RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 DMXL1Q9Y485 3027 aa6.08□□□□□ -1.44
POLR2A-209ENST00000617998 NF1P21359 2839 aa6.08□□□□□ -1.44
POLR2A-209ENST00000617998 ASB16-AS1Q495Z4 193 aa6.08□□□□□ -1.44
POLR2A-209ENST00000617998 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
POLR2A-209ENST00000617998 XP32Q5T750 250 aa6.06□□□□□ -1.44
POLR2A-209ENST00000617998 LUZP6Q538Z0 58 aa6.06□□□□□ -1.44
POLR2A-209ENST00000617998 H3BS24 57 aa6.05□□□□□ -1.44
POLR2A-209ENST00000617998 KRTAP4-16G5E9R7 235 aaPredicted RBP6.05□□□□□ -1.44
POLR2A-209ENST00000617998 CELSR2Q9HCU4 2923 aa6.05□□□□□ -1.44
POLR2A-209ENST00000617998 Q5XG85 94 aa6.03□□□□□ -1.44
POLR2A-209ENST00000617998 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
POLR2A-209ENST00000617998 DCHS2Q6V1P9 2916 aa6.02□□□□□ -1.45
POLR2A-209ENST00000617998 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
POLR2A-209ENST00000617998 CELSR3Q9NYQ7 3312 aa5.99□□□□□ -1.45
POLR2A-209ENST00000617998 CFAP47Q6ZTR5 3102 aa5.98□□□□□ -1.45
POLR2A-209ENST00000617998 KRTAP13-1Q8IUC0 172 aa5.98□□□□□ -1.45
POLR2A-209ENST00000617998 PRO2289Q9P1D8 64 aa5.98□□□□□ -1.45
POLR2A-209ENST00000617998 USP34Q70CQ2 3546 aa5.97□□□□□ -1.45
POLR2A-209ENST00000617998 MXRA5Q9NR99 2828 aa5.97□□□□□ -1.45
POLR2A-209ENST00000617998 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
POLR2A-209ENST00000617998 KRTAP1-4P0C5Y4 121 aa5.95□□□□□ -1.46
POLR2A-209ENST00000617998 Q1T7F1 81 aa5.95□□□□□ -1.46
POLR2A-209ENST00000617998 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
POLR2A-209ENST00000617998 SPTBN5Q9NRC6 3674 aaKnown RBP5.94□□□□□ -1.46
POLR2A-209ENST00000617998 OCR1Q9BZK8 76 aa5.91□□□□□ -1.46
POLR2A-209ENST00000617998 NOTCH2NLQ7Z3S9 236 aa5.9□□□□□ -1.47
POLR2A-209ENST00000617998 ADGRG4Q8IZF6 3080 aa5.9□□□□□ -1.47
POLR2A-209ENST00000617998 KRTAP13-3Q3SY46 172 aa5.88□□□□□ -1.47
POLR2A-209ENST00000617998 ZANQ9Y493 2812 aa5.88□□□□□ -1.47
POLR2A-209ENST00000617998 FREM2Q5SZK8 3169 aa5.86□□□□□ -1.47
POLR2A-209ENST00000617998 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
POLR2A-209ENST00000617998 SPEGQ15772 3267 aa5.84□□□□□ -1.47
POLR2A-209ENST00000617998 VWFP04275 2813 aa5.81□□□□□ -1.48
POLR2A-209ENST00000617998 FBN2P35556 2912 aa5.81□□□□□ -1.48
POLR2A-209ENST00000617998 TNP1P09430 55 aa5.79□□□□□ -1.48
POLR2A-209ENST00000617998 A0A0A0MQY5 61 aa5.79□□□□□ -1.48
POLR2A-209ENST00000617998 MUC3AQ02505 3323 aa5.78□□□□□ -1.48
POLR2A-209ENST00000617998 DNAH14Q0VDD8 3507 aa5.78□□□□□ -1.48
POLR2A-209ENST00000617998 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
POLR2A-209ENST00000617998 NBPF19A0A087WUL8 3843 aa5.76□□□□□ -1.49
POLR2A-209ENST00000617998 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
POLR2A-209ENST00000617998 PDZD2O15018 2839 aa5.76□□□□□ -1.49
POLR2A-209ENST00000617998 Q5VV11 94 aa5.74□□□□□ -1.49
POLR2A-209ENST00000617998 CELSR1Q9NYQ6 3014 aa5.74□□□□□ -1.49
POLR2A-209ENST00000617998 ZFHX3Q15911 3703 aa5.73□□□□□ -1.49
POLR2A-209ENST00000617998 OTOGQ6ZRI0 2925 aa5.7□□□□□ -1.5
POLR2A-209ENST00000617998 TGP01266 2768 aa5.7□□□□□ -1.5
POLR2A-209ENST00000617998 DCHS1Q96JQ0 3298 aa5.7□□□□□ -1.5
POLR2A-209ENST00000617998 LINC01558Q9Y6Z2 57 aa5.69□□□□□ -1.5
POLR2A-209ENST00000617998 ROMO1P60602 79 aa5.66□□□□□ -1.5
POLR2A-209ENST00000617998 MYO15AQ9UKN7 3530 aa5.66□□□□□ -1.5
POLR2A-209ENST00000617998 KRTAP4-5Q9BYR2 181 aa5.66□□□□□ -1.5
POLR2A-209ENST00000617998 HRNRQ86YZ3 2850 aaPredicted RBP5.64□□□□□ -1.51
POLR2A-209ENST00000617998 A6NN06 94 aa5.6□□□□□ -1.51
POLR2A-209ENST00000617998 SRRM2Q9UQ35 2752 aaKnown RBP5.6□□□□□ -1.51
POLR2A-209ENST00000617998 DMDP11532 3685 aa5.58□□□□□ -1.52
POLR2A-209ENST00000617998 LOC400499M0QZD8 3231 aa5.57□□□□□ -1.52
POLR2A-209ENST00000617998 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
POLR2A-209ENST00000617998 FBN1P35555 2871 aaKnown RBP5.55□□□□□ -1.52
POLR2A-209ENST00000617998 NDUFAF8A1L188 74 aa5.48□□□□□ -1.53
POLR2A-209ENST00000617998 A8MU10 97 aa5.48□□□□□ -1.53
POLR2A-209ENST00000617998 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
POLR2A-209ENST00000617998 RELNP78509 3460 aa5.44□□□□□ -1.54
POLR2A-209ENST00000617998 WDFY3Q8IZQ1 3526 aa5.4□□□□□ -1.55
POLR2A-209ENST00000617998 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
POLR2A-209ENST00000617998 ASPMQ8IZT6 3477 aa5.39□□□□□ -1.55
POLR2A-209ENST00000617998 LAMA5O15230 3695 aa5.37□□□□□ -1.55
POLR2A-209ENST00000617998 ANK3Q12955 4377 aaKnown RBP5.31□□□□□ -1.56
POLR2A-209ENST00000617998 C10orf95Q9H7T3 257 aa5.31□□□□□ -1.56
POLR2A-209ENST00000617998 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
POLR2A-209ENST00000617998 PP632Q6XCG6 107 aa5.29□□□□□ -1.56
POLR2A-209ENST00000617998 ZFHX4Q86UP3 3567 aa5.26□□□□□ -1.57
POLR2A-209ENST00000617998 P0C880 135 aa5.24□□□□□ -1.57
POLR2A-209ENST00000617998 LORP23490 312 aaPredicted RBP5.24□□□□□ -1.57
POLR2A-209ENST00000617998 H0YAA0 97 aa5.2□□□□□ -1.58
POLR2A-209ENST00000617998 ALMS1Q8TCU4 4167 aa5.18□□□□□ -1.58
POLR2A-209ENST00000617998 SMG1Q96Q15 3661 aaKnown RBP5.17□□□□□ -1.58
POLR2A-209ENST00000617998 CSMD2Q7Z408 3487 aa5.13□□□□□ -1.59
POLR2A-209ENST00000617998 KRTAP10-4P60372 401 aaPredicted RBP5.13□□□□□ -1.59
POLR2A-209ENST00000617998 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
POLR2A-209ENST00000617998 BSNQ9UPA5 3926 aa5.08□□□□□ -1.6
POLR2A-209ENST00000617998 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
POLR2A-209ENST00000617998 CRCT1Q9UGL9 99 aa5.04□□□□□ -1.6
POLR2A-209ENST00000617998 MEGF8Q7Z7M0 2845 aa5.01□□□□□ -1.61
POLR2A-209ENST00000617998 SPENQ96T58 3664 aaKnown RBP5.01□□□□□ -1.61
POLR2A-209ENST00000617998 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
POLR2A-209ENST00000617998 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
POLR2A-209ENST00000617998 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
POLR2A-209ENST00000617998 KRTAP17-1Q9BYP8 105 aa4.95□□□□□ -1.62
POLR2A-209ENST00000617998 DNHD1Q96M86 4753 aa4.95□□□□□ -1.62
POLR2A-209ENST00000617998 KRTAP10-12P60413 245 aa4.91□□□□□ -1.62
POLR2A-209ENST00000617998 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
POLR2A-209ENST00000617998 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
POLR2A-209ENST00000617998 KRTAP10-6P60371 365 aaPredicted RBP4.88□□□□□ -1.63
POLR2A-209ENST00000617998 MT1HP80294 61 aa4.86□□□□□ -1.63
POLR2A-209ENST00000617998 KRTAP12-2P59991 146 aa4.86□□□□□ -1.63
POLR2A-209ENST00000617998 KRTAP3-1Q9BYR8 98 aa4.8□□□□□ -1.64
POLR2A-209ENST00000617998 DNAH9Q9NYC9 4486 aa4.79□□□□□ -1.64
POLR2A-209ENST00000617998 SVEP1Q4LDE5 3571 aa4.79□□□□□ -1.64
POLR2A-209ENST00000617998 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms