RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 MAP1AP78559 2803 aaPredicted RBP8.96□□□□□ -0.98
CNTNAP3B-214ENST00000618777 TEX15Q9BXT5 2789 aa8.96□□□□□ -0.98
CNTNAP3B-214ENST00000618777 Q6ZRN7 208 aaPredicted RBP8.95□□□□□ -0.98
CNTNAP3B-214ENST00000618777 CFAP47Q6ZTR5 3102 aa8.92□□□□□ -0.98
CNTNAP3B-214ENST00000618777 LOC400499M0QZD8 3231 aa8.92□□□□□ -0.98
CNTNAP3B-214ENST00000618777 TEP1Q99973 2627 aaKnown RBP8.92□□□□□ -0.98
CNTNAP3B-214ENST00000618777 ADGRG4Q8IZF6 3080 aa8.9□□□□□ -0.98
CNTNAP3B-214ENST00000618777 ITPR1Q14643 2758 aa8.9□□□□□ -0.99
CNTNAP3B-214ENST00000618777 ASPMQ8IZT6 3477 aa8.87□□□□□ -0.99
CNTNAP3B-214ENST00000618777 KALRNO60229 2985 aa8.86□□□□□ -0.99
CNTNAP3B-214ENST00000618777 BAHCC1Q9P281 2608 aa8.85□□□□□ -0.99
CNTNAP3B-214ENST00000618777 DMXL2Q8TDJ6 3036 aa8.83□□□□□ -1
CNTNAP3B-214ENST00000618777 DCHS1Q96JQ0 3298 aa8.83□□□□□ -1
CNTNAP3B-214ENST00000618777 KRTAP10-8P60410 259 aa8.82□□□□□ -1
CNTNAP3B-214ENST00000618777 TACC2O95359 2948 aa8.81□□□□□ -1
CNTNAP3B-214ENST00000618777 ZFHX4Q86UP3 3567 aa8.78□□□□□ -1
CNTNAP3B-214ENST00000618777 DMDP11532 3685 aa8.77□□□□□ -1
CNTNAP3B-214ENST00000618777 NSD1Q96L73 2696 aaPredicted RBP8.77□□□□□ -1.01
CNTNAP3B-214ENST00000618777 ATMQ13315 3056 aa8.76□□□□□ -1.01
CNTNAP3B-214ENST00000618777 SETXQ7Z333 2677 aaKnown RBP8.75□□□□□ -1.01
CNTNAP3B-214ENST00000618777 MUC3AQ02505 3323 aa8.73□□□□□ -1.01
CNTNAP3B-214ENST00000618777 IGSF10Q6WRI0 2623 aa8.72□□□□□ -1.01
CNTNAP3B-214ENST00000618777 LRBAP50851 2863 aa8.69□□□□□ -1.02
CNTNAP3B-214ENST00000618777 ZNF292O60281 2723 aa8.66□□□□□ -1.02
CNTNAP3B-214ENST00000618777 ZZEF1O43149 2961 aa8.62□□□□□ -1.03
CNTNAP3B-214ENST00000618777 UBR5O95071 2799 aaPredicted RBP8.62□□□□□ -1.03
CNTNAP3B-214ENST00000618777 LAMA5O15230 3695 aa8.62□□□□□ -1.03
CNTNAP3B-214ENST00000618777 DMXL1Q9Y485 3027 aa8.61□□□□□ -1.03
CNTNAP3B-214ENST00000618777 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
CNTNAP3B-214ENST00000618777 APCP25054 2843 aa8.55□□□□□ -1.04
CNTNAP3B-214ENST00000618777 SMG1Q96Q15 3661 aaKnown RBP8.52□□□□□ -1.05
CNTNAP3B-214ENST00000618777 COL12A1Q99715 3063 aa8.5□□□□□ -1.05
CNTNAP3B-214ENST00000618777 KRTAP13-3Q3SY46 172 aa8.5□□□□□ -1.05
CNTNAP3B-214ENST00000618777 RELNP78509 3460 aa8.5□□□□□ -1.05
CNTNAP3B-214ENST00000618777 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
CNTNAP3B-214ENST00000618777 TNRC18O15417 2968 aaPredicted RBP8.46□□□□□ -1.06
CNTNAP3B-214ENST00000618777 XP32Q5T750 250 aa8.45□□□□□ -1.06
CNTNAP3B-214ENST00000618777 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
CNTNAP3B-214ENST00000618777 ASH1LQ9NR48 2969 aaKnown RBP8.45□□□□□ -1.06
CNTNAP3B-214ENST00000618777 UTP20O75691 2785 aaKnown RBP8.44□□□□□ -1.06
CNTNAP3B-214ENST00000618777 KRTAP15-1Q3LI76 137 aa8.4□□□□□ -1.06
CNTNAP3B-214ENST00000618777 SVEP1Q4LDE5 3571 aa8.35□□□□□ -1.07
CNTNAP3B-214ENST00000618777 KMT2BQ9UMN6 2715 aaPredicted RBP8.34□□□□□ -1.07
CNTNAP3B-214ENST00000618777 KRTAP12-2P59991 146 aa8.34□□□□□ -1.07
CNTNAP3B-214ENST00000618777 FLNCQ14315 2725 aa8.29□□□□□ -1.08
CNTNAP3B-214ENST00000618777 ITPR2Q14571 2701 aa8.29□□□□□ -1.08
CNTNAP3B-214ENST00000618777 SPENQ96T58 3664 aaKnown RBP8.27□□□□□ -1.09
CNTNAP3B-214ENST00000618777 INE1O15225 51 aa8.26□□□□□ -1.09
CNTNAP3B-214ENST00000618777 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
CNTNAP3B-214ENST00000618777 A0A1B0GVY2 172 aa8.24□□□□□ -1.09
CNTNAP3B-214ENST00000618777 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
CNTNAP3B-214ENST00000618777 HIVEP1P15822 2718 aa8.24□□□□□ -1.09
CNTNAP3B-214ENST00000618777 DCHS2Q6V1P9 2916 aa8.23□□□□□ -1.09
CNTNAP3B-214ENST00000618777 HRNRQ86YZ3 2850 aaPredicted RBP8.22□□□□□ -1.09
CNTNAP3B-214ENST00000618777 CUBNO60494 3623 aa8.22□□□□□ -1.09
CNTNAP3B-214ENST00000618777 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
CNTNAP3B-214ENST00000618777 KRTAP12-1P59990 96 aa8.2□□□□□ -1.1
CNTNAP3B-214ENST00000618777 TGP01266 2768 aa8.17□□□□□ -1.1
CNTNAP3B-214ENST00000618777 NIPBLQ6KC79 2804 aaeCLIP8.16□□□□□ -1.1
CNTNAP3B-214ENST00000618777 CRYBG3Q68DQ2 2970 aa8.16□□□□□ -1.1
CNTNAP3B-214ENST00000618777 CELSR1Q9NYQ6 3014 aa8.15□□□□□ -1.1
CNTNAP3B-214ENST00000618777 FBN2P35556 2912 aa8.09□□□□□ -1.11
CNTNAP3B-214ENST00000618777 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
CNTNAP3B-214ENST00000618777 NF1P21359 2839 aa8.06□□□□□ -1.12
CNTNAP3B-214ENST00000618777 CELSR2Q9HCU4 2923 aa7.99□□□□□ -1.13
CNTNAP3B-214ENST00000618777 TENM3Q9P273 2699 aa7.98□□□□□ -1.13
CNTNAP3B-214ENST00000618777 MXRA5Q9NR99 2828 aa7.92□□□□□ -1.14
CNTNAP3B-214ENST00000618777 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CNTNAP3B-214ENST00000618777 KRTAP10-6P60371 365 aaPredicted RBP7.89□□□□□ -1.15
CNTNAP3B-214ENST00000618777 TENM4Q6N022 2769 aa7.87□□□□□ -1.15
CNTNAP3B-214ENST00000618777 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
CNTNAP3B-214ENST00000618777 TENM1Q9UKZ4 2725 aa7.79□□□□□ -1.16
CNTNAP3B-214ENST00000618777 CSMD2Q7Z408 3487 aa7.75□□□□□ -1.17
CNTNAP3B-214ENST00000618777 TENM2Q9NT68 2774 aa7.75□□□□□ -1.17
CNTNAP3B-214ENST00000618777 PDZD2O15018 2839 aa7.7□□□□□ -1.18
CNTNAP3B-214ENST00000618777 ZFHX3Q15911 3703 aa7.66□□□□□ -1.18
CNTNAP3B-214ENST00000618777 VPS13CQ709C8 3753 aa7.65□□□□□ -1.19
CNTNAP3B-214ENST00000618777 SRRM2Q9UQ35 2752 aaKnown RBP7.61□□□□□ -1.19
CNTNAP3B-214ENST00000618777 KRTAP21-3Q3LHN1 58 aa7.56□□□□□ -1.2
CNTNAP3B-214ENST00000618777 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
CNTNAP3B-214ENST00000618777 VWFP04275 2813 aa7.51□□□□□ -1.21
CNTNAP3B-214ENST00000618777 NBPF19A0A087WUL8 3843 aa7.49□□□□□ -1.21
CNTNAP3B-214ENST00000618777 KRTAP23-1A1A580 65 aa7.48□□□□□ -1.21
CNTNAP3B-214ENST00000618777 KRTAP3-3Q9BYR6 98 aa7.36□□□□□ -1.23
CNTNAP3B-214ENST00000618777 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
CNTNAP3B-214ENST00000618777 PKD1L1Q8TDX9 2849 aa7.35□□□□□ -1.23
CNTNAP3B-214ENST00000618777 KRTAP10-12P60413 245 aa7.28□□□□□ -1.24
CNTNAP3B-214ENST00000618777 OTOGQ6ZRI0 2925 aa7.27□□□□□ -1.25
CNTNAP3B-214ENST00000618777 TRRAPQ9Y4A5 3859 aa7.23□□□□□ -1.25
CNTNAP3B-214ENST00000618777 KRTAP12-3P60328 96 aa7.21□□□□□ -1.26
CNTNAP3B-214ENST00000618777 ZNF469Q96JG9 3925 aaPredicted RBP7.19□□□□□ -1.26
CNTNAP3B-214ENST00000618777 MEGF8Q7Z7M0 2845 aa7.09□□□□□ -1.27
CNTNAP3B-214ENST00000618777 CRCT1Q9UGL9 99 aa7.07□□□□□ -1.28
CNTNAP3B-214ENST00000618777 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
CNTNAP3B-214ENST00000618777 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
CNTNAP3B-214ENST00000618777 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
CNTNAP3B-214ENST00000618777 AKAP9Q99996 3911 aa7.02□□□□□ -1.29
CNTNAP3B-214ENST00000618777 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
CNTNAP3B-214ENST00000618777 KRTAP10-5P60370 271 aa6.87□□□□□ -1.31
CNTNAP3B-214ENST00000618777 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms