9.56□□□□□ -0.88
RAB11FIP4-211ENST00000621161 DMDP11532 3685 aa9.55□□□□□ -0.88
RAB11FIP4-211ENST00000621161 ZFHX3Q15911 3703 aa9.54□□□□□ -0.88
RAB11FIP4-211ENST00000621161 SMG1Q96Q15 3661 aaKnown RBP9.51□□□□□ -0.89
RAB11FIP4-211ENST00000621161 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
RAB11FIP4-211ENST00000621161 MEGF8Q7Z7M0 2845 aa9.46□□□□□ -0.89
RAB11FIP4-211ENST00000621161 FBN3Q75N90 2809 aa9.45□□□□□ -0.9
RAB11FIP4-211ENST00000621161 OTOGQ6ZRI0 2925 aa9.36□□□□□ -0.91
RAB11FIP4-211ENST00000621161 CRCT1Q9UGL9 99 aa9.33□□□□□ -0.92
RAB11FIP4-211ENST00000621161 TRRAPQ9Y4A5 3859 aa9.29□□□□□ -0.92
RAB11FIP4-211ENST00000621161 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
RAB11FIP4-211ENST00000621161 MUC3AQ02505 3323 aa9.17□□□□□ -0.94
RAB11FIP4-211ENST00000621161 KRTAP10-12P60413 245 aa9.17□□□□□ -0.94
RAB11FIP4-211ENST00000621161 VPS13CQ709C8 3753 aa9.14□□□□□ -0.95
RAB11FIP4-211ENST00000621161 BSNQ9UPA5 3926 aa9.14□□□□□ -0.95
RAB11FIP4-211ENST00000621161 KRTAP10-6P60371 365 aaPredicted RBP9.04□□□□□ -0.96
RAB11FIP4-211ENST00000621161 CUBNO60494 3623 aa9□□□□□ -0.97
RAB11FIP4-211ENST00000621161 KRTAP3-1Q9BYR8 98 aa8.95□□□□□ -0.98
RAB11FIP4-211ENST00000621161 AKAP9Q99996 3911 aa8.93□□□□□ -0.98
RAB11FIP4-211ENST00000621161 KRTAP12-3P60328 96 aa8.88□□□□□ -0.99
RAB11FIP4-211ENST00000621161 KRTAP10-5P60370 271 aa8.83□□□□□ -1
RAB11FIP4-211ENST00000621161 CSMD2Q7Z408 3487 aa8.69□□□□□ -1.02
RAB11FIP4-211ENST00000621161 ANK3Q12955 4377 aaKnown RBP8.57□□□□□ -1.04
RAB11FIP4-211ENST00000621161 LCE3AQ5TA76 89 aa8.54□□□□□ -1.04
RAB11FIP4-211ENST00000621161 ZNF469Q96JG9 3925 aaPredicted RBP8.5□□□□□ -1.05
RAB11FIP4-211ENST00000621161 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
RAB11FIP4-211ENST00000621161 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
RAB11FIP4-211ENST00000621161 KRTAP10-7P60409 375 aaPredicted RBP8.4□□□□□ -1.07
RAB11FIP4-211ENST00000621161 KRTAP3-3Q9BYR6 98 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms