RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 INE1O15225 51 aa1.77□□□□□ -2.13
NEB-220ENST00000618972 DCHS2Q6V1P9 2916 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 TNP1P09430 55 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 REV3LO60673 3130 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 KALRNO60229 2985 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 MGAQ8IWI9 3026 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 WWC2-AS2Q96NR7 200 aa1.76□□□□□ -2.13
NEB-220ENST00000618972 S4R3F8 94 aa1.75□□□□□ -2.13
NEB-220ENST00000618972 FRYQ5TBA9 3013 aa1.75□□□□□ -2.13
NEB-220ENST00000618972 C9orf92A6NGG3 77 aa1.74□□□□□ -2.13
NEB-220ENST00000618972 DNAH2Q9P225 4427 aa1.74□□□□□ -2.13
NEB-220ENST00000618972 BOD1L1Q8NFC6 3051 aa1.74□□□□□ -2.13
NEB-220ENST00000618972 APCP25054 2843 aa1.74□□□□□ -2.13
NEB-220ENST00000618972 KRTAP10-1P60331 282 aa1.73□□□□□ -2.13
NEB-220ENST00000618972 VPS13AQ96RL7 3174 aa1.73□□□□□ -2.13
NEB-220ENST00000618972 KRTAP10-2P60368 255 aa1.72□□□□□ -2.13
NEB-220ENST00000618972 DNAH1Q9P2D7 4330 aa1.72□□□□□ -2.13
NEB-220ENST00000618972 ITPR2Q14571 2701 aa1.72□□□□□ -2.13
NEB-220ENST00000618972 COL6A3P12111 3177 aa1.72□□□□□ -2.13
NEB-220ENST00000618972 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
NEB-220ENST00000618972 USP34Q70CQ2 3546 aa1.71□□□□□ -2.14
NEB-220ENST00000618972 SRRM2Q9UQ35 2752 aaKnown RBP1.7□□□□□ -2.14
NEB-220ENST00000618972 P0C880 135 aa1.7□□□□□ -2.14
NEB-220ENST00000618972 ANK3Q12955 4377 aaKnown RBP1.7□□□□□ -2.14
NEB-220ENST00000618972 TENM4Q6N022 2769 aa1.7□□□□□ -2.14
NEB-220ENST00000618972 LRBAP50851 2863 aa1.69□□□□□ -2.14
NEB-220ENST00000618972 HIVEP1P15822 2718 aa1.68□□□□□ -2.14
NEB-220ENST00000618972 KRTAP3-1Q9BYR8 98 aa1.68□□□□□ -2.14
NEB-220ENST00000618972 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
NEB-220ENST00000618972 ZZEF1O43149 2961 aa1.67□□□□□ -2.14
NEB-220ENST00000618972 ATMQ13315 3056 aa1.67□□□□□ -2.14
NEB-220ENST00000618972 SPTBN5Q9NRC6 3674 aaKnown RBP1.66□□□□□ -2.14
NEB-220ENST00000618972 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 DNAH11Q96DT5 4516 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 KRTAP21-3Q3LHN1 58 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 M0R2T5 61 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 DNAH10Q8IVF4 4471 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 KRTAP13-1Q8IUC0 172 aa1.66□□□□□ -2.14
NEB-220ENST00000618972 C10orf95Q9H7T3 257 aa1.65□□□□□ -2.15
NEB-220ENST00000618972 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.15
NEB-220ENST00000618972 MYO15AQ9UKN7 3530 aa1.65□□□□□ -2.15
NEB-220ENST00000618972 Q6ZRN7 208 aaPredicted RBP1.65□□□□□ -2.15
NEB-220ENST00000618972 KRTAP15-1Q3LI76 137 aa1.64□□□□□ -2.15
NEB-220ENST00000618972 KRTAP17-1Q9BYP8 105 aa1.64□□□□□ -2.15
NEB-220ENST00000618972 DCHS1Q96JQ0 3298 aa1.64□□□□□ -2.15
NEB-220ENST00000618972 DMXL1Q9Y485 3027 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 ADGRG4Q8IZF6 3080 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 APOBP04114 4563 aaKnown RBP1.63□□□□□ -2.15
NEB-220ENST00000618972 COL12A1Q99715 3063 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 SACSQ9NZJ4 4579 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 H0YAA0 97 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 Q5VSD8 79 aa1.63□□□□□ -2.15
NEB-220ENST00000618972 LAMA1P25391 3075 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 TENM1Q9UKZ4 2725 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 TPRXLQ17RH7 258 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 LOC400499M0QZD8 3231 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 KRTAP13-3Q3SY46 172 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 KRTAP10-8P60410 259 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 RELNP78509 3460 aa1.62□□□□□ -2.15
NEB-220ENST00000618972 OTOGQ6ZRI0 2925 aa1.61□□□□□ -2.15
NEB-220ENST00000618972 CSMD1Q96PZ7 3565 aa1.61□□□□□ -2.15
NEB-220ENST00000618972 KRTAP19-4Q3LI73 84 aa1.6□□□□□ -2.15
NEB-220ENST00000618972 FBN2P35556 2912 aa1.59□□□□□ -2.15
NEB-220ENST00000618972 FBN3Q75N90 2809 aa1.59□□□□□ -2.16
NEB-220ENST00000618972 ZFHX4Q86UP3 3567 aa1.58□□□□□ -2.16
NEB-220ENST00000618972 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
NEB-220ENST00000618972 DNHD1Q96M86 4753 aa1.58□□□□□ -2.16
NEB-220ENST00000618972 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
NEB-220ENST00000618972 EYSQ5T1H1 3165 aa1.58□□□□□ -2.16
NEB-220ENST00000618972 KRTAP12-2P59991 146 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 AKAP9Q99996 3911 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 PLECQ15149 4684 aaKnown RBP1.57□□□□□ -2.16
NEB-220ENST00000618972 DNAH5Q8TE73 4624 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 TGP01266 2768 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 KRTAP3-2Q9BYR7 98 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
NEB-220ENST00000618972 TENM2Q9NT68 2774 aa1.57□□□□□ -2.16
NEB-220ENST00000618972 CELSR1Q9NYQ6 3014 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 SVEP1Q4LDE5 3571 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 KRTAP1-4P0C5Y4 121 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 SMG1Q96Q15 3661 aaKnown RBP1.56□□□□□ -2.16
NEB-220ENST00000618972 MEGF8Q7Z7M0 2845 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 XP32Q5T750 250 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 CMYA5Q8N3K9 4069 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 ZFHX3Q15911 3703 aa1.56□□□□□ -2.16
NEB-220ENST00000618972 ZANQ9Y493 2812 aa1.55□□□□□ -2.16
NEB-220ENST00000618972 WDFY3Q8IZQ1 3526 aa1.55□□□□□ -2.16
NEB-220ENST00000618972 VWFP04275 2813 aa1.55□□□□□ -2.16
NEB-220ENST00000618972 ASPMQ8IZT6 3477 aa1.54□□□□□ -2.16
NEB-220ENST00000618972 COL7A1Q02388 2944 aa1.54□□□□□ -2.16
NEB-220ENST00000618972 NBPF19A0A087WUL8 3843 aa1.54□□□□□ -2.16
NEB-220ENST00000618972 MT3P25713 68 aa1.54□□□□□ -2.16
NEB-220ENST00000618972 KRTAP10-6P60371 365 aaPredicted RBP1.53□□□□□ -2.16
NEB-220ENST00000618972 VPS13DQ5THJ4 4388 aa1.53□□□□□ -2.16
NEB-220ENST00000618972 A0A1B0GVY2 172 aa1.53□□□□□ -2.17
NEB-220ENST00000618972 KRTAP3-3Q9BYR6 98 aa1.52□□□□□ -2.17
NEB-220ENST00000618972 LORP23490 312 aaPredicted RBP1.51□□□□□ -2.17
NEB-220ENST00000618972 FRAS1Q86XX4 4008 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms