RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 UNC80Q8N2C7 3258 aa1.81□□□□□ -2.12
LPP-220ENST00000617246 DMXL2Q8TDJ6 3036 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 KRTAP13-2Q52LG2 175 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 SPTBN5Q9NRC6 3674 aaKnown RBP1.8□□□□□ -2.12
LPP-220ENST00000617246 DNAH14Q0VDD8 3507 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 LINC00472Q9H8W2 130 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 KRTAP11-1Q8IUC1 163 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 HTTP42858 3142 aa1.8□□□□□ -2.12
LPP-220ENST00000617246 CHD9Q3L8U1 2897 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 CDH23Q9H251 3354 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 CHD7Q9P2D1 2997 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 LAMA3Q16787 3333 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 APCP25054 2843 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 BRCA2P51587 3418 aa1.79□□□□□ -2.12
LPP-220ENST00000617246 KRTAP4-16G5E9R7 235 aaPredicted RBP1.78□□□□□ -2.12
LPP-220ENST00000617246 KRTAP13-3Q3SY46 172 aa1.78□□□□□ -2.12
LPP-220ENST00000617246 WDFY4Q6ZS81 3184 aa1.78□□□□□ -2.12
LPP-220ENST00000617246 KALRNO60229 2985 aa1.78□□□□□ -2.12
LPP-220ENST00000617246 FRYQ5TBA9 3013 aa1.78□□□□□ -2.12
LPP-220ENST00000617246 TACC2O95359 2948 aa1.78□□□□□ -2.12
LPP-220ENST00000617246 CELSR3Q9NYQ7 3312 aa1.77□□□□□ -2.13
LPP-220ENST00000617246 ADGRG4Q8IZF6 3080 aa1.77□□□□□ -2.13
LPP-220ENST00000617246 LINC01558Q9Y6Z2 57 aa1.77□□□□□ -2.13
LPP-220ENST00000617246 NBPF19A0A087WUL8 3843 aa1.76□□□□□ -2.13
LPP-220ENST00000617246 ATMQ13315 3056 aa1.76□□□□□ -2.13
LPP-220ENST00000617246 CFAP47Q6ZTR5 3102 aa1.76□□□□□ -2.13
LPP-220ENST00000617246 C10orf95Q9H7T3 257 aa1.75□□□□□ -2.13
LPP-220ENST00000617246 MYO15AQ9UKN7 3530 aa1.75□□□□□ -2.13
LPP-220ENST00000617246 BOD1L1Q8NFC6 3051 aa1.75□□□□□ -2.13
LPP-220ENST00000617246 KRTAP13-1Q8IUC0 172 aa1.75□□□□□ -2.13
LPP-220ENST00000617246 LAMA1P25391 3075 aa1.75□□□□□ -2.13
LPP-220ENST00000617246 ZFHX4Q86UP3 3567 aa1.74□□□□□ -2.13
LPP-220ENST00000617246 COL12A1Q99715 3063 aa1.74□□□□□ -2.13
LPP-220ENST00000617246 VCANP13611 3396 aa1.73□□□□□ -2.13
LPP-220ENST00000617246 CRYBG3Q68DQ2 2970 aa1.73□□□□□ -2.13
LPP-220ENST00000617246 KRTAP1-4P0C5Y4 121 aa1.73□□□□□ -2.13
LPP-220ENST00000617246 COL6A3P12111 3177 aa1.73□□□□□ -2.13
LPP-220ENST00000617246 KRTAP25-1Q3LHN0 102 aa1.73□□□□□ -2.13
LPP-220ENST00000617246 WDFY3Q8IZQ1 3526 aa1.72□□□□□ -2.13
LPP-220ENST00000617246 SMG1Q96Q15 3661 aaKnown RBP1.72□□□□□ -2.13
LPP-220ENST00000617246 TENM1Q9UKZ4 2725 aa1.72□□□□□ -2.13
LPP-220ENST00000617246 DNAH1Q9P2D7 4330 aa1.72□□□□□ -2.13
LPP-220ENST00000617246 REV3LO60673 3130 aa1.72□□□□□ -2.13
LPP-220ENST00000617246 VPS13CQ709C8 3753 aa1.71□□□□□ -2.14
LPP-220ENST00000617246 FRAS1Q86XX4 4008 aa1.71□□□□□ -2.14
LPP-220ENST00000617246 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
LPP-220ENST00000617246 NIPBLQ6KC79 2804 aaeCLIP1.71□□□□□ -2.14
LPP-220ENST00000617246 ANK2Q01484 3957 aa1.7□□□□□ -2.14
LPP-220ENST00000617246 HUWE1Q7Z6Z7 4374 aaKnown RBP1.7□□□□□ -2.14
LPP-220ENST00000617246 FLNCQ14315 2725 aa1.7□□□□□ -2.14
LPP-220ENST00000617246 SPEGQ15772 3267 aa1.7□□□□□ -2.14
LPP-220ENST00000617246 DMXL1Q9Y485 3027 aa1.7□□□□□ -2.14
LPP-220ENST00000617246 NF1P21359 2839 aa1.7□□□□□ -2.14
LPP-220ENST00000617246 ZZEF1O43149 2961 aa1.68□□□□□ -2.14
LPP-220ENST00000617246 TENM3Q9P273 2699 aa1.67□□□□□ -2.14
LPP-220ENST00000617246 DCHS2Q6V1P9 2916 aa1.67□□□□□ -2.14
LPP-220ENST00000617246 PDZD2O15018 2839 aa1.67□□□□□ -2.14
LPP-220ENST00000617246 FBN2P35556 2912 aa1.66□□□□□ -2.14
LPP-220ENST00000617246 ZANQ9Y493 2812 aa1.66□□□□□ -2.14
LPP-220ENST00000617246 DNAH6Q9C0G6 4158 aa1.66□□□□□ -2.14
LPP-220ENST00000617246 H0YAA0 97 aa1.65□□□□□ -2.14
LPP-220ENST00000617246 DCHS1Q96JQ0 3298 aa1.65□□□□□ -2.14
LPP-220ENST00000617246 SRRM2Q9UQ35 2752 aaKnown RBP1.65□□□□□ -2.14
LPP-220ENST00000617246 DNAH7Q8WXX0 4024 aa1.65□□□□□ -2.14
LPP-220ENST00000617246 SVEP1Q4LDE5 3571 aa1.65□□□□□ -2.15
LPP-220ENST00000617246 MXRA5Q9NR99 2828 aa1.65□□□□□ -2.15
LPP-220ENST00000617246 KRTAP8-1Q8IUC2 63 aa1.64□□□□□ -2.15
LPP-220ENST00000617246 MYCBP2O75592 4640 aa1.64□□□□□ -2.15
LPP-220ENST00000617246 TENM2Q9NT68 2774 aa1.64□□□□□ -2.15
LPP-220ENST00000617246 EYSQ5T1H1 3165 aa1.64□□□□□ -2.15
LPP-220ENST00000617246 VPS13DQ5THJ4 4388 aa1.64□□□□□ -2.15
LPP-220ENST00000617246 LCE2DQ5TA82 110 aaPredicted RBP1.64□□□□□ -2.15
LPP-220ENST00000617246 KRTAP10-7P60409 375 aaPredicted RBP1.63□□□□□ -2.15
LPP-220ENST00000617246 LOC400499M0QZD8 3231 aa1.63□□□□□ -2.15
LPP-220ENST00000617246 KRTAP10-6P60371 365 aaPredicted RBP1.63□□□□□ -2.15
LPP-220ENST00000617246 DNAH11Q96DT5 4516 aa1.62□□□□□ -2.15
LPP-220ENST00000617246 DYNC2H1Q8NCM8 4307 aaKnown RBP1.62□□□□□ -2.15
LPP-220ENST00000617246 ASPMQ8IZT6 3477 aa1.62□□□□□ -2.15
LPP-220ENST00000617246 KRTAP10-12P60413 245 aa1.61□□□□□ -2.15
LPP-220ENST00000617246 KRTAP3-3Q9BYR6 98 aa1.61□□□□□ -2.15
LPP-220ENST00000617246 KRTAP3-2Q9BYR7 98 aa1.61□□□□□ -2.15
LPP-220ENST00000617246 KRTAP15-1Q3LI76 137 aa1.61□□□□□ -2.15
LPP-220ENST00000617246 CMYA5Q8N3K9 4069 aa1.61□□□□□ -2.15
LPP-220ENST00000617246 BSNQ9UPA5 3926 aa1.6□□□□□ -2.15
LPP-220ENST00000617246 LAMA5O15230 3695 aa1.6□□□□□ -2.15
LPP-220ENST00000617246 CUBNO60494 3623 aa1.6□□□□□ -2.15
LPP-220ENST00000617246 DNAH2Q9P225 4427 aa1.6□□□□□ -2.15
LPP-220ENST00000617246 DNAH17Q9UFH2 4485 aa1.6□□□□□ -2.15
LPP-220ENST00000617246 COL7A1Q02388 2944 aa1.59□□□□□ -2.15
LPP-220ENST00000617246 VWFP04275 2813 aa1.59□□□□□ -2.15
LPP-220ENST00000617246 TRRAPQ9Y4A5 3859 aa1.59□□□□□ -2.15
LPP-220ENST00000617246 TGP01266 2768 aa1.58□□□□□ -2.16
LPP-220ENST00000617246 CELSR1Q9NYQ6 3014 aa1.58□□□□□ -2.16
LPP-220ENST00000617246 LORP23490 312 aaPredicted RBP1.58□□□□□ -2.16
LPP-220ENST00000617246 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
LPP-220ENST00000617246 DNAH9Q9NYC9 4486 aa1.58□□□□□ -2.16
LPP-220ENST00000617246 DNAH8Q96JB1 4490 aa1.58□□□□□ -2.16
LPP-220ENST00000617246 APOBP04114 4563 aaKnown RBP1.57□□□□□ -2.16
LPP-220ENST00000617246 KRTAP12-2P59991 146 aa1.57□□□□□ -2.16
LPP-220ENST00000617246 HECTD4Q9Y4D8 3996 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms