RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 PELP1Q8IZL8 1130 aaKnown RBP27.35■■□□□ 1.97
CNTNAP3B-214ENST00000618777 MYT1Q01538 1121 aa27.34■■□□□ 1.97
CNTNAP3B-214ENST00000618777 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
CNTNAP3B-214ENST00000618777 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
CNTNAP3B-214ENST00000618777 ERICH6Q7L0X2 663 aa25.83■■□□□ 1.73
CNTNAP3B-214ENST00000618777 CENPBP07199 599 aaPredicted RBP25.77■■□□□ 1.72
CNTNAP3B-214ENST00000618777 CCER1Q8TC90 406 aaPredicted RBP25.69■■□□□ 1.7
CNTNAP3B-214ENST00000618777 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
CNTNAP3B-214ENST00000618777 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.64
CNTNAP3B-214ENST00000618777 PCGF6Q9BYE7 350 aa25.31■■□□□ 1.64
CNTNAP3B-214ENST00000618777 EHMT2Q96KQ7 1210 aa25.1■■□□□ 1.61
CNTNAP3B-214ENST00000618777 APLP2Q06481 763 aa25.06■■□□□ 1.6
CNTNAP3B-214ENST00000618777 NEFLP07196 543 aa24.96■■□□□ 1.59
CNTNAP3B-214ENST00000618777 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
CNTNAP3B-214ENST00000618777 HRCP23327 699 aa24.78■■□□□ 1.56
CNTNAP3B-214ENST00000618777 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
CNTNAP3B-214ENST00000618777 FAM9AQ8IZU1 332 aaPredicted RBP24.44■■□□□ 1.5
CNTNAP3B-214ENST00000618777 DAXXQ9UER7 740 aaPredicted RBP24.34■■□□□ 1.49
CNTNAP3B-214ENST00000618777 RTL5Q5HYW3 569 aaPredicted RBP24.16■■□□□ 1.46
CNTNAP3B-214ENST00000618777 TRIM26Q12899 539 aaPredicted RBP24.07■■□□□ 1.44
CNTNAP3B-214ENST00000618777 PPARGC1BQ86YN6 1023 aaKnown RBP24.05■■□□□ 1.44
CNTNAP3B-214ENST00000618777 GTF3C3Q9Y5Q9 886 aa24■■□□□ 1.43
CNTNAP3B-214ENST00000618777 NISCHQ9Y2I1 1504 aa23.98■■□□□ 1.43
CNTNAP3B-214ENST00000618777 TRIM41Q8WV44 630 aa23.92■■□□□ 1.42
CNTNAP3B-214ENST00000618777 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
CNTNAP3B-214ENST00000618777 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
CNTNAP3B-214ENST00000618777 GLIPR1L2Q4G1C9 344 aa23.71■■□□□ 1.39
CNTNAP3B-214ENST00000618777 EIF5BO60841 1220 aaKnown RBP23.69■■□□□ 1.38
CNTNAP3B-214ENST00000618777 UBTFP17480 764 aaKnown RBP23.67■■□□□ 1.38
CNTNAP3B-214ENST00000618777 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
CNTNAP3B-214ENST00000618777 DIEXFQ68CQ4 756 aaKnown RBP23.65■■□□□ 1.38
CNTNAP3B-214ENST00000618777 ATP1B4Q9UN42 357 aaPredicted RBP23.57■■□□□ 1.36
CNTNAP3B-214ENST00000618777 MYT1LQ9UL68 1186 aa23.47■■□□□ 1.35
CNTNAP3B-214ENST00000618777 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
CNTNAP3B-214ENST00000618777 CDK11AQ9UQ88 783 aaPredicted RBP23.39■■□□□ 1.33
CNTNAP3B-214ENST00000618777 BCANQ96GW7 911 aa23.31■■□□□ 1.32
CNTNAP3B-214ENST00000618777 POLR3GLQ9BT43 218 aa23.28■■□□□ 1.32
CNTNAP3B-214ENST00000618777 BCL11AQ9H165 835 aa23.25■■□□□ 1.31
CNTNAP3B-214ENST00000618777 SCAF1Q9H7N4 1312 aaKnown RBP23.24■■□□□ 1.31
CNTNAP3B-214ENST00000618777 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
CNTNAP3B-214ENST00000618777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.14■■□□□ 1.3
CNTNAP3B-214ENST00000618777 ITGAEP38570 1179 aa23.08■■□□□ 1.29
CNTNAP3B-214ENST00000618777 ANP32EQ9BTT0 268 aa23.08■■□□□ 1.29
CNTNAP3B-214ENST00000618777 ANP32AP39687 249 aaKnown RBP23.07■■□□□ 1.28
CNTNAP3B-214ENST00000618777 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
CNTNAP3B-214ENST00000618777 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
CNTNAP3B-214ENST00000618777 CHIC1Q5VXU3 224 aa22.95■■□□□ 1.26
CNTNAP3B-214ENST00000618777 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
CNTNAP3B-214ENST00000618777 ANP32CO43423 234 aa22.89■■□□□ 1.25
CNTNAP3B-214ENST00000618777 ANP32BQ92688 251 aaKnown RBP22.81■■□□□ 1.24
CNTNAP3B-214ENST00000618777 NBR1Q14596 966 aa22.74■■□□□ 1.23
CNTNAP3B-214ENST00000618777 ZBTB47Q9UFB7 747 aaPredicted RBP22.69■■□□□ 1.22
CNTNAP3B-214ENST00000618777 NPM2Q86SE8 214 aaKnown RBP22.68■■□□□ 1.22
CNTNAP3B-214ENST00000618777 FKBP8Q14318 412 aa22.63■■□□□ 1.21
CNTNAP3B-214ENST00000618777 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
CNTNAP3B-214ENST00000618777 CANXP27824 592 aaKnown RBP22.49■■□□□ 1.19
CNTNAP3B-214ENST00000618777 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
CNTNAP3B-214ENST00000618777 RTN4Q9NQC3 1192 aaKnown RBP22.4■■□□□ 1.18
CNTNAP3B-214ENST00000618777 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
CNTNAP3B-214ENST00000618777 HSP90AA1P07900 732 aaKnown RBP22.37■■□□□ 1.17
CNTNAP3B-214ENST00000618777 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
CNTNAP3B-214ENST00000618777 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
CNTNAP3B-214ENST00000618777 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
CNTNAP3B-214ENST00000618777 NEFMP07197 916 aa22.24■■□□□ 1.15
CNTNAP3B-214ENST00000618777 CDK11BP21127 795 aaKnown RBP22.23■■□□□ 1.15
CNTNAP3B-214ENST00000618777 DEKP35659 375 aaKnown RBP22.21■■□□□ 1.15
CNTNAP3B-214ENST00000618777 CCDC136Q96JN2 1154 aa22.21■■□□□ 1.15
CNTNAP3B-214ENST00000618777 HNRNPUQ00839 825 aaKnown RBP eCLIP22.19■■□□□ 1.14
CNTNAP3B-214ENST00000618777 CSRNP3Q8WYN3 585 aa22.19■■□□□ 1.14
CNTNAP3B-214ENST00000618777 NAP1L5Q96NT1 182 aaPredicted RBP22.19■■□□□ 1.14
CNTNAP3B-214ENST00000618777 ARXQ96QS3 562 aa22.19■■□□□ 1.14
CNTNAP3B-214ENST00000618777 ZNF326Q5BKZ1 582 aaKnown RBP22.15■■□□□ 1.14
CNTNAP3B-214ENST00000618777 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
CNTNAP3B-214ENST00000618777 PRKCSHP14314 528 aaPredicted RBP22.14■■□□□ 1.13
CNTNAP3B-214ENST00000618777 NCLP19338 710 aaKnown RBP22.12■■□□□ 1.13
CNTNAP3B-214ENST00000618777 DDRGK1Q96HY6 314 aa22.07■■□□□ 1.12
CNTNAP3B-214ENST00000618777 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.07■■□□□ 1.12
CNTNAP3B-214ENST00000618777 PPM1GO15355 546 aaPredicted RBP22.02■■□□□ 1.12
CNTNAP3B-214ENST00000618777 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.99■■□□□ 1.11
CNTNAP3B-214ENST00000618777 MIER1Q8N108 512 aa21.98■■□□□ 1.11
CNTNAP3B-214ENST00000618777 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.11
CNTNAP3B-214ENST00000618777 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
CNTNAP3B-214ENST00000618777 BECN1Q14457 450 aa21.94■■□□□ 1.1
CNTNAP3B-214ENST00000618777 DDX10Q13206 875 aaKnown RBP21.93■■□□□ 1.1
CNTNAP3B-214ENST00000618777 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
CNTNAP3B-214ENST00000618777 SUPT16HQ9Y5B9 1047 aaKnown RBP21.87■■□□□ 1.09
CNTNAP3B-214ENST00000618777 GOLGA6L22H0YM25 854 aa21.85■■□□□ 1.09
CNTNAP3B-214ENST00000618777 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
CNTNAP3B-214ENST00000618777 IRX6P78412 446 aaPredicted RBP21.81■■□□□ 1.08
CNTNAP3B-214ENST00000618777 AMER1Q5JTC6 1135 aaPredicted RBP21.8■■□□□ 1.08
CNTNAP3B-214ENST00000618777 VSIG10Q8N0Z9 540 aa21.79■■□□□ 1.08
CNTNAP3B-214ENST00000618777 TONSLQ96HA7 1378 aa21.79■■□□□ 1.08
CNTNAP3B-214ENST00000618777 RBM19Q9Y4C8 960 aaKnown RBP21.79■■□□□ 1.08
CNTNAP3B-214ENST00000618777 DNTTIP2Q5QJE6 756 aaKnown RBP21.78■■□□□ 1.08
CNTNAP3B-214ENST00000618777 PTMAP06454 111 aaKnown RBP21.77■■□□□ 1.08
CNTNAP3B-214ENST00000618777 TMC1Q8TDI8 760 aa21.75■■□□□ 1.07
CNTNAP3B-214ENST00000618777 LAS1LQ9Y4W2 734 aaKnown RBP21.74■■□□□ 1.07
CNTNAP3B-214ENST00000618777 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
CNTNAP3B-214ENST00000618777 SALL2Q9Y467 1007 aaPredicted RBP21.7■■□□□ 1.06
CNTNAP3B-214ENST00000618777 PODXL2Q9NZ53 605 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms